Oncorhynchus gorbuscha (pink salmon): 124003563
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Entry
124003563 CDS
T07892
Name
(RefSeq) syndecan-4-like isoform X1
KO
K16338
syndecan 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04512
ECM-receptor interaction
ogo04514
Cell adhesion molecule (CAM) interaction
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124003563
04514 Cell adhesion molecule (CAM) interaction
124003563
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124003563
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ogo00535
]
124003563
Proteoglycans [BR:
ogo00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
124003563
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
DltX
DUF8063
Motif
Other DBs
NCBI-GeneID:
124003563
NCBI-ProteinID:
XP_046167875
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All DBs
Position
LG18:34348406..34359111
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AA seq
208 aa
AA seq
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MHKVCLVLFLFASVYSESQVWETETWMPMKTTQAIYHDELISSGDSTNGSDFGFPDEEHD
TIDNDNKADDNEDYDDFSGSGDRVPTITIKNDNTMKSKPSMNKIPDLRLKPTMNEIQLVQ
KNNEVSVWVSPKPEEHPSNVLMAQAGEESIFNKTEVLAALIAGGAVGLFFAVLLILLLVY
HMKKKDEGSYDLGKKPIYKKAPTTEVYA
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaagtgtgcctcgttttgtttttatttgcttccgtctactccgagtcgcaggta
tgggagactgagacatggatgcccatgaagacgacccaagctatttatcatgacgagctc
atctcgtctggagactccaccaacggctcagactttggcttccccgatgaggagcacgac
acaattgacaacgacaacaaggcggacgacaatgaggattatgacgacttctctggctct
ggcgacagagtaccaactattacaatcaaaaatgacaataccatgaaatcaaagccttct
atgaacaagattccagacctgaggctcaaacccacaatgaacgagattcaattggtccag
aagaacaatgaagtgtcagtatgggtttctcccaagcctgaggagcacccatcgaacgta
ctgatggcccaggcaggggaggagagcatcttcaacaagactgaggtcctagcagctctt
attgctggtggagcagtggggctgttctttgctgtcctcctcatcctcctgcttgtctac
cacatgaagaagaaggatgaaggcagctacgacctgggaaagaagcccatctacaagaag
gctcccaccacagaggtctacgcataa
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