Oncorhynchus gorbuscha (pink salmon): 124003628
Help
Entry
124003628 CDS
T07892
Name
(RefSeq) cadherin-4-like isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124003628
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124003628
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Major cadherins
124003628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Fibulin_C
DUF4064
Stevor
DUF6479
DUF5385
Motif
Other DBs
NCBI-GeneID:
124003628
NCBI-ProteinID:
XP_046168003
LinkDB
All DBs
Position
LG18:complement(59468527..59799187)
Genome browser
AA seq
929 aa
AA seq
DB search
MHFVSVVILTCTLLVETSWGTKAGQPPKPPCRPGFSESFYTVFVSRDLLRGQSILKDTSL
SSERVKFEDCQHSKAVGFESSDPNFSVRPDGSVYAEQEVANLSEPIQFMVTAHGGHDPHI
WETTVKLALVGHQPSVPVSQIGVEDMIARAWDSNPRVIKFPRKHQKSSSANGLRRQKRDW
VIPPINVPENSRGPFPQMLVRIRSDQDLEKGIRYSITGAGADQPPIDVYNIDPVHGKMFV
TRPLDREERASYHLRAHAVDMNGNKVESPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSK
PGTLVMQVTANDSDDDTTANGMVRYRILSQTPHMPIPNMFTINSETGDIFTMAAGLDREK
VSQYIIIVQATDMEGNLNFGLSNTATALISVTDINDNPPELTARTFSGEVPENSVNVVVA
NLTVIDRDQPHSPNWAAQYRIASGDPQGHFLIRTNPVNNDGMVTVVKPVDYEQNRAFMLT
VIVSNKAPLASGIQSSLQSSAGVTISVQDVNESPVFPTNPKSIRFEEGVPAGTTLTVFAA
QDPDLFIQQTVRYSKLSDPANWLRINRTNGQITTMAVLDRESMYVRNNIYEATFLAADNG
KSGSPPASGTGTLQIHLIDVNDNAPVMMPKEAQLCERANPRSKVNITASDADADPHVGPF
VFELPSYPPSIRRNWTISRISGDYAQLRLRIPYLDAEVYDVPIIVSDSGNPPLSNRSIIK
VKVCPCDDNGDCTTTGAVAAAGLGTGAIIAILICIIILLILVLVFVMWMKRREKERQAKP
LLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESVEHIISKPVGVRRVDERPIIAE
SQYPVRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSS
SGDQDYDYLNDWGPRFKKLADLYGGGEDD
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgcattttgtatcggttgttatactgacgtgcaccttacttgtggaaacatcttggggg
accaaggcaggccaacctcctaaacccccatgcagaccaggcttctctgagagcttctac
actgtgtttgtctccagggatctactgcgaggacagagcattctcaaagacaccagccta
tcgagtgaacgtgtaaagtttgaggactgccagcacagtaaagcagtgggcttcgagagc
agtgaccctaacttcagtgtgcgccctgacggctcggtgtatgcggagcaggaagtggcc
aacctatcagaaccgatccagttcatggtgaccgcccacggaggtcatgaccctcacatc
tgggagactacggtcaagctggccttggttggacatcaaccctctgtccctgtgagtcag
attggagtggaggatatgattgcaagggcctgggactctaatcccagggttatcaagttt
ccacggaaacatcaaaaaagctcctctgccaatggactgagacgacagaagcgggactgg
gtcatcccaccaatcaatgtgcctgaaaactccagaggacccttcccacaaatgcttgtc
agaatccgctcggaccaagacctggagaaagggatacgctacagcatcactggagcaggg
gcggaccagcctcccattgacgtgtacaacattgaccctgtgcacggcaagatgtttgtc
accagacccctggacagagaggagagggcctcctaccatctgcgggcccatgctgtggac
atgaatgggaacaaggtggaaagccccatagacctatacatctacgtcatcgacatgaat
gacaaccggccagagttccagaaccaggtctacaatggctctgtggctgaaggctcaaag
ccaggcacgttggtgatgcaagtgacagccaacgactcagatgatgacaccacagccaat
gggatggtgcgctaccggatcctgtcccagaccccccacatgcccatccccaacatgttc
accatcaacagtgagacgggagacatcttcaccatggctgctggcctggacagggagaaa
gtgtcccagtacatcatcatcgtccaggccacggacatggaggggaacctgaactttggc
ctgtccaacacggccaccgccctcatctctgtgaccgacatcaacgacaatcctcccgag
ctgaccgccaggacgttttcgggggaggtcccagagaacagtgtgaatgtggtggtggcc
aacctgacagtgattgacagggatcagccccacagccctaactgggctgcccagtaccgc
atcgccagcggagacccccagggtcacttcctcatccgcaccaaccctgtcaacaacgac
ggcatggtcactgtggtcaagccggtggactatgaacagaacagggccttcatgctgact
gtgatagtctctaacaaggcccctctggccagtgggatccagtcttctctccagtcttca
gcgggggtcaccatctccgtacaggacgtcaacgaatcccctgtcttccccaccaacccc
aagtccatccgttttgaggagggtgtccctgcaggcaccacactcaccgtgtttgctgcc
caagaccctgacctcttcatccagcaaactgtcaggtactccaagctgtctgaccccgct
aactggctgaggatcaacaggaccaatggtcagatcaccaccatggctgtgctggacagg
gagtctatgtacgtcaggaacaacatctacgaggccaccttcctggctgccgacaatggt
aagtctggttctcccccggccagtggaacaggtactctgcagatccatctgatagatgtg
aatgacaatgctccggtgatgatgcccaaggaggcccagttgtgtgaacgcgccaatccc
cgctccaaggtcaacatcacagcctccgatgccgacgctgacccccatgtggggcccttt
gtgtttgagctgccctcctacccccccagcatccgacgcaactggaccatctcccggatc
agtggtgactatgcccagttgagactgaggattccctacctggatgcagaggtgtatgat
gttcccatcatcgtgtcggactccggtaacccgcccctctctaacaggtccataataaag
gtcaaggtgtgtccgtgtgatgacaacggagactgtactaccaccggagctgtggctgct
gccggactggggaccggagccatcatagccatactcatctgcatcatcatactgcttatc
ctggtgctagtgtttgtgatgtggatgaagcgcagggagaaggagcgtcaggccaagccc
ctgctgatcgacccagaggacgacgtcagagacaacattctgaagtacgacgaggaggga
ggaggagaggaggaccaggactatgacctgagccagctgcagcagcctgagtctgtggag
cacataatcagtaaaccagtgggggtgcgcagggtggacgagaggcccatcatcgctgag
tcccagtaccccgtcagacccagcctgccccaccctggagacatcggagacttcataaac
gacggtctgagggcggcggacaacgaccccacggccccgccctatgactccctgctggtg
tttgactatgagggcagtggctccacggccggctctgtcagctccctcaactcctctagc
tcaggagaccaggactacgactacctcaacgactggggcccccgcttcaagaagctggca
gacctctacggcgggggagaggatgactga
DBGET
integrated database retrieval system