KEGG   Oncorhynchus gorbuscha (pink salmon): 124003530
Entry
124003530         CDS       T07892                                 
Name
(RefSeq) contactin-3-like isoform X1
  KO
K06761  contactin 3/4/5/6
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ogo04515]
    124003530
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ogo00537]
    124003530
Cell adhesion molecules [BR:ogo04515]
 Immunoglobulin superfamily
  Contactins
   124003530
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ogo00537]
 Others
  124003530
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_DSCAM-DSCAML_C Ig_5 Ig_C17orf99 Pur_ac_phosph_N C2-set_3 Pox_C7_F8A
Other DBs
NCBI-GeneID: 124003530
NCBI-ProteinID: XP_046167811
LinkDB
Position
LG18:complement(63187543..63263943)
AA seq 1031 aa
MMLLWKRLLLLSIIGCLAAHAQDVLFQGPRWRTEPSDLILPNNSPDQEATIACEAEGKPS
PQYRWSLNGTLIDLGSDYRRHMSGGNLIINSLDRDQDTGIYQCTAFNTWGIILSCRATLQ
FAYLDNFKTQTARSAVNVRESQGVVLLCGPPMHSGELTFAWIFNEYPYFVQQDSRRFISQ
ETGSLYIAKVEPSDVGNYTCVVNNSITKGKVLSFPTPLVLRNDGAMGEYEPKIEVNFPDT
VPAAKGSTVKLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPHFQQEDTGMYE
CVAENSRGKNAARGRIAFQAKPHWLQTMIDGALSIEENLFWECKANGKPKPSYSWLRNGD
NLMAEGRVQIENGALSIAALNLSDAGMYQCVAENKHGIIYSSAELMVLASPPSFSKNPLK
PLLKARSGSEVVLECKPQASPRAISLWKKSNEIVQKNERITLLANGTLKIVNATRRDAGS
YTCIAKNQFGTASATGRLLITEPTRITQRPANMEIIVGESIVLPCQIASDPALDVSFSWE
FNGQLIDFHGDADHFDRVGGSISGDLMIRNIQLNHGGKYVCVIDTDVESLSASAILVVKG
PPGPPDTVAVEEITDSTAQLSWSPGRDNGSPITGYIIQARTPFTVGWQAVDTVPEVINGN
TLTATVVGLNAWVEYEFRVVARNSVGMGEPSPASAKTRTEDTMPDTAPTDVGGGGGTKSE
LVITWEPVPEELQNGEGFGYIIAFRPLGAITWTRVVISTPGVARYIFRNDTIPPFSPFDV
KVGAYNNRGEGPFSSIATVFSAEEVPSEAPKRVWGRSVSAATVEVIWEALPVNPERVLGY
EVVYWEDDTKPDTVGKVRTSGNYSAVNVTGLSANTQYYLAVCAFNTAGTGPQSTHINATT
KKPAPGQPPLNVEWTMIGSLLTLHWGPVIAMETEAEVIGYLVLLRRHRYNDVNSIITNKT
RMELTLSPNDNYLIQIKALSEGGEGVGSEPIHIHKLSMGARGSGASSLNPLSMSHLSAFL
ISALLLLKSSW
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgatgttactatggaaacgacttctgctgctatcaatcattggttgccttgccgctcat
gcacaagatgtcctgttccaagggccaagatggagaacagagcccagtgacctcattctc
cccaacaactcccctgaccaggaagctaccattgcatgtgaggcagaggggaaaccctcc
ccacaatacagatggtcgcttaacggaacactcattgatctggggagtgactaccggcgt
cacatgtctggaggcaacctgatcattaacagtctggacagggaccaagacacagggata
taccagtgcactgccttcaacacatgggggatcatcctcagctgccgagccactctacag
tttgcatacctagataacttcaagacccaaactgcacggagtgctgtgaatgtccgagag
agccaaggagtggttttgctatgtggaccacccatgcattctggagagctgacgtttgca
tggatcttcaatgagtacccctactttgtccagcaagatagtcgtcgattcatctcccag
gagacaggaagtctgtacatcgctaaagtggagccttctgatgtgggcaactacacctgt
gtggtcaacaatagcatcactaagggcaaagtcctcagctttcctacaccactggtcctg
aggaatgacggagcaatgggtgaatacgaaccgaaaatagaagttaatttccctgacact
gttccagctgcgaagggatccacggtaaaactagaatgcttcgcactgggaaacccagtc
ccagaaataagttggaggagaaccagcggtgtcccatttcccagtaaggtgaagatgaag
aactccaacgctgttcttgaaattccacatttccagcaggaagacacagggatgtatgag
tgcgtggcagaaaatagccggggaaaaaacgctgcacgaggtcgtatcgccttccaggca
aaaccccattggctgcaaacaatgatcgacggggccctgtccattgaggagaacctgttc
tgggagtgtaaggcaaacggaaaacccaagccctcctacagttggctgaggaatggagac
aacctaatggcagagggccgggtgcaaatcgaaaacggggctctctccatagcagcatta
aacctgtcagacgccggaatgtatcagtgtgtggctgaaaacaaacatggcattatttat
tccagcgctgagctaatggtgttagcatcacctcccagtttctccaagaatccactgaag
cccctgctgaaagctcgctcaggcagtgaagtggttctggagtgcaagccccaagcctcg
ccccgggcaattagcctgtggaagaaaagcaatgagatcgtgcagaaaaacgagaggatt
actctgcttgccaacgggacactgaagattgtcaacgcaaccagaagggatgcggggagc
tacacatgcattgctaaaaatcagtttgggactgcaagcgccaccggaagactccttatc
acagagcccaccagaatcacccagaggcctgctaacatggagatcattgttggcgagagt
atcgtgctgccctgccagatagccagcgatccagccttggatgtgtctttctcctgggaa
ttcaacgggcagctcatagacttccacggggatgccgaccatttcgacagagtaggaggg
agcatttcaggagatctgatgattcgtaacatccagctgaatcacggggggaaatatgtc
tgtgttatcgacaccgacgtagagagcttgtccgcttcggccatcttggttgtgaaaggt
ccccccgggcccccggacacagtagcagtggaggagatcacagatagcacggcccagctc
tcttggagccccggcagggacaacggcagtcctatcaccggctacatcatccaggcccgg
acccccttcactgtgggctggcaggctgtggacacagttcctgaggtgatcaatggcaac
acactgacagccactgtggtgggcctgaacgcctgggtggagtatgagttcagggtggtg
gcccgcaacagtgtgggcatgggagagcccagtccagcctcagccaagaccaggacagag
gataccatgcctgatacagctcccactgatgttggaggcggaggaggcacaaaatctgaa
ttagtgataacttgggagcccgtgcctgaggaactgcagaatggagagggcttcggttac
atcatcgccttccggccgctgggtgccatcacctggacacgagtggtcatctccacgccc
ggggtggcccgatacatcttccgcaacgacaccatcccgcctttctcgccgttcgatgtg
aaggttggggcgtacaacaaccgtggggaaggccccttcagttccatagccacagtgttc
tcagcagaggaagtccccagtgaggctcctaagagggtttggggcaggagtgtatctgca
gctacagttgaagtgatttgggaagccctccccgttaaccctgaaagagtgctgggttat
gaggtggtgtactgggaagatgacaccaagcctgacacagtaggcaaagtcagaacctct
ggaaactactcggcggttaatgtgactggactgagcgctaacacacagtattatctagct
gtgtgcgcctttaacactgcagggacagggccacagtctacacacatcaacgccaccacc
aagaagccagcaccaggccagcctcctttgaatgtagagtggaccatgattggctctctg
ctcactctacactggggtcctgtgatagccatggagacagaggcagaggtcatcggatat
cttgtgctgttgagaagacaccggtacaatgacgtaaacagcatcataacaaacaaaacc
aggatggagctgacgctgtctcccaacgacaactacctgatccagatcaaggccctgagt
gagggtggtgaaggtgtgggcagcgaacccatccacatccataaattaagcatgggcgca
cgaggttcgggagcatctagtctcaatccgctatcaatgtctcatctctccgcattcctc
atcagcgctctcctcctcctcaagtcctcctggtga

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