Oncorhynchus gorbuscha (pink salmon): 124003414
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Entry
124003414 CDS
T07892
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04110
Cell cycle
ogo04218
Cellular senescence
ogo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124003414 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124003414 (rbl1)
04218 Cellular senescence
124003414 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124003414 (rbl1)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
124003414 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
124003414
NCBI-ProteinID:
XP_046167615
LinkDB
All DBs
Position
LG18:complement(32638787..32697467)
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AA seq
1074 aa
AA seq
DB search
MRGDESDSDSGRTDESSVRKSLEMLCQELNMDEQTASEAMQNFKSIWNTYTLEGEVVHWL
ACSLYAACRKGSTPTVGKGVMEGNCVSLTRILRTSKLSLIQFFNKMKKWSDMSNLSQEFR
NRMGRLERTFEVSTVIFRKFEPIFMDMFQDPQGEPPRQPRSRKHRRLPCHVSDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCSNRKDLVNPLFKGMPSIFRLENN
TPDEPPCVIDRLCELHDGLVVEAKGIKEHYFKPYIKRLFERQILKGNEELLTDLLDTPNF
IDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKAAPEPRACQLSARMQVESNL
QQHFEKKRTLAPSTPLTGRRYLKEKELLVTPVSSATQSVSRLQSMVSGLRSAPSEALMQI
FKSCSRDPIVAILSRVKTLGETFKQHYTKDSEELPGSHMDFAENRMKLAEILYYKILENV
MAQETRRLHGKDMAVLLEQDIFHCSLMACCLEVVLFAYSSQRTFPWIISIFKLRPFYFFK
VAVINENLFSTGLPGEIKVIEVFIRSEEGLSRDMVKHLNSIEEQVLECRAWTADSVLWEA
LEQAHNKVPTVEEVNFPSSFDTGNSNAGPSHLPLVALSPIIHPRIREFRTGLSSARKDIP
PSPLSVHDRYSSPAAGSAKRRLFGDDSSSQAQQSPSLAKRIMFTPGGTLKIDTPTILNMT
TANGQQLSIPLQGIKNDLGGITLIQVQTRGEPGSPITAQVLLTASPSRPIPAPQAQPDPQ
QSRPRRTGSLALFFRKVYHLASVRLRDLCVRLDISAELRGKIWTCFEHSIVQCPELMKDR
HLDQLLLCAIYIISKITKEGHTFQDIMKCYRSQPQASSHVYRSVLIRPSSTREQPSDENM
EVDPSGGTSLISAAEKADQSSREEALAQGEERGDLIQFYNSVYVLKIKGFALRYAAPSMD
NRMEAPPLSPFPSMRAQPLSPRRISQRHSIYVSPHKNGSCLTPNSAYTYKINGSPSKELT
DINRMIRQGGVSRKRAFSMEGDYLGESPTKRVCPESEDVLLKRLQDVVSERAHH
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagacgagtcagattccgactccgggcggacggacgagagctccgtccgaaag
agcttggaaatgctttgtcaggagctaaatatggacgaacagacggcatctgaagccatg
caaaacttcaagtcgatttggaatacatacacactggagggggaagtagttcattggcta
gcctgctctctctatgcagcctgcagaaagggctccactcccactgtgggtaagggggtg
atggaaggcaactgtgtgtccctgactcgaatactcaggacgtcaaaactgagtttgatt
cagttcttcaacaagatgaagaaatggtcggatatgtccaacttatctcaggaatttcgg
aatcgcatgggccgcctggagagaacctttgaagtgtcaactgtgatctttcggaagttt
gagcccatattcatggacatgttccaggatcctcaaggggagcccccacgacagcctaga
agcagaaaacacaggcgcctgccatgtcacgtcagcgatgtattcaaattctgctggacc
ctgtttgtgtacactaaaggaaatttccgtatgattggtgatgacttggtgaactcatac
cacctcctgctctgctgcttggacttggtgtttggaaatgccctgctatgctccaacagg
aaagaccttgtcaacccacttttcaaaggcatgcccagcatcttcaggttggaaaacaac
accccggacgagccgccatgtgtcatcgatcggctgtgtgagctacacgatggcttggtg
gtggaggccaagggcatcaaggagcactacttcaagccctacattaaaaggctctttgag
cggcagatacttaaagggaatgaggagctgctcactgatcttctggacacaccaaatttc
atagataacaataaagcgataaaccgggagtatgaggagtatgtgctgactgtgggggac
tttgatgagagggtgttcctgggggcggatgccgatgaggagattgggacacccaggaag
gctgcaccagaaccccgggcctgccagctgtcagcccgcatgcaggtggagagcaacctg
caacagcactttgagaagaagcgcaccctggccccctccactcctttgacaggcagacgt
tacctgaaggagaaggagctactggtgacccctgtgtcctcggccacgcaaagcgtcagc
cgactccagagcatggtctcgggcctgcgtagcgcccccagcgaggccctgatgcagata
ttcaagtcatgttcgcgggaccccatcgtagccattctgagcagagtgaaaaccctgggc
gagacgttcaagcaacattacacaaaggactcagaggagctgcctggatcacacatggat
tttgctgagaacaggatgaagctggctgaaatcctctattacaagatccttgagaacgtc
atggcccaagagacaaggaggctacacggcaaagacatggctgtgctgctggagcaggac
atcttccactgctctctgatggcctgctgtctggaggtggtgctgtttgcctacagctcc
cagcgcaccttcccctggatcatcagcatcttcaaactacgaccgttctacttcttcaag
gtcgcagttataaatgagaacttgttctcaaccggcctacctggtgaaataaaggtgatt
gaggtgttcatccgctcagaagagggtctgtcccgggacatggtgaagcacctgaactcc
atcgaagagcaggtgctggagtgccgggcctggacagcagactctgtgctgtgggaggcc
ctggagcaggctcacaacaaggtccccaccgtggaggaggtgaacttccctagtagtttt
gacacggggaacagcaatgctggtccctcccacctccctctggtggccctctcccccatt
atccaccctcgcatccgcgagtttaggacgggcctgagcagcgcacgcaaagacattcct
ccatcgcccttatccgtccacgaccgttacagctccccggcggcaggcagtgccaagcgg
cgtctgtttggggacgacagcagcagccaggcccagcagtctccgtcccttgccaagagg
attatgttcacacccggcgggacgctgaagatcgacactcccaccatactcaatatgacc
acagccaacggccagcagctcagcatcccactgcaaggtataaagaatgatctgggaggc
atcacgctgatccaggtacagaccagaggggagcccggcagtcccattacagcccaggtc
ctcttgacagcctcccccagccggcccatcccggcaccccaggcccagccagacccccaa
cagagccggccccgacgcaccggctccttggccctcttcttcaggaaggtgtaccacctg
gccagtgtgcggctgagagatctgtgcgttaggctggacatctcggcagagctgcggggc
aagatctggacttgctttgagcactccatcgtccagtgtccggagctgatgaaagacaga
cacctggaccagctcctcctttgcgccatctacataatctctaagattacgaaagaaggc
cacacattccaggacatcatgaaatgttaccgcagtcaaccacaagccagcagtcatgtc
taccgcagtgtcctcatccgacccagcagcaccagagaacagccctcagacgagaacatg
gaagtggacccctctggtggaacatctttaatttcagctgctgagaaagccgaccagagc
agcagagaggaggctcttgcccaaggcgaggagcgcggcgacctcatccagttctacaac
tctgtctatgtgctgaagattaagggctttgccctccgatacgccgcccccagcatggac
aacaggatggaggcccctcctctgtccccgttcccctcgatgagagcccagcccctgtcc
ccccgtcgcatctcccagagacactcgatctacgtgtccccacacaagaacggctcctgt
ctcaccccgaactctgcctacacctacaagatcaacggcagcccctccaaagaactgact
gacatcaaccggatgatccgccagggcggggtgagcaggaaaagggccttttccatggag
ggcgactacttgggcgagtcccccaccaaacgggtgtgtcccgagagtgaggatgtgctg
ctcaaacggctgcaggacgtggtcagcgagagagcccaccactga
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integrated database retrieval system
