Oncorhynchus gorbuscha (pink salmon): 124003610
Help
Entry
124003610 CDS
T07892
Name
(RefSeq) alpha-1-syntrophin-like isoform X1
KO
K24063
alpha-syntrophin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124003610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
124003610
NCBI-ProteinID:
XP_046167968
LinkDB
All DBs
Position
LG18:complement(28477506..28550908)
Genome browser
AA seq
571 aa
AA seq
DB search
MAATMKAQKTGLLELRVTVDRWIRVLATLTEETLTVSPGEVAEDIVKPNPTPAGAINGDP
ANLSSSPVPETITNVKRTVRVTKQDVGGLGISIKGGKENKMPILISKIFKGLAADQTEAL
YVGDAILSVNSADLRDATHDEAVQALKKTGKEVILEVKYIKEMSAFFKNTSPGAPLPWDS
PPATSQKGAHAPAELKEARTISLKMCQVTRKQCPPDTENRYFEVISSSRKSSVFLRAKDP
VMAQSWYNAIQVGVLGLVPRIRDELRAMQADLEVKHMGWITEQATQGPERPLLALLTERD
LLLYPTLPDTKDSINSPVKSHPLITTRLVHSGPGKSSPLLDSELSFGLRMGTKQGVETHV
FRVNSAKELSTWTHMLVDGCHNAAELIQEVTTACSWNGKECNLGVHINEGFSLFTEEMGI
RKTVLLQQPFERLRMSSDDGVRMIFLDFGGPEAEIVVHLPCGRHGCCMDSREDMAVSFVM
PLYCQLLTVLLELHLSSLYHPASEYWHPLPVRPECATGPCAVGEQMLEECRTAVPIVNVQ
SVSLAEKRSQRGHHHGSGHPKPLIMLILCKL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacgatgaaggcacagaaaacgggactgttagaacttcgagttaccgtggac
cgttggatccgtgtattagccacacttacggaggagactttaaccgtgagccccggagag
gtcgccgaagacatagttaaacccaacccaactcctgccggtgccattaacggagaccca
gccaacctcagctcctctccggtcccagaaacaatcaccaacgttaagcgcacggtgcga
gttaccaagcaagatgtgggaggacttggaattagtattaaaggtggaaaagagaacaaa
atgcccattctcatctcgaagatcttcaaggggttggcggctgaccagacggaggccctg
tacgtgggtgacgccatcctgtcggtcaacagcgccgacctccgggacgccacacacgac
gaggccgtgcaggccctgaagaagacgggcaaagaagtcatcctagaggtgaaatacatc
aaggagatgtctgccttttttaagaacacctcccccggtgcacccttaccctgggactcc
ccccctgccacatcacagaaaggcgcacacgcccctgccgagctgaaggaggccaggacc
atatcgctgaaaatgtgccaggtgactaggaaacagtgccccccggacacagagaacagg
tactttgaggtgatctcgtccagcagaaagagctcagtgttcctgagggccaaggacccc
gtcatggcccagtcctggtacaacgccatccaggtaggggtcttgggcctggttccccgc
atcagggatgagttgagggccatgcaggcggacctggaggtcaaacacatgggctggatc
actgaacaggcgacccagggtccagagagaccgttgctggctctgctgactgagagagac
ctgctgctataccccaccctgcctgacactaaagacagcatcaacagcccagtcaagagc
cacccgctcatcacaaccagactggtccactcgggtccggggaagagctctcccctgctg
gattcggagctctcctttgggctgcggatgggcaccaagcagggtgtagagacccacgtg
ttccgggtgaactcggccaaggagctttcaacctggacccacatgctggtggacggctgc
cacaacgccgcagagctcatccaggaagtcaccacagcctgcagctggaacgggaaggag
tgcaacctgggagttcacatcaacgagggcttttccctgttcaccgaggagatgggcatc
aggaagacggtgctcctccagcagcccttcgagcgcctgcgcatgtcctccgacgacggc
gtgcgcatgatcttcctcgacttcggaggacccgaggcggagattgtggtccaccttccc
tgtggccgacatggttgctgtatggacagtagagaggacatggccgtctcgtttgtcatg
ccactttactgccagctgttgaccgttctccttgaactccacctctcctctctgtatcat
cctgcatccgaatactggcatccccttcctgttcgacctgaatgtgccacaggcccctgt
gctgttggagagcagatgctagaagagtgtcggactgctgtaccaattgtcaacgtacaa
agtgtgtcccttgctgagaagaggagccagcgtggtcatcatcacggatccggacacccc
aaacccctcataatgttaatcctgtgtaaactataa
DBGET
integrated database retrieval system
