KEGG   Oncorhynchus gorbuscha (pink salmon): 124003690
Entry
124003690         CDS       T07892                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510  Focal adhesion
ogo04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124003690
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124003690
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C EGF_Teneurin ATG17_like
Other DBs
NCBI-GeneID: 124003690
NCBI-ProteinID: XP_046168169
LinkDB
Position
LG02:49218120..49256309
AA seq 1790 aa
MFIFQIATMMLSAGSCVLAQVGIPEFSDVCTEGSCYPATGDLLIGRAHQLSTNSTCGLHQ
PERFCIVSHLQDEKKCFLCDSTNVYVKSVVNTTTGHRVENVVTTFAPNRLKTWWQSENGL
EKVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCAAAYPAIS
PGPMQKVDDIICDSHYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNMLKITNLRVKFT
KLHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHASECAPVDGAGAGDGVEGMVHG
HCMCNHNTMGLNCEKCQDFYHELPWRPAKGRNTNACKKCNCNQHSGSCHFDMAVYVSTGN
VSGGVCDECQHNTVGHNCEQCKPFYYQHPERDIRDPSICEPCNCDPVGSLNGGVCDRMTD
VSSGLITGQCRCKPNVEGERCDQCQQAHYGLGDHPLGCLACTCNTLGTVPGGSPCHTDSG
DCFCKSLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGALNNDCSQETGQCACREHMFG
RRCDQVESGFYFIALDHYTYEAEDAKFGPGLTVVQRPRPQDRSPTWTGIGFVNVPEGAYL
EFSIDNIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPSLISADSRCANTMPDDDNQMISL
HPGSRYMVLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTG
SVGGDVATNSAWDTFQRYRCLENSQSVVKTPSTDICRNFIFSVSALLHRGAKACQCDPQG
ALSTVCAASGGQCQCRPNVVGRNCDKCAPATFLFGPSGCRPCDCNPQGSEDAFCHEATGQ
CVCIPGAYSRQCDRCLPGHWGFPNCRLCTCNGHTEQCDPYSGKCLGCREQTTGHNCERCL
DGYYGDPVLGSGDHCRLCMCPDGPGSGRQFAGECYLGLDSPYQVFCVCSPGYRGARCEEC
APGYYGNPHENGGQCQPCQCNNNIDMLDQESCNVRTGECLKCLYHTEGQGCHGCKLGYYG
DALTQNCRKCVCNHLGTNPATCPAMGDCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMAS
ETGCDACDCDPNHSFGTSCNELSGQCSCKPGFGGKTCRECRELFWGEPEVKCNACDCDPR
GIAEQQCHKANGRCVCVEGVSGPRCDVCTRGYSGTFPYCERCHQCFADWDLVVGQLTNQT
HRLVNKVNTIKASGITGPYKHTIDNMEQSAGAIRTILAQNPATQPLSEIQQLLEQATDLM
EKMSNKLNLTEEALAQVSSDDNSTNTKLDSLKEDTQKLDRTVKDLLDQVEFIKNTDIRGA
TDSVTKYYQQSLAADARANASTSGPGNPVESSAILRQATEDKMNDTREEFHRRQEEHAKR
LDDLAGQLETLDLSELNVKTCGSPADASCVDSPCGGLSCVDFEGNRRCGGEGCGGLVTLA
NNAWQKAKDFDQEILTAMEEVDKLAKMVSEAKVKADEAKMSAQNVLLKTNGTKQRVDQSN
EELRSLIRQIRDFLTEDAADLESIEAVANEVLAMQMPTTPAQLQTLTDEIRERVGDLAHV
ETILNQSSDDIQRAESLLEQARRVSKEATNVRDTAEMVKQVLEEAERAQSAAAKAIKQAT
TDIKGTNDLLTSVESETVDSEYKLNNATQRLLRLERDVTLLREKTLNTSLSSEQTEKDAE
SINKVAEQVKKDLDSELKDKYSTVEDLITQKAGGVANAKKRAELLQQEAKDLLLQASDKL
QLLKDLEKSYEDNQKTLEDKANQLVDLEKSIKELLQEISHKVTVYSTCLF
NT seq 5373 nt   +upstreamnt  +downstreamnt
atgtttatatttcaaattgcgaccatgatgctatccgcagggtcgtgcgtccttgcccag
gtaggcatacccgagttcagcgatgtatgcacggaggggagctgctacccggctaccgga
gaccttctcattggcagagcacaccaactctccaccaactccacatgtggcctccaccag
ccggagcggttttgtatcgtcagtcatttacaggatgagaagaaatgctttttgtgtgac
tccaccaacgtctacgtcaaaagcgtggtgaacaccaccaccggccaccgggtggagaac
gtcgtgaccacattcgcccccaaccgcttgaaaacctggtggcagtcagagaatggcctt
gagaaagtgaccatccagctgaacttggaggcggagtttcatttcacccacctcatcatg
accttcaagaccttccggcctgctgctatggtgatcgagcgctcggctgactttgggaag
aactggcaggtgtaccgctactttgcatacgactgcgcggcggcataccctgccatatcc
ccggggcccatgcagaaagtggatgacatcatctgcgattcgcattactccgacatagag
ccgtcgacagagggagaggtcatcttccgagttttggatccagctttccgtattgaagac
ccctacagccccagaatccaaaacatgttgaagatcaccaacctgagggtgaagttcacc
aagctgcacaccctgggagacaacctgctggactcccgcatggagatcaaggagaagtac
tactacgccgtctacgacatggtggtccggggtaactgcttctgctacggacacgcctcc
gagtgcgcccccgtcgacggggctggggctggggatggagtggagggcatggtgcatggc
cactgtatgtgcaaccacaacaccatggggctaaactgtgagaagtgtcaggacttctac
cacgagctgccctggagaccagccaagggacgcaacaccaatgcctgtaaaaagtgtaac
tgtaaccagcactcaggctcgtgtcacttcgacatggcagtttacgtctctacgggtaat
gtgagcggcggtgtgtgtgacgagtgccagcacaacaccgtgggtcacaactgtgaacag
tgcaagcctttctactaccagcacccagagagggacatccgcgaccccagcatctgtgaa
ccatgtaactgtgatccggtgggctccctgaacggcggggtctgtgacaggatgactgat
gtgtcatctggactgatcactggccagtgtcgctgcaaacccaatgtggagggagagcgc
tgtgaccagtgccagcaggcccactatggcctgggtgaccaccctctgggctgcctggcc
tgcacctgtaataccctggggacagttcctggagggagtccgtgtcatacagactcagga
gattgtttctgcaaaagcctggtcacagggagagactgtgaccaatgtatgcctcagcac
tgggggctcagcaatgatatggatggctgcagaccatgtgactgtgacctgggtggagcc
ctcaataacgactgttctcaggagactggccagtgtgcgtgtagagaacacatgtttggc
cggcgctgtgaccaggtggagtcaggcttctatttcattgccctggaccactacacctac
gaggccgaggacgccaagtttggacctggtttgacagtagtgcagagacctcgcccgcag
gaccgtagccccacctggacagggataggttttgtcaacgttcccgagggggcctacctg
gagttctccattgacaacatcccccactccatggagtatgacatcctcatccgctacgag
cctcagttaccagaccagtgggaggaggtgttgatgacagtgatgcggcccagtttgatt
tcagcagacagtcgctgtgccaacaccatgcccgatgacgacaaccagatgatatccctt
catcccggatcacgatacatggtgctccccagaccagtgtgtttcgaggcagggatgaac
tacactgttcgtctgagcctgcccctctactctgcactcagtgacgtccagtccccatat
acacttatcgactcgattgtgctgatgccccactgtaagaacctggagatcttcactggt
tctgtgggaggtgacgtggccaccaacagtgcctgggacacgttccagcgttaccgctgt
ctggagaacagccagagcgtagtgaagaccccgtccacagacatctgccgcaacttcatc
ttcagcgtatctgctctgctgcaccggggagctaaagcatgccagtgtgacccgcagggc
gccctcagcacggtgtgtgccgccagcggtgggcagtgccagtgtcgccccaacgtggta
ggcaggaactgtgacaagtgtgcccctgccaccttcctttttggacccagtggctgcaga
ccctgtgattgcaatccccagggctcggaggatgcgttctgccacgaggctacaggccag
tgtgtgtgtatccccggggcatacagccgtcagtgtgaccgctgtctgccgggtcactgg
ggcttccccaactgtcgcctctgcacctgcaacggtcacacagagcagtgcgacccctac
tccggaaaatgcctgggctgccgagaacagaccactggacacaactgcgagaggtgtctg
gatggttactacggcgaccccgtcctgggttcaggggaccattgtcggctctgtatgtgt
ccggatgggcccggaagcgggcgacagtttgccggtgaatgttacctcggtctggactcc
ccttaccaggtgttctgtgtctgcagccccgggtacagaggtgccagatgtgaggagtgt
gccccaggttactatggaaacccccatgagaacggtgggcagtgccaaccctgccagtgc
aacaacaacattgacatgctggatcaggagtcctgtaatgtcagaacgggtgaatgtctc
aaatgtctctatcacaccgagggtcagggctgccacggctgcaagctgggttactatgga
gatgccctcacgcaaaactgcagaaagtgtgtttgtaaccacctgggcaccaatccagcc
acgtgcccggcgatgggtgactgccactgtgatctgggcagtgggcagtgccagtgtcta
ccgaatgtggtgggtcagcactgtgaccagtgtgcccccgacacctggaacatggccagc
gagacgggctgcgacgcctgcgactgtgaccccaaccactcatttgggacttcctgcaat
gagctgagtggccaatgctcctgtaagcctggctttgggggtaaaacgtgtcgggagtgc
agagagctgttctggggagaacctgaagtgaaatgcaacgcatgtgactgcgacccgcga
ggcatcgccgagcagcagtgccacaaggccaacggtcgctgcgtgtgcgtggagggcgtg
tctggtccccgctgtgacgtctgcacccgtggctactctggcaccttcccctactgcgaa
cgctgccaccagtgcttcgccgactgggacctggtcgtgggtcagctgaccaatcagacc
cacaggctggtcaacaaggtgaacaccatcaaggccagcggcatcaccggaccctataaa
cacaccatagataacatggagcagagcgccggggccataagaactatcctggcccagaac
ccggctacacagccactgtcagagatacagcagctactggagcaggccacagatctaatg
gaaaagatgagcaacaagctgaacctcactgaggaggcgctggcccaggtatcatctgat
gacaacagcaccaacaccaaactggactcactcaaagaggacacccagaaactggatcgc
accgtcaaggatctgctggaccaagtggagttcatcaagaacactgacattcggggagcg
acagacagtgtcaccaagtactaccagcagtctctggctgcagatgctcgcgccaacgcc
tccactagtggcccaggtaaccctgtggagagctctgccattttacggcaagcaacagag
gacaagatgaacgacaccagggaggagttccacaggaggcaggaagaacacgccaagaga
ctggatgacctggcaggacaactggagacactggacctctcagaactcaatgtgaagacg
tgtggcagcccagctgatgcgtcgtgtgtggactctccgtgcggagggttgagctgtgtg
gacttcgaggggaacaggaggtgcggtggcgaagggtgcggcggtctggtcaccctggcc
aataacgcctggcagaaggccaaggactttgaccaggagatcctcacggccatggaggaa
gtggacaagctcgccaaaatggtgtcggaggccaaggtgaaggcggatgaggctaagatg
agtgcccagaacgtgttgctgaagaccaacggtaccaagcagcgtgtggaccagagcaac
gaggagctgcgcagcctcatccgacaaatcagagacttcctcacggaggatgcagcggac
ctggagagcattgaggcagtggccaacgaggtgctggccatgcagatgcccaccacacca
gcccagctccaaaccctgacagacgagatcagggagagagtaggagacctagcccacgtg
gagaccatccttaaccagagctccgacgacatccagagagccgagagcctactggagcag
gcacgcagagtcagtaaagaggcgacaaacgtgagggacacagcagagatggtgaagcag
gttctagaggaggctgagcgtgcccagagcgcagcggccaaggccatcaaacaggccacc
acggacatcaaaggcaccaatgacctcctgacctcagtggagtcggagacagtggactcg
gagtacaagctgaacaacgccacccagaggctgctgcggttagagcgggacgtcacgctg
ctcagagagaagacactgaacacctcactcagctctgaacaaactgaaaaagacgcagag
agcatcaacaaagtggctgagcaggtcaaaaaggatctggactcggagctgaaggataag
tacagcaccgtggaggacctgatcacacagaaggccgggggcgtggccaacgccaagaag
agggcggagcttctacagcaggaagccaaagacctcctgctacaggccagcgacaagctg
cagctgctgaaagatttagagaagtcgtatgaggacaaccagaagactttggaagacaag
gccaaccagttggtggatctggagaagtccatcaaagagcttctgcaggagatcagtcac
aaagtcactgtctacagcacctgtctgttttaa

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