KEGG   Oncorhynchus gorbuscha (pink salmon): 124004256
Entry
124004256         CDS       T07892                                 
Name
(RefSeq) WD repeat-containing protein 82-like isoform X1
  KO
K14962  COMPASS component SWD2
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124004256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    124004256
   03036 Chromosome and associated proteins [BR:ogo03036]
    124004256
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     124004256
Chromosome and associated proteins [BR:ogo03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     124004256
    COMPASS/SET1 complex (yeast)
     124004256
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_NOL10_N WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st DSE1_N Beta-prop_SPT8 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 PAC11 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IFT140_1st MinC_C
Other DBs
NCBI-GeneID: 124004256
NCBI-ProteinID: XP_046168996
LinkDB
Position
LG18:34991347..34999467
AA seq 314 aa
MKITDSVLRSFRVARTFRENSQKVNCVDYSSNGESAISSSDDDSIVLYDCQEGKPIRTLY
SKKYGVDLIRYTHGDANTVVYSSNKLDDTIRYLSLTDNKYIRYFPGHTDRVVALSMSPVD
DTFISGSLDMTIRLWDLRSPNCQGLTNPLGKPVCSYDPEGLIFAAGVDSEAIKLYDLRSF
DKGPFASFETLFSRVCEWTGLKFSRDGKQILISTNGGAIRILDAFNGSVLHTFSGYNNSK
GISLEACFTPDSDFVMIGSEDGRVHVWSTESGMKIAVLDGKHSGPINTLQFNPKYMTFAS
ACSNMAFWLPCVGD
NT seq 945 nt   +upstreamnt  +downstreamnt
atgaagattacggacagcgtgttgcgaagttttagggttgctaggacattccgggagaat
tcgcagaaagtcaactgtgtggactacagctcgaacggcgagagtgcaatatctagtagc
gacgacgactccattgttttatatgactgtcaggagggaaaaccaatacggaccctgtac
agtaagaagtacggagtagaccttatccggtatacacatggggatgccaacacagtggtc
tacagctccaacaaactagatgataccatccgatacctgtctctcactgacaacaagtac
atccgctacttccctgggcacactgatagggttgttgctctctccatgtcaccagtggat
gacacatttatctctggttccttggatatgaccatacgactctgggacctgcgctctcca
aactgtcagggtcttactaatcctttggggaagcctgtttgctcctatgaccccgagggc
ctgatattcgctgctggggtcgattctgaggcgattaaactgtacgacctccgctccttt
gacaagggcccattcgcctcctttgagactctgtttagccgtgtctgtgagtggactgga
ctgaagttcagcagggacgggaagcagattctcatctctaccaacgggggtgctattcgg
atcctagatgccttcaatggatccgttctgcacactttctcgggctacaacaacagtaaa
ggcatttcattggaggcctgcttcacaccagactcagactttgtcatgattggttcagag
gatgggagggtccatgtgtggagtacagagagtgggatgaaaatagctgttctggacggg
aagcattcaggaccaatcaacacactgcagtttaaccctaaatacatgacgtttgccagc
gcctgctccaatatggcgttctggcttccctgtgtaggagactga

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