Oncorhynchus gorbuscha (pink salmon): 124003390
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Entry
124003390 CDS
T07892
Name
(RefSeq) syntaxin-16-like isoform X1
KO
K08489
syntaxin 16
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124003390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124003390
Membrane trafficking [BR:
ogo04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
124003390
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Ortholog
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GFIT
Motif
Pfam:
SNARE
Syntaxin_2
MCPsignal
UCH_1
Fusion_gly
Orf78
DUF2116
DUF6548
Motif
Other DBs
NCBI-GeneID:
124003390
NCBI-ProteinID:
XP_046167556
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All DBs
Position
LG18:complement(42323170..42335295)
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AA seq
323 aa
AA seq
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MATRRLTDAFLLMRNNAIQNRQILAEQVSTYDPRRTLSTRSNAAELDELADDRMALVSGI
SLDPEAAVGVTKRLPPKWVDGVVEIQYEITRVRQKMKELAALHDKHMNRPTLDDSSEEEH
AIEITTQEITQMFHRCQRAVTGLQTRCGHCTEQEERLLRNVVSSLAGSLQELSTNFRHTQ
SSYLKRMKNREERSKHFFDSGPLMEEDEDLALYEMGFTDDQLVLVEQNTVMVEEREREVR
QIVQSITDLNEIFRDLAGMVVEQGTVLDRIDFNVEQSCVKTDEGLKQLQKAEQYQKKNRK
MLVILILTVIVVVLILILFGTKF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaggcgcctgaccgatgccttcttattaatgcggaacaatgccatccaaaat
cggcagatattggctgagcaagtgagtacatacgacccccgtcgtactctgagtacacgt
agcaatgctgcggagcttgatgagttggctgatgaccgcatggccttggtctcagggatc
agtctggacccagaagctgccgtcggagtcaccaagagactgccgcccaagtgggtagat
ggggtcgttgagattcagtatgaaatcacacgggtccggcagaaaatgaaggagctggcc
gccctccatgacaagcacatgaaccgccctaccctcgatgacagcagtgaagaggagcat
gccatagagatcaccactcaggagatcacacagatgttccaccggtgtcagcgtgcagtg
acaggtctgcagactcgctgtggccactgcaccgagcaggaggagaggctgctgagaaat
gtggtgtcctcattggcagggagcctgcaagagctctccaccaacttcagacacacgcag
tccagctatctgaaacgcatgaagaatcgtgaggagagatccaaacacttttttgactct
ggtcctctaatggaggaggatgaagacctggcactatatgaaatggggtttacagatgac
cagctggtcctggtagagcagaacacagtgatggtggaggaacgtgagagagaggtccga
cagatagtccagtccatcaccgacctgaatgagattttccgagacctggcaggaatggtg
gtggaacagggcacagtacttgacagaattgacttcaatgtggagcaatcgtgtgtcaaa
acagatgaggggttaaaacagttacaaaaggctgaacagtatcagaagaaaaaccgaaag
atgctggttattttaattcttactgttatagttgttgttctaatacttattctatttggg
accaagttctag
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