Oncorhynchus gorbuscha (pink salmon): 124003510
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Entry
124003510 CDS
T07892
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124003510 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124003510 (taf4a)
03036 Chromosome and associated proteins [BR:
ogo03036
]
124003510 (taf4a)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124003510 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
124003510 (taf4a)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
124003510 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF7438
Motif
Other DBs
NCBI-GeneID:
124003510
NCBI-ProteinID:
XP_046167762
LinkDB
All DBs
Position
LG18:59437823..59449182
Genome browser
AA seq
939 aa
AA seq
DB search
MLMSSRTNGDLLKRLQKQVCCGNVVLLVVSSVNESKHSLICSPPSLTRVSAPQQGLECKG
GVIISNTWSQGSAMDASSSESDSSARHGQGKTVAVSASIITPLPNHGGKVASSATQTLNG
GSLMNCHNSGSAVSLTGTPLSSSCTSSGNASVDVTVVNNGPGLSKGHASAVMPPSLNTTI
IQTSFVNSPNVVTSSHAASLGTGPAISHIVRPSMQTEGSGTAMNGPNAGLPFDCLNNGQS
PSSVAISAGSHIIMAEAPKTSIQTASCAVTNPSFQSAPRASTPVTVAASPGGSRSIAQQV
LAPRHPQTSPNQPNVQNIQLPPGMVLVRSESGQLLMIHQQTLAQMQSQSQSQGVMAPRPA
TPTSTPPFQITSVQAPGTPILTRQVTPTTIIKQGSPVPTSAPVNTTLQKPPVTTTLQRPP
VLQSPMIVVGAAAGTSMGTALPGATQRTVTASPGTTVTLATETMENVKKCKNFLSTLIKL
ASSGKQSSETAANVKDLVKDLLEGKIEVEDFTNRLYRELNSSPQPYLVPFLKRSLPALRQ
LTPDSAAFIQHSGLQQQASATNPTTVVLDSPALRPAAPTIRPHLQSVISKQGLTTPMVLQ
PRQQGAMVRPLQMTPMVTLRGPPPHSHIMLGQPQVQLKQLQTIPVVNPGVLTGSKSSPGA
ASLATVVQKNKLKEAGGTFRSAMDDDDINDVASMAGVNLSEESARILATNSELVGAVTRS
CKDEAFLHTSTLTSRILEIGKKFGVSDLGPEVVNYVSHASQTRLQNLLEKVSEVAQQRNI
NFKEDSRYEQTSDMRAQIKFFEQLDQMEKQRKEEQEREILMKAAKSRSRQEDPEQLRLKQ
KAKEMQQQELFQLRQKEANLTALAAIGPRKKRKMEAAAAAAGAEGSGSSPAASGSGSSGA
SRQFIRQRITRVNLRDLLFCLENERDTSHSHLLYKGFLK
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgctaatgtccagcagaacaaacggggacttgctcaagaggttgcaaaagcaggtatgc
tgtggtaacgttgttttgcttgttgtttcaagtgtaaacgaaagcaaacactcgcttatt
tgttcacccccttctctcacccgtgtttccgctccacaacaggggctggagtgcaaaggg
ggtgtcattattagtaatacgtggtcccagggttcagctatggatgcctcatcgagtgag
tcggactcatcggcacgacacggccaaggaaagactgttgctgtcagtgccagtataata
actcctctcccaaaccacggggggaaagtagcctcttccgcaactcaaactttgaatgga
ggcagtttaatgaactgtcacaattcaggaagcgctgtctctctcactgggacaccgctg
tcaagtagttgcacgagtagcggcaatgcctcggtagatgtcacagttgtcaacaacggg
ccggggttgtcaaaaggacatgcgagcgcagtaatgccaccttcattgaacaccactatc
atccagacatcattcgtgaactctccgaatgttgtcacctcgtctcacgctgcgagtctg
ggcactggacctgccatatcacatattgtgaggccatctatgcaaactgagggatctggt
acagcgatgaatggtcctaatgcgggattgcctttcgattgcctgaacaatggtcagtcg
ccctcgtctgtggctatcagtgcggggtcgcacataatcatggcagaggcgcccaaaaca
agcatacagactgcttcatgtgctgtaacgaacccgtcgttccagagcgcaccgagggct
tccactccggtgacagtggctgcgagcccgggagggagccgttctatcgcgcaacaggtg
ttggcgcctcggcacccccagacatccccgaaccagcccaacgttcagaacatccagctt
cccccaggtatggtcctggtgcgcagtgagagtgggcagctgttgatgatccaccagcag
accctggctcaaatgcagtcccagtcccaatcccagggagtcatggccccccgcccagcc
acccccaccagcactcctcctttccagatcacctcagtccaggctcctggaacgcccatc
ctcactaggcaggtgactcccaccactatcatcaagcagggctcacctgtgccaacctct
gctcctgtcaacaccacactccagaagcctcctgtcaccaccacactccagaggcctcct
gtcctacagagtcccatgattgtggtaggggctgctgcaggcacttctatggggacagcg
ctaccaggggccacccagaggaccgtcaccgcatcacccgggaccactgtcaccttggca
acggagacgatggagaatgtgaagaaatgcaagaacttcctgtctacattaatcaagctg
gcgtccagcgggaagcagtcctcagagactgccgccaacgttaaagacctggtcaaagat
ctcctggaagggaagattgaagtcgaggacttcaccaacaggttatacagagagctcaac
tcctcacctcagccttacctcgtgcctttcctcaagaggagccttcctgctctgcggcag
ctcaccccagactcagcagccttcatccagcacagtgggctccagcagcaggcctctgcc
accaaccccaccactgtggtactggacagcccagccctgcgccctgcagccccaaccatc
agaccacacctccagtctgtcatcagcaaacagggactgactaccccaatggtgctccag
cctcggcagcagggggcaatggtaaggcctcttcagatgacccccatggtgaccctcaga
ggaccgcccccccacagtcacatcatgctgggacagccacaggtgcagctcaaacagcta
cagacaatccctgtagtgaatcctggagtgttgactggatctaagtcgtctcctggtgct
gcctctctggccactgtagttcagaagaacaagctgaaggaagctgggggcacattcagg
tcagctatggatgacgatgacatcaatgatgtggcatctatggctggggttaacctgtct
gaggagagtgcccgtatcctggcaaccaactccgagctggtgggagcggtgacacggtcc
tgtaaggacgaggccttcctccatacctccacactgaccagtagaatactggaaataggt
aagaagtttggtgttagtgatctggggccggaggtagtgaactacgtgtcccacgcttcc
cagaccaggcttcagaacctgttggagaaagtctctgaggtggcccagcagaggaacatc
aacttcaaggaggacagtcggtacgagcagacgagcgacatgcgtgcccagatcaagttc
tttgagcagctggatcagatggagaaacagaggaaagaggagcaggagagagagattctg
atgaaggcagcaaagtctcgttctcgtcaagaagaccctgagcagctgcggttgaaacag
aaggccaaagagatgcagcagcaggagctgtttcagttgagacagaaggaagctaacctg
acggcgctggcagccataggccccaggaagaagaggaaaatggaggctgcagccgctgca
gctggagctgagggctcagggtccagtcccgctgcgtctggtagtggtagttcaggagca
tccagacagtttatccgccagcgcatcactcgtgtcaacctcagggacctgctcttctgt
ttggagaatgagagagacaccagtcactcccatctcctctacaaaggcttcctcaaatag
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