Oncorhynchus gorbuscha (pink salmon): 124003453
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Entry
124003453 CDS
T07892
Name
(RefSeq) liprin-beta-2-like isoform X1
KO
K27096
liprin-beta
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124003453
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124003453
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
DUF745
FxsA
AAA_13
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
124003453
NCBI-ProteinID:
XP_046167681
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All DBs
Position
LG02:complement(47705604..47836885)
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AA seq
1085 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKAAAEYTNGLFELGSPGSVGPLQVLQLVEDLRLALEL
QPREEERDTLRAQVPSSTAHMLMDWLEMDRYSERVSVNLCSPVNNESYQERLVRLEGDKE
SLVLQVSVLTDQVEAQGEKIRDLESSLEEHYHKLNSTEEMLKQELLSRTSLETQKLDLMD
EVSYLKLKLVDMDEEQNHNDSSEDQQNKAECVVNLISELQEQMCRFQEEIHTRIMEKRAM
EGQGESGARKAYNQCPDVGLGGSDVEEFCCRCGGQNYVLCYSQGFLQELRFLKSKVDELE
GEKSQYEKKLKATKLSISYSLHVCYQSLLSKLSSLKLTVEHTQVEKQHWEERWRTAQAEI
ADLQQMLASKDSAIEGLQSQLVSRGPMTNENPERVEEVYRRQLTDKYQELQRLKMGMESL
VATNYEKDRHIEELTVLLGQYRKMKEVMALTQGSSEKLLVGSSEEELSGSLKMRALTHKA
HSDIIRSAMSSRGSSPLLVSPSSFQKELDSSCRSIQTSLETSMVMVSQSDAGCFYSGEWS
QQRMLSSSLEELQSGSSPKHVVVGQPVEPVSENQHIEMNKYQTLPGTLSRPDVNGDREQC
STPGQLSPDDSEDSEFHLRKSERLDESTLSDLSPLSSGVDSGQQSPVSPENKKNHRGIKK
LWGKIRKTQSGSLQGEDLEPGEFKRGGLRATAGPRLARAGETLTSVRDLKTPFSKWTPEQ
VCCWLEEYGLGQYVILARHWADSGQTLLSASPQDLEKEMGIKNQLHRKKLQLALKSFSTK
QTEKSSELDHIWVTRWLDDIGLPQYKDQFHQGRVDGRMLQYLTVNNLLFLKVTSQLHHLS
VKCAIHVLHVNKFNPNCLKRRPGDENKTSPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGS
GVHGGLIILEPRFNSDTLAMLLNIPPQKTLLRRHLATNFNVLVGSQAQQEKREFMESSGY
TPLSTTAKVRPKKLGFSNFGHLRKKRCDDSTDYICPLEAAQAQAQLQAVVNGAHRPYSGF
RGLSPILDRDPDRREQMVVTEGTVLQIEALSEGINQLTGFREERGAGAVPNIKGRPILVI
RETTL
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgcaagtcacatgttggaggcggccttggagcaaatggatgacatcatt
gcaggctccaaggctgcagccgagtacaccaacggcctgtttgagctgggctccccgggc
agcgtgggacccctgcaggtgctgcagctggttgaggacctgaggctggccctggagctg
cagcccagagaggaggagagggacaccctgagggcccaggtccccagcagcaccgctcac
atgctcatggactggcttgagatggacaggtactcagaaagggtctcggttaacctctgc
tccccggtgaacaatgagagctatcaggagcggctggttcgcttagagggggacaaagag
tctctggtgctccaggtgagcgtgctcacagaccaagtggaggcccagggagaaaagatc
cgagacctggagagctctctggaggagcactaccacaagctcaactccactgaggaaatg
ctaaagcaggagctgctgagccggacctcattggagacccagaaactggatctgatggat
gaggtttcctacctgaaactgaagctggtcgacatggacgaggaacagaaccacaacgac
agcagcgaggaccagcagaacaaagctgagtgtgtggtaaatctgattagcgagctccag
gagcagatgtgtaggtttcaggaggagatccatacccggatcatggagaaacgggccatg
gagggccagggggagagtggtgcccgcaaggcctacaaccaatgccccgacgtgggcttg
ggtggctctgacgtggaggagttttgctgtcgctgtggaggacagaattatgttctgtgt
tattcacagggcttcctgcaagaactccggtttctcaagagtaaagtggatgagctggag
ggggagaaatcgcagtatgagaaaaaactaaaggccacaaagctgtctatctcttactct
ctccatgtgtgttaccagtcgctcttgtccaagctctctagcctgaagctcactgtagag
cacactcaggtagagaagcagcactgggaggagcgatggcggaccgctcaggcggagata
gcagacctacagcagatgctggcttccaaagactctgcgattgagggcctacagagccag
ctggtctccagaggcccaatgaccaatgagaacccagagagagtagaggaggtgtatagg
agacagctgacagacaaataccaagaattgcaaaggttgaaaatggggatggagtcttta
gtagcaactaattatgagaaagaccgtcacatagaggagctgactgttctcctgggccag
tacaggaagatgaaggaggtgatggccctcactcaagggtccagtgagaagctcctggtt
gggagcagtgaggaggagctgagtgggagtctgaagatgagggctctcacccataaagct
cattcagacatcatccggtcagcgatgtcttctagaggctcctctcccctgttagtgtct
ccctcgtcctttcagaaagagctggactccagctgccgcagtatccagacctccctggag
acgtcgatggtgatggtctcccagagtgatgctggttgcttctacagcggagaatggtcc
caacaacggatgctttcaagtagcctggaggagttacaaagtggatcgtcaccaaagcat
gtcgtggtgggtcaaccagttgaaccggtgtcagagaatcagcacattgaaatgaacaaa
tatcagaccctaccagggacgctgtcccgacctgacgtgaatggggatcgagagcagtgt
tctacgccaggccagctgtcccctgacgatagcgaggacagtgagtttcacctaagaaag
tcggagagactggatgagtccacactgtcagacttgtctcccctgtcgtctggagtagac
tcaggacagcagtcccctgtctctccagagaacaagaagaaccaccggggcatcaagaag
ctctggggaaagataaggaagacacagtctggcagcctgcagggagaggaccttgagcct
ggagagtttaagagggggggactgagagccaccgccggccctcgcctggcccgggccgga
gagacattgacctctgtgcgggatctgaagacgcccttctccaagtggactccggagcag
gtgtgttgctggctggaagagtatgggctgggccagtatgtgattctggcccgacactgg
gccgacagcgggcaaactctcctctctgcctcaccacaggatttagagaaggagatgggg
attaagaatcaactgcacagaaagaagctgcagttggccttgaagtcgttcagcaccaaa
cagacagagaaatcctctgaactggaccacatctgggtcacacgttggcttgatgacatt
ggtttacctcagtacaaggatcagtttcaccagggaagggtagacggcagaatgcttcag
tacttgacagtgaacaatctcttgttcctgaaagtgaccagtcagctccatcacctcagt
gtgaagtgtgctatccacgtcctccacgtcaacaagttcaaccccaactgtctgaagaga
aggcctggagatgagaacaagacgtctccctcggaggtggttcagtggtctaaccacagg
gtgatggagtggcttcgctcggtggacttggcggagtacgctcccaacctgaggggcagc
ggggtgcacgggggccttatcattctggagcctcgttttaactcagacaccctggccatg
ctgctcaacatcccccctcagaagaccctgctgcgacgccacctggccaccaacttcaac
gtgctggtgggctcccaggctcagcaggagaagagggagttcatggagtcgtctggctac
actcccctcagcaccacagccaaagtcaggccaaagaagttgggcttctcaaacttcggc
cacctgaggaagaagagatgtgacgactcgactgactacatctgccccctggaggcggcc
caggcccaggctcagctccaggcggtggtgaacggggcccaccggccctactccggcttt
aggggcctcagcccaatcctggacagagacccagacagacgagagcagatggtggtgaca
gaggggaccgtactgcagatagaagctctttctgagggaataaaccaactcacaggtttc
agagaggagagaggggctggagctgttccaaacatcaaaggcagacccatactggtcata
agggaaaccaccctctga
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