Oncorhynchus gorbuscha (pink salmon): 124003329
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Entry
124003329 CDS
T07892
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1 isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124003329 (ap5b1)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
124003329 (ap5b1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
DUF190
Motif
Other DBs
NCBI-GeneID:
124003329
NCBI-ProteinID:
XP_046167439
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All DBs
Position
LG18:49327085..49330921
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AA seq
964 aa
AA seq
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MSANWPERISAFLRSPSQFLCSTTSDIFLAEVLHELRDDRASDHIKVLLLSPLLEHPTLL
CPSVFVGEETALELMSVFAQCSPKSLPFRCHLLLALTSVLLCSCCVSSHTSASQDFLDLL
LQMAQDTNDAQAGAALHPLRTTACDCLRELEACLPGLLSQRLELLSSLRQQENSRLHQAY
TGLHALALRNAVYLLTQQKGAGAGDLKTALGSNEGFVWGEGADSAQPNSESHSDLALFSP
LTLGTMGKVPSLQTGLDCKELRSLLSSLLEESYLLTSLSQAALLRRLVEVLAMVPAVSPT
IFRAQLLRLLGTCKLCLLHTTLLMKAAFTDSLFSAEDETFLLKRLVGLSQHPLLSTPEKL
FYMDCILHFPENRPISSGDESLPVLLTPRLAAALVPTVFNDSVSMLARLNLLSLVYLEEG
EEDREGQGGRGLAYLYDHLTSLLRIVENQASREMVVTFFRASFLFLLHFCHVERYSEDLS
QRLCDLYLRRTRLAPHLINLADRTQDRLEESGWAVALLRALQRTITEAPLSQLTLQDLRW
HLRILARVAEEGEVLQRATLNFLLCVITSSSSALCVSGDWRLGNSVLGVCRRLLLHPSLD
SLLTPLADLLQHLTCHYGETDIQDHARLYYTLLTTLSQEKLAGVLAQRGTERGRQAKVRS
LSAIMGENEELTSGLTVHQTERPLLRLVKLDKHEPDECRPEHKPDSEPACETESSPGQGG
IEDYRAQFQSSSFASEITLQYHLTHTGVHDPHFDKLFSIRLHFDLTDGHYEEVSDISVPC
LFRTRKPPTVRLRLKPKQPYHTTLRASAIFTTEDGLSWHSPLADLHVAFPEVFLPLLTPL
GWAREKKQRVFEGIWGEICSGQSEGDLTNTATSLFCDQLEDSAVGELVEKYFQRYLVSDL
DKGRCKVLFFLPPQSHVLLKVITEEDAVQVHIATDNWKLLPYINSYLDDITKEIHSTQQV
NGDV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaactggccggagaggatctccgcatttttgcgcagtccgtcccagttcttg
tgcagcacgacatcggacatcttcctcgctgaggtcctgcacgagctgcgagatgacagg
gccagtgaccacatcaaggtcctgctgttgtccccactacttgagcaccctactctgctg
tgcccctctgtctttgtgggcgaggagaccgccctggagctcatgtctgtgtttgcccag
tgctcccccaaatccctcccgttccgctgccaccttctcctggccctcacctccgtgctc
ctctgctcctgctgtgttagttcacacaccagcgcctcccaagacttcctggaccttctc
ttacagatggcccaggacaccaacgacgcacaggctggggctgcattacacccattgagg
acaacagcctgcgactgccttagggagctagaggcttgcctcccgggcctactatcccaa
cgcttggagctcctgagcagcctgaggcagcaggaaaactccaggcttcaccaggcctac
acggggctccatgccctggccctgaggaatgctgtgtatctgctcacccagcagaaaggg
gctggggctggagacctgaagactgcactggggagcaacgaggggtttgtgtggggggag
ggtgcagactccgcacaaccgaactctgagtcacactcagacttggccctcttctcgccc
ctcactctgggcaccatgggaaaagttccttccctgcagacgggcctagactgtaaagag
ctgagatcgctactctcctccctcttagaggagtcctacctgctcacatccctatcccag
gctgccctgctgcgacggctggtggaggtgcttgccatggtgcccgcagtctccccaacg
atattcagggcacagctgctgcgtctattgggcacatgcaagttgtgtcttcttcatacc
actctgctgatgaaggctgctttcacagacagcctgttcagcgcagaggatgaaaccttc
cttctaaagcgtctcgtcggcctgtcccaacaccccctactgagcacgcctgagaagctc
ttctacatggactgcatcctgcacttcccagagaaccgacctatcagtagtggcgacgag
agcctgcccgtgctcttgacccctcggctggccgcagccctagtgcccactgtgttcaat
gatagtgtcagcatgctggctagactgaacctactctctctggtctacctggaggaagga
gaagaagacagggagggacagggggggagaggcctggcctacctgtacgatcacctaacc
tcccttctccgtatcgtggagaaccaggccagtagggagatggtggtgaccttcttcagg
gcttccttcctcttcctccttcacttctgccacgtggagcgctactctgaggacctgtct
cagaggctgtgtgacctgtacctcagacgcactcggctggctcctcacctcatcaacctg
gctgaccggacccaggaccggctggaggagtcaggctgggctgtggcactgcttagagcc
ctgcaaagaaccatcacagaggccccgctgtcccagctcaccttgcaagacctccgctgg
cacctcaggatcctggcccgcgtggcagaggaaggggaagtcctccagagggccactctc
aactttctgctgtgcgtcatcacttcctcttcatccgcgctgtgtgtgagcggggactgg
cgtctggggaacagcgtgctgggggtgtgtcgacgcctgctcctgcaccccagcttagac
tcccttctcacaccgctggctgatctcctacagcacctcacctgccattatggtgaaaca
gacatccaggaccacgcccgcttgtactacaccctcctcaccactctttcccaggagaag
ctggctggggtgttagcacagaggggaacagaaagggggcggcaggccaaagtgcgctcg
ctgtctgccatcatgggtgagaacgaggaactgaccagcggtctgaccgtgcaccagaca
gagcgaccgctgctgaggttggtcaaactggacaaacatgaaccagacgaatgcagacca
gagcataaaccagacagtgaaccagcctgtgagactgagagttccccaggacagggtggg
atagaggactacagagcccagttccagagttccagcttcgcctctgaaatcaccctccaa
taccacctcacacacactggagttcacgacccccatttcgacaagctcttcagcatccgc
ttgcactttgatctcacagacggccactatgaggaagtgagtgacatcagcgtgccttgc
ctgttcaggaccaggaagccccctacagtgaggctgaggctgaagcccaagcagccgtac
cacaccaccctgagagctagcgccatcttcaccacggaggacggcctctcctggcactcc
ccgctggcagacctacatgtggccttccctgaggtgtttctgcccctcctcacaccccta
gggtgggccagggaaaagaagcagagggtgtttgaggggatctggggtgaaatatgctca
gggcagtctgagggggatttgaccaacactgcaactagcctgttctgtgatcagttggag
gattcggctgtgggtgagctggtggagaagtactttcagagatatctggtctcagacttg
gataaaggcaggtgtaaagtgctcttcttcctcccaccccagtctcacgtgctgctgaag
gttatcacagaggaggatgccgtccaggttcatattgctacagacaactggaagcttctg
ccttatattaactcttatctagatgacattaccaaagagattcacagcacacagcaagtc
aatggtgatgtctga
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