Oncorhynchus gorbuscha (pink salmon): 124003530
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Entry
124003530 CDS
T07892
Name
(RefSeq) contactin-3-like isoform X1
KO
K06761
contactin 3/4/5/6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124003530
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ogo00537
]
124003530
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
Contactins
124003530
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ogo00537
]
Others
124003530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
Pur_ac_phosph_N
C2-set_3
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
124003530
NCBI-ProteinID:
XP_046167811
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All DBs
Position
LG18:complement(63187543..63263943)
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AA seq
1031 aa
AA seq
DB search
MMLLWKRLLLLSIIGCLAAHAQDVLFQGPRWRTEPSDLILPNNSPDQEATIACEAEGKPS
PQYRWSLNGTLIDLGSDYRRHMSGGNLIINSLDRDQDTGIYQCTAFNTWGIILSCRATLQ
FAYLDNFKTQTARSAVNVRESQGVVLLCGPPMHSGELTFAWIFNEYPYFVQQDSRRFISQ
ETGSLYIAKVEPSDVGNYTCVVNNSITKGKVLSFPTPLVLRNDGAMGEYEPKIEVNFPDT
VPAAKGSTVKLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPHFQQEDTGMYE
CVAENSRGKNAARGRIAFQAKPHWLQTMIDGALSIEENLFWECKANGKPKPSYSWLRNGD
NLMAEGRVQIENGALSIAALNLSDAGMYQCVAENKHGIIYSSAELMVLASPPSFSKNPLK
PLLKARSGSEVVLECKPQASPRAISLWKKSNEIVQKNERITLLANGTLKIVNATRRDAGS
YTCIAKNQFGTASATGRLLITEPTRITQRPANMEIIVGESIVLPCQIASDPALDVSFSWE
FNGQLIDFHGDADHFDRVGGSISGDLMIRNIQLNHGGKYVCVIDTDVESLSASAILVVKG
PPGPPDTVAVEEITDSTAQLSWSPGRDNGSPITGYIIQARTPFTVGWQAVDTVPEVINGN
TLTATVVGLNAWVEYEFRVVARNSVGMGEPSPASAKTRTEDTMPDTAPTDVGGGGGTKSE
LVITWEPVPEELQNGEGFGYIIAFRPLGAITWTRVVISTPGVARYIFRNDTIPPFSPFDV
KVGAYNNRGEGPFSSIATVFSAEEVPSEAPKRVWGRSVSAATVEVIWEALPVNPERVLGY
EVVYWEDDTKPDTVGKVRTSGNYSAVNVTGLSANTQYYLAVCAFNTAGTGPQSTHINATT
KKPAPGQPPLNVEWTMIGSLLTLHWGPVIAMETEAEVIGYLVLLRRHRYNDVNSIITNKT
RMELTLSPNDNYLIQIKALSEGGEGVGSEPIHIHKLSMGARGSGASSLNPLSMSHLSAFL
ISALLLLKSSW
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgatgttactatggaaacgacttctgctgctatcaatcattggttgccttgccgctcat
gcacaagatgtcctgttccaagggccaagatggagaacagagcccagtgacctcattctc
cccaacaactcccctgaccaggaagctaccattgcatgtgaggcagaggggaaaccctcc
ccacaatacagatggtcgcttaacggaacactcattgatctggggagtgactaccggcgt
cacatgtctggaggcaacctgatcattaacagtctggacagggaccaagacacagggata
taccagtgcactgccttcaacacatgggggatcatcctcagctgccgagccactctacag
tttgcatacctagataacttcaagacccaaactgcacggagtgctgtgaatgtccgagag
agccaaggagtggttttgctatgtggaccacccatgcattctggagagctgacgtttgca
tggatcttcaatgagtacccctactttgtccagcaagatagtcgtcgattcatctcccag
gagacaggaagtctgtacatcgctaaagtggagccttctgatgtgggcaactacacctgt
gtggtcaacaatagcatcactaagggcaaagtcctcagctttcctacaccactggtcctg
aggaatgacggagcaatgggtgaatacgaaccgaaaatagaagttaatttccctgacact
gttccagctgcgaagggatccacggtaaaactagaatgcttcgcactgggaaacccagtc
ccagaaataagttggaggagaaccagcggtgtcccatttcccagtaaggtgaagatgaag
aactccaacgctgttcttgaaattccacatttccagcaggaagacacagggatgtatgag
tgcgtggcagaaaatagccggggaaaaaacgctgcacgaggtcgtatcgccttccaggca
aaaccccattggctgcaaacaatgatcgacggggccctgtccattgaggagaacctgttc
tgggagtgtaaggcaaacggaaaacccaagccctcctacagttggctgaggaatggagac
aacctaatggcagagggccgggtgcaaatcgaaaacggggctctctccatagcagcatta
aacctgtcagacgccggaatgtatcagtgtgtggctgaaaacaaacatggcattatttat
tccagcgctgagctaatggtgttagcatcacctcccagtttctccaagaatccactgaag
cccctgctgaaagctcgctcaggcagtgaagtggttctggagtgcaagccccaagcctcg
ccccgggcaattagcctgtggaagaaaagcaatgagatcgtgcagaaaaacgagaggatt
actctgcttgccaacgggacactgaagattgtcaacgcaaccagaagggatgcggggagc
tacacatgcattgctaaaaatcagtttgggactgcaagcgccaccggaagactccttatc
acagagcccaccagaatcacccagaggcctgctaacatggagatcattgttggcgagagt
atcgtgctgccctgccagatagccagcgatccagccttggatgtgtctttctcctgggaa
ttcaacgggcagctcatagacttccacggggatgccgaccatttcgacagagtaggaggg
agcatttcaggagatctgatgattcgtaacatccagctgaatcacggggggaaatatgtc
tgtgttatcgacaccgacgtagagagcttgtccgcttcggccatcttggttgtgaaaggt
ccccccgggcccccggacacagtagcagtggaggagatcacagatagcacggcccagctc
tcttggagccccggcagggacaacggcagtcctatcaccggctacatcatccaggcccgg
acccccttcactgtgggctggcaggctgtggacacagttcctgaggtgatcaatggcaac
acactgacagccactgtggtgggcctgaacgcctgggtggagtatgagttcagggtggtg
gcccgcaacagtgtgggcatgggagagcccagtccagcctcagccaagaccaggacagag
gataccatgcctgatacagctcccactgatgttggaggcggaggaggcacaaaatctgaa
ttagtgataacttgggagcccgtgcctgaggaactgcagaatggagagggcttcggttac
atcatcgccttccggccgctgggtgccatcacctggacacgagtggtcatctccacgccc
ggggtggcccgatacatcttccgcaacgacaccatcccgcctttctcgccgttcgatgtg
aaggttggggcgtacaacaaccgtggggaaggccccttcagttccatagccacagtgttc
tcagcagaggaagtccccagtgaggctcctaagagggtttggggcaggagtgtatctgca
gctacagttgaagtgatttgggaagccctccccgttaaccctgaaagagtgctgggttat
gaggtggtgtactgggaagatgacaccaagcctgacacagtaggcaaagtcagaacctct
ggaaactactcggcggttaatgtgactggactgagcgctaacacacagtattatctagct
gtgtgcgcctttaacactgcagggacagggccacagtctacacacatcaacgccaccacc
aagaagccagcaccaggccagcctcctttgaatgtagagtggaccatgattggctctctg
ctcactctacactggggtcctgtgatagccatggagacagaggcagaggtcatcggatat
cttgtgctgttgagaagacaccggtacaatgacgtaaacagcatcataacaaacaaaacc
aggatggagctgacgctgtctcccaacgacaactacctgatccagatcaaggccctgagt
gagggtggtgaaggtgtgggcagcgaacccatccacatccataaattaagcatgggcgca
cgaggttcgggagcatctagtctcaatccgctatcaatgtctcatctctccgcattcctc
atcagcgctctcctcctcctcaagtcctcctggtga
DBGET
integrated database retrieval system