Oncorhynchus gorbuscha (pink salmon): 124003667
Help
Entry
124003667 CDS
T07892
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5-like isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124003667
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
124003667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
PH_9
FYVE_2
PH_11
Motif
Other DBs
NCBI-GeneID:
124003667
NCBI-ProteinID:
XP_046168122
LinkDB
All DBs
Position
LG18:complement(47293403..47369372)
Genome browser
AA seq
1563 aa
AA seq
DB search
MNDKWFGCSRGWFLKMDTDFKKPPLAPKPKLVSHLTFKLPSPLMSRPCSSARGPKPPIAP
KPTVRHDPEERDSFLLCNNAQEGCTNGDLLSSDEDRDQENEPEDCLSGGKGLEEEEPVEP
QYDSYSLSSGVNDPENGYEEQMEPVEEEEMMQEKEEDWRLTDNVQAEEVDSLDTLGVSDA
GFTIYSVDSVEVIDTDITDEIDTEGCYAGEALADTDGFSITSIEEEEAACYFCETWPGKE
KKENVEEEHQIEEEEAEEEAADTTADTETESLSEEHIDLLVKDNVEEDLVTQEPSSFKEE
DEGEVEESSPYPGSPTNVLQEDFGYDVIGPSEERAQRYQPYSIIDEEPMTVQYSMEEGER
QHSKHKAKQLFNTEEEAVDPSLEPYYISTEDIVDPEQSPAEGKGDGSAESESTPEESSLV
TTETTEPSEYAAIGDDDSLCEDMGHIECVSSEDYVEIGDDDDDDDDDRENMTGSCQRRMP
VVQRVEAFLNQSNNQPRFRLVSISVPADTDTSQASSFSDSQLRSPDDSDVFRDEEDLEGH
IIPYLDETTDIEGNLSDEHVYEEAGLDSEGENFLPFDRKSIVTRSRSLSGKVPGYVPDTV
PEEAGSEFHLQNYCEVDLDRSGPALSSSPMLNSTWAKSSSKQHRFLLYPRSFSMEGRELP
LCVYREGQGSPGERREDSLSLPCVMGSSGSFTQQSPLPSSGLSTPTSMVDIPPPFELAYI
TKKPITKSSPSLFIEGDSPDRQKKKKSSFKRFLMLKFRRKTESKLLVDVNVSSSRSSPES
SHHGPARVLDLERRSTGSSPQLKSRMVSKPQRSPESPSTFLFYKDGKRKGGSVAFLNRSV
ARVESFEDRSRAPYTPLPLTKPRSISFPNTDMSDYENIPAQTLSSDYENIQIPSRKPVRP
GTFAEFFDHTSRVLSSANDTDGYVDMSSFPGFERKAQSPEQEPESAYTEAYTVCAIAVGS
PGGSEVEAGGGIVEEEEDQEQTSEEEEGGADNTYDRRTDGRSRAFYIAKELVDTERLHVK
ALKLLQEDFREAVGAAVGDEGDPVLEEERLREILNELPDVYTLHRRILTELENRIRQWEE
SQRIADVILSRKSEFVVFTTYIGHYDRSMSLLDESCRTSPAFSAIVRQYEQQSPAGDNVS
LKHQLLQVIVRVAQYCMLLNDYLNNLSPDSKEYEDTQAALLIVSDVADQANDSLKHGENL
LRLVNIEYSVRGQRDLLQPGRVFVKEGTLMKVSRKFRQPRHLFLMNDVLLYTYPQQDGKY
RLKNTLILTGMKVSKPIIEDVQNALRIEGADISITLAASSCSEREDWFHTLSRTVSDHAR
GPGTFSSSSGEARERLWLSLGEKAPTLVPVSHVMMCMNCTSDFSLTLRRHHCHACGRIVC
RSCSRNRYPLKYLKDHMAKVCDHCYSELKKRGGDVSGASGTDSPRSNRRSSRPLSAVFQN
IHPPSLWRHRKGTASLSQASVSEEGSMSGTLQRSKRSKRNWKRLWFQLKDKVLYTYQARE
EKVASESLPLLGFTVKLPDRPGGEETTNVFELYHKKTLYYTFKAENNHTAERWVNAMEEA
TVL
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataaatggttcggatgctcgcgcggatggttcctgaaaatggatacagatttt
aagaagcctcctcttgctcctaaaccaaaacttgtgagtcaccttaccttcaagcttcct
tccccccttatgtcccggccctgctcctcagccaggggccccaaacctcccatcgccccc
aaacccacagtacgacatgaccctgaggagcgcgactctttcctactctgcaacaacgcc
caggaggggtgcaccaacggggacctgctgtcctcagatgaggaccgtgaccaggagaac
gagccagaggactgtctgagtggagggaaggggctagaggaggaggagccagtggaacct
cagtatgactcatactctctcagttcaggggtcaacgatcctgagaatggttatgaagag
cagatggaaccggtggaggaggaggagatgatgcaggagaaagaggaggactggaggtta
actgacaatgttcaggcagaggaggtggattctctggacacactgggggtcagtgatgct
ggtttcacaatttattcagtggactcagtggaggtaatcgacacggacatcactgatgag
attgacacagagggctgctatgctggcgaggcgctggccgacacagatggcttctctatc
accagcattgaggaggaggaggcagcatgctacttctgtgaaacttggcctgggaaagaa
aaaaaggagaatgtagaggaagagcaccaaatagaggaagaagaagcagaagaagaagca
gctgataccacagcagatacagaaacagaatctctctctgaggaacacatagatctcctc
gtcaaagacaacgtagaggaggaccttgttacccaagagccttcatccttcaaggaggag
gatgaaggggaagtagaggaatcctcaccttaccctggtagtcctaccaatgtcctacag
gaggactttggatatgatgtcattggtccctcagaggagagagcacaaaggtatcaacca
tattccataattgatgaagagcccatgactgttcagtacagtatggaagagggtgagcgc
caacacagcaaacataaagcaaaacaacttttcaacacagaggaggaagcagttgaccct
agcctggaaccctactacatctcaactgaggacattgtggatccagagcagagccctgca
gagggcaaaggtgacggatcagcagagagtgagagcacaccggaagaatcttcactggtc
acaacagagaccacggagcccagtgagtacgcagccataggtgacgatgactccctgtgt
gaggacatgggtcatattgagtgtgtctcttctgaggactacgtcgagataggagatgac
gatgatgacgatgatgacgacagggagaacatgacaggttcatgtcagagaaggatgcct
gtagtccagagggtggaggctttcttgaaccagagtaacaaccagccccgtttcaggctg
gtgtccatctctgtgccagcggacacagacacctcccaggcctcatcgttctctgacagc
cagctgcgctccccagatgactctgatgtgttcagggatgaggaggaccttgagggccac
atcattccctacctggatgagacaaccgacatagaaggtaaccttagtgatgagcatgtc
tacgaagaggcaggcctggactcagagggggagaatttcctgccttttgacagaaaatcc
attgtgaccaggtcccggtcgttgtcagggaaagtgcctggttacgtgcctgatacggtt
cctgaggaggcgggctccgagttccaccttcagaactactgcgaggtagatttggaccgg
agcggacccgcgctgagcagcagtcccatgttaaactcaacctgggccaagagctcatcc
aaacaacatcgctttctcctgtacccccgctccttctccatggagggacgggaactgccc
ctgtgtgtgtacagggagggccagggttccccaggggagaggagggaggacagcctctcc
ctgccctgtgttatgggctcttctggaagcttcacccagcaaagtcccctgccctccagc
ggcctgtccacccctacttcaatggtggacatccctcctccctttgagctagcatacatc
accaagaagcccatcaccaagagctctccatccctgttcatcgagggggactccccagac
aggcagaaaaagaagaagtcctccttcaagcgcttcctgatgctgaagttcaggaggaag
acagagagcaagctgctggtggacgtcaatgtgtcctcctccaggtcctcccctgagtcc
agccaccacggccctgccagggtccttgatttagagaggcgcagcacaggcagctccccg
caactcaagtcccggatggtcagtaagccccagcggtctccggaatccccctccaccttc
ctgttctataaggatgggaagagaaaagggggttccgtggccttcctcaaccgcagtgtg
gcacgggtggagtcctttgaggaccgctcccgcgccccctacacccccctccctctgacc
aagccccgctccatctcctttcccaacactgacatgtcagactacgagaatatccctgcc
cagaccctcagctccgactatgagaacatccagatcccttcccggaagcctgtacgacct
gggacctttgcagagttctttgaccacacgagtcgggtgctgtcctctgccaatgacact
gatggttacgtggatatgagtagcttccctgggtttgagagaaaagctcagtcgcctgag
caagagcctgaaagtgcctatacagaagcctacaccgtgtgcgccatagctgttggttca
cctggcgggtcagaggttgaggctgggggcgggatagtggaggaggaggaggaccaagaa
caaacctctgaggaggaggagggaggagcagataacacatatgacagacggaccgacggt
cgatccagagccttctacattgccaaagagctggtggacactgagagattacatgtgaaa
gccctcaagcttctccaggaggacttcagggaggcggtgggggctgcagtaggggatgag
ggggatcctgtgctggaggaggagcggctgagagagatcctcaatgagctgcccgatgtt
tacactctgcaccgcagaatcctcactgagttagagaaccgcatccgtcagtgggaggag
agccagaggattgcggatgtcatcctatccaggaagtcagagtttgtggtctttacgact
tacatcggtcactacgaccgcagcatgagcctgctggacgaaagctgccggacctcgccc
gccttctcagcaatcgtccgccaatatgagcagcagagtccggcaggagacaatgtctct
ctcaaacaccagcttctgcaggtcatcgtacgggtggctcaatactgcatgctcctcaat
gattacctgaacaacctctccccagactccaaagaatatgaagatacacaagccgcactg
ctgatagtatcagacgttgcggatcaagccaatgacagtttgaaacatggggagaacctg
ttgcgtctggtcaacatagagtacagtgttcgaggccagagggatctgctccagcctggc
agggtgtttgtgaaggagggcactctgatgaaggtcagcaggaagttcagacagccacgc
cacctgtttctgatgaatgatgtgctgctgtacacctaccctcagcaggatgggaaatac
agactgaagaacaccctcatactgactgggatgaaggtcagtaaacccatcatagaggat
gtgcagaacgctctgaggatcgagggagcagacatctccatcaccttggcagccagctcc
tgtagtgagagagaggactggttccacactctgagtcggacagtgtctgaccacgccaga
ggacctggaactttcagcagctcctctggagaggccagagagcgtctgtggctgtccctg
ggggagaaggctcctactctggtgcctgtatcccatgtgatgatgtgtatgaactgcacc
tcagacttcagcctcacactgcgcagacaccactgccacgcctgcgggaggattgtgtgt
cggagctgctccaggaacagataccctctgaagtacctgaaggaccacatggccaaagtg
tgtgaccactgttacagcgagctcaagaagagaggaggagatgtgtctggggcgagtggt
actgacagtcctcgttctaaccgtcgctccagccgcccactctctgccgtcttccagaac
attcaccctcccagcctgtggagacaccgcaagggtaccgcatctctgagccaggcgagt
gtgtcagaggagggctctatgagtggtactctacagcgcagtaagaggagcaagaggaac
tggaagaggctgtggttccaactcaaagacaaggtgctttacacctaccaggcccgcgag
gagaaggtggcgtctgagagtttgcctctgttgggcttcacagtgaagctgcctgacagg
ccaggtggagaggagacaaccaacgtctttgagctgtaccacaagaagaccctgtactac
acctttaaggccgagaacaaccacactgctgagagatgggtgaatgccatggaggaagcc
acagttttatag
DBGET
integrated database retrieval system
