Oncorhynchus gorbuscha (pink salmon): 124003356
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Entry
124003356 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-X-like
KO
K05718
integrin alpha L
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
ogo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124003356
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124003356
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124003356
04515 Cell adhesion molecules [BR:
ogo04515
]
124003356
04090 CD molecules [BR:
ogo04090
]
124003356
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124003356
Cell adhesion molecules [BR:
ogo04515
]
Integrins
Integrin alpha subunits
124003356
CD molecules [BR:
ogo04090
]
Proteins
124003356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
FG-GAP_3
FG-GAP_2
Copine
Motif
Other DBs
NCBI-GeneID:
124003356
NCBI-ProteinID:
XP_046167489
LinkDB
All DBs
Position
LG18:complement(14531275..14558955)
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AA seq
1202 aa
AA seq
DB search
MLVNKVKEKMSRQGPLSLLTWMGAMAVSSMAFNIDEANPKIYKGEEKDFFGYKVLQFISG
QDKGVMVSAPYQKNGSGGICRCALDRTDCTDCYTPQETDTIKYIGLSMAGQSTSPPTFTA
CSPGLAHECDGNSYLNSICYQFNSQLQITSNFTPAFQECTKKIVDLVFLFDGSGSMTTEE
FDKNKGFIDNIMTTLKNSSIKFAAVQFSSIARTVFNFNDYKEGRALTNLWKEKHMSSLTN
THQAIDFLLKNIFENQAAGATEDATKVLVIITDGDPSDTDKRFNSINRSDDKNIIRFVIG
VKNVDLTKLKSLASEPKENNTFLIQDYNGLKGILDNLQKKIFNIEGSKTALAGNLTKEMS
QSGFSAVYVNKDTLVLGSVGSNNWRGSLFETEGLRSEEREIQDPTLDKDSYMGYSVAVGK
KNENLLYFTGAPRSEHMGRILLFNKVNNNWTVAQRLSGEQMGSYFGAELCSVDIDSDGNT
DFLLVGAPMFHQPPREGRIYVYILTDKLELRMEMNVSVLVQGRFGSSISSLTDLNGDELK
DVAVGAPLEDDHRGAVYIYLGEKLKGIRPEFSQRISAARMRSKLQFFGQTIDGKMDLGED
GLTDIVVGTRGAVVVLRSRPVLSISAHLHFHPSEISTDNFDCLAKETISPVVTLTACFNM
AEATKSKAGVLSAGMNVSYTLDVDPVRQRSRAFYNDTNKGARSSLSTVELRKEQTCFNHS
VYMTQCVIDTLSPIIIQLTFFQSESQQEGCTAILNTDSSAKAVVEVPFEKNCKENETCLA
ELEVDFNFITSTLLVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGLSFAMMHLLKSTRR
TVFSCGGLEGEMDRTTCSVSLPVYRSKTTAVFTSKFHILNTYDWKDTMEMTVIGLSDNGN
STNSSLTRTIPVQFAVDLVAKALPQDSTTYMNFTLEDTSPKRLVNVYEVQNLGFKSVPIT
VTFTFPTKLEHRFEMKDYEISVLQNHTQCGKVINSTTEYCSPEKYCKSIECESFLLEKFL
TVTFVLSGNVSFKDLEQHAKSLSLPKKFTGDRETVNFISLVKLSYDKKQYAQTASDPGDN
STSFHQTQIDDQAEIIIHPQGELILGTGVGVGLFLLIIITMAMYMLGCFKRKRLVDNAQE
DENEGEQREQDDAVQPITEKKLEPESGAVESNSLLDDSQTENNGFPTCEAVGEGPKEEQD
VV
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgaacaaagtgaaggagaagatgtccaggcagggacccctctccctgctcacc
tggatgggagccatggctgtctcttcaatggctttcaacatagatgaagcaaaccccaaa
atctacaagggagaggaaaaggatttctttggttacaaagttctgcaattcatatctggc
caagacaaaggggtaatggtcagtgctccatatcagaagaacggatctggtggaatctgt
agatgtgctctagacagaacagactgtacagactgttacacacctcaagaaactgacaca
atcaagtacattggactgtctatggctggacaatctacttctcctccaacattcactgcc
tgcagccctggtctggcacacgagtgtgatgggaactcctatctgaacagtatctgttat
cagttcaacagccagctccagatcacctcgaacttcacacctgccttccaagaatgtact
aagaaaatagtcgacctcgttttcctctttgacggatcaggaagcatgacaacggaggaa
tttgataagaacaaaggtttcatagacaatatcatgacaaccctaaaaaactcctcaatc
aagtttgcagcggttcagttctcatcaatagccaggacagttttcaacttcaatgactac
aaagaggggagagccttgactaatctttggaaagaaaagcacatgtctagtctaaccaac
acacatcaggcgatagactttcttttgaaaaacatttttgaaaaccaagccgccggcgcc
accgaggatgcaactaaagtactggtcataataacagatggagatcccagtgatactgat
aaaaggtttaactctatcaacagaagtgatgacaaaaacatcatccgtttcgttattggg
gtcaagaatgtcgatttgacgaaactaaagtcactagcatcagagccaaaagagaacaac
actttcctcatccaggactacaacggactaaaaggaatcctagacaacttacaaaaaaag
atcttcaacattgaaggttccaagactgctctggctggaaacttgacgaaagagatgtct
cagagtgggtttagtgctgtctacgttaataaggataccttggttctgggctcagtgggg
tcaaacaactggcgtggatctctctttgagactgagggtctgagatccgaggaaagggaa
attcaggaccccacattggacaaagactcctatatgggatactctgtagctgttgggaag
aagaacgagaaccttctatattttaccggagcaccaagatctgaacacatgggacggatt
ctacttttcaacaaggttaacaacaactggactgtggcacaaagattgtctggagaacag
atgggctcctactttggggcagagctgtgttctgtggacatagactcagacggcaacaca
gacttcctcctggtcggtgcaccaatgtttcaccaaccaccgagagagggcaggatctac
gtctacatactaactgataagctggaactgaggatggagatgaatgtttcagtgctggtt
cagggtagattcggctcctccatctcctctctcacagacctgaatggagatgagctgaag
gatgtagctgtgggcgctccacttgaggacgatcacaggggggccgtgtacatctacctg
ggtgaaaagctaaagggaatccgccctgaattcagccagcgcatctcagctgcgaggatg
agatctaagctccagttctttggccagacgattgatgggaagatggacctgggtgaggat
ggactgactgatatcgtagtaggaacgcgtggcgcagttgtcgtcttgaggtcccgaccg
gtcctcagcatctctgctcatctccacttccatccctctgagatcagcactgataacttt
gactgtctggcaaaagagaccatttcccctgtggtgactttgacagcctgctttaacatg
gcagaggcaacaaagagtaaagctggggtgctgagtgcagggatgaacgtctcctacacg
ctggatgtggatccagtgagacagaggagccgagccttttacaatgacacgaacaaagga
gccagaagttctctctctactgtggagctgagaaaggagcagacctgcttcaaccactca
gtctacatgacacaatgcgtgattgacacattatcgcccataatcatccaacttacattt
tttcaatctgaaagccaacaagagggttgtactgccattctgaatactgacagttctgca
aaggctgtggtcgaggtgccctttgaaaagaactgcaaagaaaatgaaacctgtttggca
gagcttgaggtggacttcaacttcatcacatcaactttattagtggtggaccaaagttac
tttaatgtgactataagactgtccaatcacggggatgactcctataacaccagtctaacc
ctcctctaccctcctggcctctcattcgccatgatgcatcttctgaagtccacaaggaga
acagtattcagctgtggtggtctggaaggtgaaatggacagaactacatgcagtgtcagc
ctccctgtctaccgtagtaaaactaccgctgtgttcaccagtaaattccatattttgaat
acatacgactggaaggacacaatggagatgaccgtcattggactgagcgacaatggaaac
tcaaccaatagttccctaacccggaccatccctgttcaatttgcagttgacctggtagca
aaagcccttccccaagactccaccacttacatgaactttactctggaggacacatcacct
aaaagactggtgaatgtatatgaggtgcagaacttgggatttaagtctgtacccatcaca
gtcaccttcactttcccaactaagcttgagcacagatttgaaatgaaggactacgaaata
tctgtcttacagaaccacactcaatgtggaaaggttatcaattcaacaacagagtactgc
tctccagaaaaatattgcaagtccatcgagtgtgaaagtttccttttggagaagtttttg
acagttacatttgtgctgtctggaaatgtttccttcaaggacctcgaacaacatgcaaag
agcttgtcattgccaaagaaattcactggggacagagaaactgtcaacttcatcagttta
gtcaaactcagctatgacaaaaaacaatatgctcagacagcgagtgacccaggggacaac
tctacaagcttccaccaaacacagattgatgaccaggctgagatcatcattcatccacaa
ggagagctgatactagggacaggagttggagtaggactttttctcctgatcatcatcaca
atggccatgtatatgctgggatgtttcaagagaaaaaggcttgttgataatgcacaggaa
gatgagaatgaaggggaacagagggagcaagatgacgctgttcagcctataacagagaaa
aagctagagcctgagagtggagcagtggagtcaaattctctccttgacgacagtcaaaca
gaaaacaatggcttccccacttgtgaggcggtaggggagggaccaaaagaagaacaggat
gtagtgtaa
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