Oncorhynchus gorbuscha (pink salmon): 124003874
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Entry
124003874 CDS
T07892
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta-like isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124003874
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124003874
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
124003874
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
124003874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
FN3_Tor_3rd
Fn3_Dep-1_4th
PTP_tm
Ig_ILCR1
Tc-R-P
PTP-SAK
PTPlike_phytase
PTP-NADK
DUF7014
DSPc
Motif
Other DBs
NCBI-GeneID:
124003874
NCBI-ProteinID:
XP_046168459
LinkDB
All DBs
Position
LG02:50343394..50391253
Genome browser
AA seq
2042 aa
AA seq
DB search
MFRCSTVILILCLRWSCVKVETTKAVRCSFNLTKTSANTDSIALELITTGEACNFTVFYE
TSRSDITDCYQHGEYTNVYICDIRDLEPGTLHQFEVISKNDGERVNVSVRTDPVGPSRLD
VLPDQIQATQYKSPIQGQGGSHGLHISWPRSRGQVDWYEVTLQDTKTGTSRITRVMGTAA
TQSRFTALTPGTLYALSLVATAGNKTALPVLATAATAPSAVSGLQLSPSSSSLGVSWQPG
PGRREGFRVLLREQQGALVRNVTLKSSVTSHILDDLLPGTLYTVTVVTEAEGLQNAISKQ
AVTVPVAVTELFLENHGSLDTLRASWVNARGGVEAYLVSLATLGSANQDRKLPPNATEVV
FSGLTPGRPYQVTVRSKVGEQTTEAVATGRTVPAKVSQLSMVGVIDGSTLKSTWLPPRGD
WENYRVLLLNGTVALVNETVSRLVRQYSFSVASLGLVPGRLYTAQVMVESGLFGNTAQCQ
GRLAPQPVQQLMVRHGDETSLSVLWSRPAGVWDGYTVVLRQGDTVVSQRTLSRDARECTF
NVLMPGRQYAIAVTTNSGGLNSSASVIGRTTPAQVTSLRVTNGGSTDSLQTQWERAAGEL
DSYRVLLIHDSSVIKNESTPAHTTAYSFLALKPGALYRVVVTTVRAGQASRQSVAEGRTV
PAAVGEVTVSNNGRMDFLSVSWRPAQGDVDSYLVTLKDRERTVHTLAVSKSSPECVFKSL
VSGRLYNISIVSRSGVYENHTIVQERTQPSSVQNPTAIHSARDDYLKVYWRHAAGDFDYY
QVVIKHNNIFHQNKTVMKSQNECVFNGLVPGRLYTVIVSTWSGKYETSVSTDGRTFPAAV
RSLALAGRGTEDLRVAWLAALGDVDHYEVQLLFNDMKVFPPITLGSSAGACVLSSLTPGR
LYKIHISTFSGPNQRAQFIEGRTVPSKVKNIHVSNNGQSNSLQISWTPGQGDVDSYSVSL
SLDGPEGRMLETRPVPKHPNQLGFNSLQPGQLYSVTVRSISGILLNNNTASGRTVPSAVT
GLQADNRHTTCTIQVSWQEARGVVDGYSLQLLDDRGHLVTNSSQASSGSTPLQHHFDGLT
PGKRYHVLVHTTSGGVRSEGVTAEARTRPAAVSDLSIQANSSSSLSFHWSPPEGELEGYD
LYLYNGDDTLYDRRSGQPNTLQVSFQGLRPGAPYRMVVLTRSGEQTNDSAIWARTVPAAV
TSLQARSHPQTEELRVSWERAEGELSGYLLSVYNPDGSQQAEEALGPDATEYAVPTLIPG
RLYHADILTRSGELTNRATTQGRTAPRPPTSVSFGGVTNTSLELTWSGPAGSDYDDFDLQ
WEPRDHLSVFNPYHTRTSGSRILKGLYPGRLYNFSLRTVSGAVGGVGEDGSPAYSLPIHK
SIRTKPERVQYLHCRPQNSTSISCSWGPPEADCDSYTIECLHQDSRTLVYSRRTGRDSTL
YHITQLEPHKRYTVSIKAISDSMTSEAAEDSVVTMIDRPPLPSLSTRVNNSAALITKNTI
FFKFNCSWFSDINGAVKFFTVVVTESENNENIQPEQHHPLPSYLDYKLNSSVKAYQTSYF
PSRCTEGLDSETQSFAISLGTGMDTLGGACDHLQAQDREQDPDKHRDHPFCDGPLKPKTA
YRLSVRAFTQLFDEEQSRYTPPLYTDTYLSLPLVTEAEPLSGVIEGISAGMFLIVMVVGV
TALLICRQKVRKVSVQERRVVRLSMRRERPTSGVHMGVRGNRRISSPVKIMHFESHYTKL
QADSNYLLSEEYEDLKDVGRNQPLDTALLPENRGKNRYNNILPYDLTRVKLSYVDDDPCS
DYINASYIPGNNFRREYIATQGPLPGTKDDFWKMVWEQNVNNIVMVTQCVEKGRVKCDHY
WPFDQEPLYYGDLIVQMLSESVLPEWTIREFKICSEDQLNYSRVVRQFHYTVWPDHGVPE
TTQSLIQFVRTVRDYVNRTPGSGATVAHCSAGVGRTGTFISLDRVLQQLDTKDTVDIYGA
VFDLRLHRSHMVQTECQYAYLHQCMRDVLRARKLRSEQENPLYPIYENVNPDPQRDMVYA
RR
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atgtttagatgttcgactgttattttgatactttgtttacggtggagttgtgtcaaggtc
gagaccacaaaggcagtaaggtgttcatttaacctgacaaaaaccagcgccaatacggat
tctattgcactggaattgataacaacaggagaagcgtgtaacttcaccgtgttttatgag
actagtcggtccgacataacggattgttatcaacatggggagtacactaatgtgtatatc
tgcgatataagggatttggaaccaggaacattacaccaattcgaagttatatcgaagaat
gatggagagagggtcaacgtatcagtgcgcacagacccagtgggtccatccaggttggac
gtactaccagaccagatccaagcaacccagtataagagtcctattcagggtcagggtggc
tcccatggcctgcacatatcctggcctcgatctcgtgggcaggtcgactggtatgaggtc
acactacaggacaccaaaacagggacgagccgcattacccgcgtcatgggaactgccgcc
actcagtctcgcttcaccgccctcacccctggaaccctctatgccctcagcctggtggca
acggctgggaataaaacagccctgccagtgctggccactgcagccacagctccctcagct
gtcagcggcctccagctctcaccctcctccagcagcctgggtgtttcctggcagcccggt
ccaggcaggagagagggtttcagggtgctactgagggagcagcagggcgccctagtcagg
aacgtcacccttaagagtagtgtcacctcccacatccttgacgacctgttgcctgggacc
ctctacactgtcaccgtggtgactgaggctgaaggcctccagaacgccatctccaaacaa
gcagtcacagttcctgtggcggtaacagagctcttcttggagaaccacggcagtctggac
accctgagggcctcctgggtcaatgctaggggcggcgtggaggcatacctggtctccctg
gcaaccctaggctcagccaaccaggataggaagcttccccccaacgccactgaagtggtc
ttcagcggcctgacccctggacggccctatcaggtcactgtgaggtcaaaggtcggagag
cagacaactgaggcagtggccacaggcagaacagtgccagccaaggtgtctcagctgtcc
atggtgggcgtcattgatggcagcactctgaagagtacatggttgcccccaagaggggac
tgggagaactatcgtgtcctgctactgaacggcacggtggctctagtcaatgagacagtg
agcaggctggttagacagtactccttctctgtagcttccttggggctggtgcctggcagg
ctctacacagctcaggtcatggtggagagcggtctgtttggcaacaccgctcaatgtcag
gggaggctagcccctcagcctgtccagcagcttatggtccgtcacggtgatgagacgtct
ctgagcgtgctgtggtctcgccccgcgggggtgtgggacgggtacaccgtggtcttgaga
cagggggacactgttgtgtcacagaggacactgtcccgtgacgccagggagtgcacattc
aacgtcctcatgcccggacgccagtacgccatcgccgtcacgaccaacagtgggggccta
aacagctcggcttcagtgattggacgaaccaccccggcgcaggtgaccagtctgcgtgtg
accaacggtggcagcacagacagcctccaaacccagtgggagcgggcggccggcgagctg
gactcgtaccgtgtgctgcttatccacgacagcagtgtgatcaagaacgagagcaccccg
gcccacaccacggcctacagcttcctggcgctgaagcctggagccctctacagggtggtg
gtcaccactgtcagggccggacaagcctccagacagagcgtggcagagggaagaacagtc
cctgctgccgtaggcgaggtgacagtcagtaacaacggtcgtatggacttcctcagtgtg
tcgtggcgaccagcccaaggtgacgtggatagttacctggtcaccctgaaggaccgcgag
aggaccgtccacaccctggccgtgtccaagtccagccctgagtgtgtgttcaagtccctg
gtgtctggacggctctataacatctccattgtctcccgcagtggagtctacgaaaaccac
accatcgtgcaggaacgcacacagccctctagtgtccagaaccccacagcgatccactcg
gccagggatgactacctgaaggtgtactggcgccatgcggcaggggactttgactactac
caggtggtcatcaagcacaacaacatcttccaccagaacaagacagttatgaagagccag
aacgagtgtgtgttcaacggcctggtgcccgggagactctacactgtcatcgtcagcacc
tggagcgggaagtatgagaccagcgtgtccacggacggaaggaccttccctgcggcggtg
agatcactagctctggctgggcggggcacggaggaccttcgtgtcgcctggctggctgct
ctgggggatgtggatcactacgaggtgcagctcctcttcaacgacatgaaggtgttccca
cccatcaccctgggcagcagcgcgggggcgtgtgtcctgtcctccctcaccccgggacgc
ctctataagatccacatttccaccttcagcggacccaaccagagggcccagttcatagag
ggcaggacagttcccagcaaggtcaagaacatccacgtgagcaacaatgggcagagcaac
agcctgcagatcagctggaccccggggcagggtgacgtggacagctactctgtgtcgttg
tcactggacgggccagagggacgcatgctggagacgcgacccgtacccaaacacccaaat
cagctgggattcaactccctgcagcctggacagctgtacagtgtgactgtaaggtctatc
agtggtatactgttgaacaacaacacggccagcggacgcaccgtcccctctgcagtgacg
ggcctgcaggctgacaacagacacaccacctgcactattcaggtgagctggcaggaggcc
cggggagtggtggacggctacagcctgcagctgctggacgacaggggacacctggtcacc
aacagctcccaggcctcctctgggtccactccactccagcaccacttcgacggcctcacc
ccggggaagaggtaccacgtcctggtccacaccaccagcggaggggtccgcagtgagggg
gtcaccgctgaagcacgcacgcgtccggcggcagttagcgacctctccatccaggccaac
agcagcagcagcctgtccttccactggtctcccccagagggagagttggaaggttacgac
ctctacctgtacaatggagacgacaccctgtacgaccggcgcagcggccagcctaacacg
ctgcaggtctccttccagggcctgaggcctggtgccccctacaggatggtggtgttaaca
cgcagcggagagcagaccaatgactcagctatctgggccaggactgtcccagctgcagtg
acgtctctgcaggcccgaagtcatccccagacggaggagctccgggtgtcgtgggagcgt
gcagagggggagctgagcggctacctgttgtctgtctacaacccagatggctcccagcag
gcagaggaggctctagggcccgacgccacggagtatgccgtccccacactgatccccggg
cgcctctaccatgctgacatcctcacccgcagtggagagctcacaaacagggccaccact
cagggcaggaccgcacccagacccccaacctctgtgtcattcggcggggtcaccaacact
tccctggaactgacctggagtggtcctgcaggcagcgactacgacgactttgacctgcag
tgggaaccgcgggaccacctgtctgtgttcaacccctaccacacccggacctccggcagc
cgcatccttaagggcctgtaccccggacgcttgtacaacttcagcctgcgtactgtcagt
ggggctgttggtggtgttggtgaggatgggagccctgcctacagcctgcccatccacaag
agcatccgaaccaagccagagcgtgttcagtacctacactgccgcccccagaactccacc
tccatctcctgctcctggggccccccggaggccgactgtgactcctacaccattgagtgc
ctccaccaggactcccgcaccctggtgtactcccggcgtacgggccgcgacagcaccctc
taccacatcacccagctggagccgcacaaacgctacaccgtctccatcaaggctatctcc
gacagcatgaccagcgaggccgctgaggatagcgtggtcaccatgatcgaccgccctccc
ctcccttccctcagcacccgggttaacaacagcgctgctctcatcaccaaaaacaccatc
ttcttcaagtttaactgcagctggttcagtgacatcaacggagcagtcaagttcttcaca
gtggtggtgaccgagtctgaaaacaatgaaaacattcaaccagagcagcaccaccctcta
ccctcctatctggactacaaattgaacagttccgtcaaggcctaccaaaccagctacttc
cccagccgctgcacagagggattagacagcgagacccagagctttgcgatcagcctgggt
acgggtatggacaccctcgggggggcatgtgaccacctacaggcccaggacagggagcag
gacccagacaaacacagagaccaccctttctgtgatggtccactcaaacccaaaactgca
tacaggctcagtgtgcgtgcgttcacccagctttttgacgaggagcagagcagatacacc
ccgcccctctacacagacacttacctgtccctccccctggtcacagaagcagagcccctg
agcggtgtgatcgagggcatcagtgccggtatgttcctcattgtcatggtggtgggagtc
actgcactgctcatctgcagacagaaagttcgcaaagttagtgtgcaggagcggcgggtg
gtccgactgagcatgaggagggagaggcccacatcaggagtgcacatgggcgtcaggggt
aaccgtcgtatttcaagccccgtcaagatcatgcactttgagtcccactacaccaaactc
caggctgactccaattatctactgtctgaggagtacgaagacctgaaagacgtaggaagg
aaccagcccctggacacagccctactgccagagaacagggggaagaaccgatacaacaac
atccttccctacgacttgacccgtgtgaagctgtcctatgtggatgatgatccgtgctct
gactacatcaacgccagctacattcctgggaacaacttccgtagggagtacatcgccact
cagggcccacttcctggaaccaaggatgacttctggaagatggtgtgggagcagaatgtc
aataacattgtcatggtgacgcagtgtgtggagaaaggcagggtgaagtgtgatcactac
tggccctttgaccaggaacctttgtattatggagacctcatagttcagatgctgtctgag
tctgtgctgccagagtggactatccgggaattcaagatttgcagcgaggaccagttgaac
tactccagggtggtgcgtcagttccactacacggtgtggcccgaccacggtgtcccagag
accacccagtcactcatccagtttgtcaggaccgtcagggactatgtcaacaggacccct
gggtctggggccactgtagctcactgcagtgctggtgtgggccgtacagggactttcata
tccctggacagagtcctgcagcagctggacacaaaggacacagtagacatctacggagct
gtcttcgacctgcgtctccaccgctcacacatggtgcagactgagtgccagtatgcatat
ctccaccagtgtatgagagacgtcctccgagccaggaagcttcgcagtgagcaggagaac
cccctctaccccatctatgagaatgtcaaccctgacccccaaagagatatggtgtatgcc
agacgttaa
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