Oncorhynchus gorbuscha (pink salmon): 124003702
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Entry
124003702 CDS
T07892
Name
(RefSeq) ras-related protein Rab-40C-like
KO
K07928
Ras-related protein Rab-40
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124003702
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ogo04031
]
124003702
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
124003702
GTP-binding proteins [BR:
ogo04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
124003702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
Motif
Other DBs
NCBI-GeneID:
124003702
NCBI-ProteinID:
XP_046168192
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All DBs
Position
LG18:complement(8185231..8193366)
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AA seq
295 aa
AA seq
DB search
MRGMMATQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYPYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAYKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRSIVSCTPVHLIDKLPLPMAIKSHLKSFSMANGMNAVMM
HGRSYSVATNAAGGSVSNNNSSSSSKGNSLKRSKSFKPPPSPPKSSSSKSICNIT
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggatgatggctacacagggcagccctgtcaagagttacgactacctcctgaaa
ttcttgctggttggagacagtgatgtggggaaaggagagatcctagacagtctgcaggac
ggatcagcagagtctccctatccctacagcagtgggattgactacaagactaccacaatc
ctgttggatgggagaagagtcaagttagagttgtgggatacgtctggacagggtcgattc
tgcacaatcttccggtcatattcacgtggggcacagggaatcctgctagtttatgatatc
acaaatggctggtcatttgatggcattgaccgctggatccgggagatcgatgagcatgcc
ccgggggtgccccgcatcctagtaggtaaccggctccacctggcctataagaggcaggtg
cccacggagcaggcccgcgcctacgccgagaagaacggcatgaccttctttgaggtcagc
cctctgtgcaacttcaacgtcatcgagtcgttcacggagctgtcgcgcatcgtgctgatg
aggcacggcatggagaagttctggagaccaaaccgagtgttcagcctccaggacctgtgt
tgccgctccatcgtctcatgcacccccgtccacctcattgacaagctgcctctccccatg
gccatcaagtcccacctcaagtccttctccatggccaacggaatgaatgctgtcatgatg
catggacgctcctactccgtggccaccaatgcggcgggcggcagcgtgagcaacaacaac
agcagcagcagcagcaagggaaacagtctcaaacgctccaagtcctttaaaccgcctccg
agcccccccaagagtagcagcagcaaaagtatctgtaacatcacctag
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