KEGG   Oncorhynchus gorbuscha (pink salmon): 124003514
Entry
124003514         CDS       T07892                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124003514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    124003514
   03041 Spliceosome [BR:ogo03041]
    124003514
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     124003514
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124003514
Spliceosome [BR:ogo03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    124003514
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 124003514
NCBI-ProteinID: XP_046167770
LinkDB
Position
LG18:complement(43425042..43432145)
AA seq 373 aa
MSKESPREPEQLRKLFIGGLSFETTDESLRTHFERWGSLTDCVVMKDPVTKRSRGFGFVT
YSSVDEVDASMEARPHKVDGRQVEPKRAVSREDSSRPGAHTTVKKIFVGGIKEDTEEHHL
RDYFDQFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTLNGHNCEVRKAL
SKEDMNRSGPRGGNFGRGGGYGGGFGGGRGGGGGYGDNDGYNNYGGNGGGYGGGPGGYGG
GNRGYGGGGGGGYGNQGGSYGGGGYDNYNNGGGGGGGGSYRGGNYGASSGGGSSSGSGGG
GGGDYNDFGNYNSQSSSSYGPMKGGSGYSGGSGGGRSSNPYGGGGGGGGVGGGGGYGGGS
GGGYGGGSGGRRF
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgtcgaaggagtctccccgtgagccggagcagctccgcaagctcttcattggtgggctg
agcttcgagactaccgacgagagtttgcggacccattttgaaagatggggatccctcaca
gattgtgtggtaatgaaagatccagtcacaaagagatcgaggggctttggctttgtcact
tacagctctgtggatgaagttgatgcatcaatggaggctcgtcctcataaggttgatggc
cgccaagtggagcccaagagagcggtgtccagagaggattcctcaaggccaggtgctcac
accactgtgaagaagatctttgtgggtggcatcaaggaggacacagaggagcatcacctt
agggactactttgatcaatttggcaagatcgaagtcatcgacatcatgactgataggacc
agcgggaagaagagggggtttgcctttgttacatttgatgatcatgatgcagtcgatagg
attgtcatccagaagtatcatacattgaatggtcacaactgtgaagtgaggaaggctttg
tcaaaggaagacatgaaccggtccgggccaagaggtggaaactttggtagaggtggtgga
tatggaggtggtttcggtggagggagagggggaggtggaggatatggtgataacgatgga
tacaataactatggaggcaatggtggcggctatggtggaggtcccggcgggtatggtggt
ggcaaccggggctatggcggaggcggcggcggtggttatggtaaccagggtggcagctat
ggaggaggaggatacgacaactacaacaatggtggtggtggtggtggaggtggaagctac
agaggtggtaactacggagctagtagtggtggtgggagcagcagtggaagtggtggtggt
ggtggtggagactacaatgactttggcaattacaacagccagtcgtcttccagctacggc
ccaatgaaaggaggcagcggctatagtggcggcagtggagggggccggagcagcaaccca
tatggtggtggtggtggtggtggtggtgttggtggtggtggtggttacggaggaggctcc
ggtggtggatatggagggggctccggaggtcgaaggttctag

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