Oncorhynchus gorbuscha (pink salmon): 124003856
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Entry
124003856 CDS
T07892
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124003856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124003856
03036 Chromosome and associated proteins [BR:
ogo03036
]
124003856
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124003856
Coactivators
SAGA/TFTC/STAGA complex
124003856
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
124003856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
124003856
NCBI-ProteinID:
XP_046168426
LinkDB
All DBs
Position
LG02:50133745..50164963
Genome browser
AA seq
1003 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLVSQKTSPATFSDIKREGSTGTVSQFSGK
VRDQVGSLEPPQQGHPKAVLNAEPCANQAISNKSITASTSSITTGGIINAGTNLQTHGAA
SRIISPAPPGSVTLPVQTTSYNRGTVLGPAETSAVTAPNSNLTTTTAIRTPSPGLQSFNG
SPGAVKLVNSPAAAPQIGLGGNTVISTASAGNSNIIVSMASQPPSLPNYPVSQSVAFVTP
TVALQRHPNPMASASQNGVIDPKVSAVVTQGAGSPGATTSQVMNRNNTLINTTMVAPNQP
VSAGQSIILGGSPSPVVVNSPISQAQSVASPTLAAGVKPTVNGVGQPTVTIVRPPGAPVM
ATSVQQQRPGLVASPTRTVAPQMVVRPPQQTTIQLPPGFTIPPGMVLVRTDTGQLVMVPQ
QVLAQAQAKTQQGQAAVSNICPRPATPTAGTTIRVSTPSQAPCTTQAVRLASPVQARMLQ
SPSPTSSAIQKAITVAPAGASVSVKMTTPQKAQTVITGGQALAKPGAVRPSMTFNTAAAA
SASTTPTMVTAPVSQEMQENVKKCKNFLSTLIKLASHNSPSPDTSKNVKALVQDLLDAKI
EPEEFTTRLQAELKSSPQPYLIPFLKKSLPALRLSLLNNQQTLLASTNASALAAASTTTT
SAIRARLPTTVSPATGIVRTPTTSLGVRRPGVQGVQTRMPMVIPQTIRPQGTVARGLTII
AGRSPVGIGAQASANQKKLNEPGGGTFRDDDDINDVASMAGVNLNEENARIMATNSELVG
TKIRSCRDEAFLPPGLLHRRIMETAKRFGVTEVPAEAVNYISHATQARLRSVLEKVSTIA
QHRTDGGKDEEWYEPSTDVRAQLRFFEQLDRMEKQRKDEQEREVLIKAAKSRARQEDPEQ
ARLKAKAKEMQQAEQAQIRQREANLTALAAIGPRKKRKMDSPGSSTSGTEVALGSGAGSS
TAASSRQQLRQRITRVNLRDFIFCLEQERVTSRSLLLYKALLK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtagacgaaaaagca
gtaagtgacttagttggctctttggaatcgcaacttgtcagccaaaagacttcgcccgcc
acattttccgacatcaaacgagaaggatctacgggcactgtcagccagttctcagggaaa
gtgcgtgatcaagtggggtctctggagccgccacaacaaggacacccaaaagcggtgtta
aacgcggaaccctgcgcgaatcaggcgatttcgaacaagagtatcaccgcttctacctct
tccatcactactgggggcattataaacgctggtaccaatttacaaacacatggagccgca
tctcgcatcatttctcccgcaccaccaggatcggtaactttgcctgttcagacgactagc
tacaacagagggactgttttgggtccagctgaaacatcggcggtgacggctccgaactca
aacctcacaacaacaacggctatcaggactccttcacctggattacagagttttaacggt
agccccggagctgtgaagttggtcaactcgccagctgctgctccccaaatcgggttaggc
ggcaacactgttataagtactgccagtgcgggcaactcaaatatcattgtgtctatggct
tcacagcctccttctctaccaaactatcctgtatctcaatctgtggcatttgttactccc
actgttgcattgcaaaggcatcccaaccccatggccagtgcctcacagaatggagtaata
gaccctaaggtttctgcagtggtcacacagggtgcaggttctccgggggccaccacctct
caggtcatgaaccgcaataacactcttattaacactacaatggtggcacccaaccagcca
gtctctgctggccaatcaatcattctcggagggtctccctctcctgttgttgtgaactca
cccataagccaggcacaaagtgtggcgagtcccactctcgcagccggggtgaaaccaacg
gttaacggagttggtcagcccacggtgaccatcgtgaggccccccggtgctcctgtgatg
gccacctccgtgcagcagcagagacctgggctggtagcgagtcccacgaggactgtggca
ccacagatggtcgtcagaccaccacagcagaccaccattcagttaccccctggatttacc
atacctcccggtatggtgctggtgcgtacagacacaggccagctggtaatggttcctcag
caggttctagcccaggctcaggctaagacccaacaaggccaggctgcggtctctaacatc
tgcccccggcctgccacacctaccgctgggaccaccatcagagtcagtactcccagccag
gccccttgtacaacccaggctgttcgtctggcctcccctgtccaggccagaatgttgcag
tccccctctcccaccagctctgctatacagaaggcgataaccgtggctcctgcaggtgcg
tctgtgtcggtgaagatgaccacccctcagaaagcccagacagtgatcacagggggtcaa
gccctggccaagcctggtgctgtacggccctctatgacctttaacactgcagcagcagcc
agtgcctccacaacccctacaatggtaactgcaccagtctcccaggaaatgcaagaaaat
gtgaagaagtgcaagaacttcctgtccaccctgatcaagctggcgtcccacaactcccca
tctccagacacatccaagaacgtcaaggccctggtgcaggatcttctggatgctaaaatc
gagcctgaggagttcaccacacgtctgcaggctgagctgaagtcctctccccaaccgtac
ctcatccccttcctcaagaaaagccttcctgccctgcggctgtccctgctcaacaaccag
cagactctgctggcctccaccaacgcttctgccctggccgctgcctccactactaccacc
agcgctatcagggcccggctccccaccaccgtcagccccgccacaggcattgtcaggaca
cccaccacttctctgggtgtgagaagaccaggggttcagggggtccagactcgcatgccg
atggtcatccctcagaccatccggccacaaggcacagttgcaagaggactcactattatt
gcaggcagatcccctgtgggcattggtgcccaggcctctgccaatcagaagaagctgaat
gagcctggaggcgggacgttcagggatgatgatgacatcaacgacgtggcgtccatggcg
ggggtgaacctgaacgaggagaacgcccgcatcatggccaccaactctgagctggtgggc
accaagatccgctcctgtagggacgaggccttcctcccgccaggcctgctgcacagacgc
atcatggagaccgccaagaggtttggggtgacagaggtcccagctgaggcagtgaactac
atctcccatgccacccaggccaggctgagatccgtgctagagaaagtgtcaactatcgcc
cagcaccgcactgacgggggcaaggatgaggagtggtatgagccgtcgacagacgtcagg
gcccagctccgcttctttgagcagctggacaggatggagaaacagaggaaggacgagcag
gagagggaggtcctaatcaaggctgccaagagtcgcgccaggcaggaggacccagagcaa
gctcggttgaaggcgaaagctaaagagatgcagcaggcggagcaggcccagatccggcag
cgtgaagccaacctcactgccctggctgccatcggtccccgcaagaaacgcaagatggac
tcgccagggagctccacatcgggcacagaggttgctttgggttcaggggctggctcttcc
acagccgcctcctcccgccaacagctccgtcagcggatcacgcgagtcaatctcagggac
tttatcttctgcctggagcaggagagagtcacatcccggtccttactgctctataaggct
ctcctgaagtag
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