Oncorhynchus gorbuscha (pink salmon): 124003602
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Entry
124003602 CDS
T07892
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124003602
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
L1 family
124003602
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_5
C2-set_2
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
124003602
NCBI-ProteinID:
XP_046167950
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Position
LG18:63351060..63444799
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AA seq
1175 aa
AA seq
DB search
MRMRSSRWSPGLALLVGVVASICAFHPTTAIDIPLEVVGHVNIEQLPTITEASPSSLIAF
PFDESFPMTCEAKGNPKPEFWWTKNGEEFDPYQDPRLIKEKNSGTFVIPNTGNLTEYQGT
YRCYASNKLGTAITEEVEFVVPHVPKFPKEKIDPIEVEEGQPVILECNPPKGIPPLQIYW
MTIGLQHIEQDDRVSMGLNGDLFFSNALEKDSHRDYCCFAAFPKIRTIVQKNAMSVIVKS
KNSNNDSSSGPGHANSIMERKPSLLMPSGVKSETQLVKGDELLLECIAEGFPTPMIEWLK
IDHMLPDRVTIENHGKLLSIDQVDEDDNGKYMCKATNIHGMAVHYFDVSVEEPPQWVSEP
ESQLRMIGSDVHINCSATGTPQPTIQWMVNGKPIEEVPASNRKEFDGKIVLHNANSTDSA
VYQCEASNRHGTLLANVNIMIMNLPPMILTEEGLEYSAVEGKVIVMHCKVFSSPPSAVTW
NKEDSPGSLEGPRFTVHQNGSLEIYNVEKEDMGQYTCYTKNTEGMSAITALLDVKDPTKI
FQAPQDLQVLIGTTAQLSCLAVYDNSFSGDFEIVWEKDDVEIALNHTENSGYFVEDGILQ
IVNVSHRDQGMYKCVASTPMDQDTASALLMVLDIPHAPENLVLSEHKGRSVKLKWIPGED
HNSSTTEFIIEYEESQWEPGTWRELQRVPGNHGSAVLKLYGHVNYRFRVSGVNTVGRGRP
SEPTERYKTPPAAPDKNPENIKIEGHLPHEMDINWEPLSPIEHNGPGLEYKVSYKRQHVE
EDWQEHVVKRHSFVVKDTPTFVPYEIRIQARNHHGWGPEPKVVTGYSGEDFPSAAPDDVA
VEVMNNSLVKVSWMRVHKDKLHGHLGGYRISWWRLRSLLDSKKTHGDKHTLTFPGDRNHA
MVPGLTPFSEYSLIIMTFNRRGNGPGSHAVNFKTPEGVPEKTPVFRVTDVQKHTVTLTWA
PPLEANGVLTGYLLEYQLINDTEEVGVLQTVDISNPDTTMWVLQNLEAISRYKFYLRPCT
RVGCGPRVSKESTTTPEARLASIHGGISTQGWFIGLMCVAALLTLMVLIACFVNRNKGGK
YSVKEKEDLHPDLESQGIHDDTFCEYSDNDEKPLKGSQHSLSGQIKAEDSGDSLVDYGDE
DIQFNEDGSFIGEYAGRKEKKVSMEVKGTTNQSTA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaggtcgtcgaggtggagcccaggattggctctcctggtcggtgtggtcgcc
agtatctgtgcctttcaccccaccactgccatagacataccactggaggttgtaggtcat
gtaaacattgagcagctgcccaccatcacagaggcgtcccccagctctctgatcgccttc
cccttcgatgagagcttccccatgacgtgtgaagccaaagggaaccccaagccagaattc
tggtggacgaaaaatggggaagagtttgacccttaccaggacccaaggctgatcaaggag
aaaaactcggggacgtttgtgatccccaacactgggaacctcacagagtaccagggaact
taccgctgttatgcctcgaataaactagggacagccataacagaggaggttgagtttgtt
gtgccccatgtaccgaagtttcctaaggagaagattgatcccattgaggtggaggagggt
cagcctgtcattctggagtgtaaccctcctaaaggaatccctcctttacagatctattgg
atgaccatcggccttcagcacatagagcaggatgacagggtgtccatgggtctgaacggc
gacctgttcttctctaatgctctggagaaggacagccacagagactactgctgcttcgct
gcctttcccaagatacgcaccatcgtacagaagaatgccatgtctgtcatagtcaagagc
aaaaattcaaacaatgactcaagtagcggtccaggtcatgccaattcaatcatggagaga
aaaccaagtcttctgatgccctctggtgtcaagtcggagacacagctggtgaaaggtgat
gagctactactggagtgcattgcagagggctttccaactcccatgattgagtggttgaag
atagaccacatgctgcctgacagagtaacaatagagaaccatgggaaactcctgagcatt
gaccaggttgatgaagatgacaatgggaagtacatgtgtaaggctacgaacatccatgga
atggccgtccactactttgacgtatcagtggaagagcctcctcagtgggtgtctgagcct
gagagccagcttaggatgattggctcagatgtgcacatcaattgctccgccacgggcact
cctcagcccaccatccaatggatggtgaatggaaagcctattgaggaggtcccagcatct
aacagaaaagagtttgatggaaaaattgtcttgcacaatgccaactcgactgacagtgcc
gtctaccaatgtgaggcctccaacagacatggaaccctgctagccaatgtcaatatcatg
atcatgaatctgcctcctatgatcctgacagaggaaggtctggagtattcagcggtggag
gggaaggttatagtgatgcactgcaaggtgttcagttctccaccatctgctgttacctgg
aacaaggaggactccccaggatctttggagggtccaaggtttacagttcaccagaatgga
tcattggagatatataatgtggaaaaagaggacatgggccaatacacatgttacaccaag
aatactgaagggatgtctgctatcactgccttactggatgttaaagatcccacaaagata
ttccaggccccgcaagacttgcaggtcctaataggaaccacagcccagctctcctgcctg
gcggtgtacgacaactcattcagtggcgactttgagattgtgtgggaaaaagacgatgtg
gagatagcactaaaccacacagagaattctggatatttcgtagaggatggtatactgcag
attgtcaacgtcagccacagagaccagggcatgtacaagtgtgtggccagtactccaatg
gatcaggacactgcctctgcactactcatggtgctggacatcccacatgcacctgagaac
ttggtgctatctgaacacaagggcagaagtgtgaagctcaaatggatccctggggaggac
cacaacagctcaaccactgagttcattattgagtatgaggagagccagtgggagccgggg
acctggagagagcttcagagagttcctggaaatcacggctcggcagtcctcaaactttac
ggacatgtcaactatcgcttccgagtgtctggagtcaacacagtgggcagagggcgcccc
agtgagcccacagagagatacaagacccctcccgcagcccctgacaagaaccctgaaaat
atcaaaattgaaggtcatttgccacatgaaatggatatcaactgggagccattgtccccc
attgaacacaatgggccaggccttgaatataaggtgagttataagagacagcatgtggag
gaggactggcaagagcatgtggtgaagagacactcgtttgtagtgaaggacactcccacg
tttgtgccatatgagatcaggatccaggcaaggaaccaccacggatggggacctgaaccc
aaagtggtgacgggctactctggagaagacttcccctctgcggctcctgatgatgtagcg
gtggaggtgatgaacaactcactggtcaaggtcagctggatgcgtgttcacaaggacaag
ctgcatggacatctgggaggctacaggataagctggtggcggctgcgtagtctgctggac
tcaaagaagactcacggggacaaacacactctgacattcccgggggaccggaaccatgcc
atggtaccagggctcacgcccttctctgagtacagcctcatcatcatgaccttcaacagg
cgaggcaatgggccaggtagccacgccgtcaacttcaaaaccccagagggagttccagag
aaaaccccagttttcagggtcacagatgttcagaagcacaccgtcactctcacctgggca
cctcctctggaagccaacggagtccttacaggatacctgctagagtatcagctgatcaac
gacacagaggaggtgggtgtcctgcagactgtggatatcagcaaccctgacaccaccatg
tgggtcctgcagaacctggaggctatcagcagatacaagttctacctgcgcccctgcacc
agggtgggctgtgggccccgggtcagcaaggagagcaccaccacacctgaagcacgtctg
gcaagcatccatggaggaatctctacccagggctggttcatcggactgatgtgtgtcgcg
gctctcctcacactcatggtgttaatcgcctgctttgtcaacagaaataaaggagggaaa
tattccgtaaaggagaaagaggatcttcatccagacctagagtcccagggtatccatgat
gacaccttctgtgaatacagtgacaatgatgagaagccactgaagggcagccagcactct
ctgagcggacagatcaaagcagaggacagtggggacagcctggtggactatggggatgag
gacatccagttcaacgaagatggctccttcatcggcgagtacgcaggtcgcaaagaaaag
aaggtgtccatggaagtcaaaggaaccacgaatcagagcacagcgtga
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