KEGG   Oncorhynchus gorbuscha (pink salmon): 124004778
Entry
124004778         CDS       T07892                                 
Name
(RefSeq) thrombospondin-3a-like
  KO
K04659  thrombospondin 2/3/4/5
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04145  Phagosome
ogo04510  Focal adhesion
ogo04512  ECM-receptor interaction
ogo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124004778
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124004778
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124004778
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124004778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124004778
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124004778
   00536 Glycosaminoglycan binding proteins [BR:ogo00536]
    124004778
Membrane trafficking [BR:ogo04131]
 Endocytosis
  Phagocytosis
   Opsonins
    124004778
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124004778
  Exosomal proteins of colorectal cancer cells
   124004778
  Exosomal proteins of bladder cancer cells
   124004778
Glycosaminoglycan binding proteins [BR:ogo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   124004778
SSDB
Motif
Pfam: TSP_C TSP_3 COMP EGF_CA EGF_MSP1_1 cEGF EGF_3
Other DBs
NCBI-GeneID: 124004778
NCBI-ProteinID: XP_046169520
LinkDB
Position
LG19:complement(17147342..17161140)
AA seq 955 aa
MGARRDVPTFLALFTFLFVATCEPMDQKYMQVIDMLTLDSKTSVSAVEKVTGAMSVFSDI
YIVSTFRLPPKMGGVLLGLYSKEENKKYLELAIMGKINKALVRYVKEDGKIHTVNLQSTN
LADGRTHSIILRIGGLRRDNLHLELYVNCRLADSSQGLPPLVPLPAEKVEIRNGFKAYAR
LQGAVESLKIALGGSVAKAGTLTDCPFQGDSSVYSTVGTTAEVNSILGDHTKALIGQLII
FNQILGELREDIREQVKEMSLIRNTILECQVCGFQDPRSRCSPNPCFKGLSCMETFDYPG
YRCSPCPEGMTGNGTHCQDIDECSIAQPCYSPGACINTVKGFSCELCPPGLWGPPLFGVG
LEYANHHKQECADIDECIEVANACVPHSMCINTIGSFRCGGCKVGYLGNQTVGCVPRRSC
ATLSFNPCDANAHCIIERNGEVSCACNIGWAGNGNTCGTDTDIDGYPDRSLPCMDNDKHC
KQDNCVYTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLEPNKDQQNSDTDSFGDA
CDNCPNVPNIDQRDTDSNGQGDACDNDIDGDGIPNVLDNCPKVPNPMQTDRDGDGVGDAC
DSCPEISNPMQTDIDNDLVGDVCDTDQDTDGDGHQDSRDNCPDHPNSSQLDSDNDGLGDD
CDDDDDNDGFPDVQDNCRLITNPNQKDSNSNGVGDVCENDFDNDSVWDLIDVCPESSEVT
LTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFH
INTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSTPFRAMAQPGLQLKAVKSRTGPG
EYLRNALWHTGDTNEEVKLLWSDPRNVGWRDKTSYRWQLSHRPQVGYIRVKLYEGTEMVA
DSGVVIDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTVPDDFNPYRKQVLLHIKV
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgggtgcgaggcgcgatgtgccaacttttctggctctattcacatttctattcgttgca
acatgtgagccaatggatcagaaatatatgcaagtcattgacatgctaacgctggactcc
aagaccagtgtgtctgcggtggagaaggtgacaggtgccatgagtgtgttcagtgacatc
tacatcgtgtccacattccgcctgcctcccaagatgggaggggtgctgctgggcctctac
agcaaagaggagaacaagaagtacctggagctggccatcatgggaaagatcaacaaagct
ctggtgcgttacgtgaaggaggatggcaaaattcacacagtgaacctccagagcacaaac
ctggctgatggtcgcacacactccattattctccggatcggaggcctgcgcagagacaac
ctacacctggagctctacgtcaattgtcgattggctgactccagccagggcctccctcca
ttggtccctctccccgcagagaaggtggagattcgtaatggcttcaaggcctacgcaagg
ctacagggtgctgtggagtccctcaaaattgcactagggggcagtgtggccaaagcaggt
accctgacagactgtccattccagggggattcatcagtctacagcacagtcggtacgact
gcagaagtgaactccattctaggagatcacacaaaggctctgattggtcagctgatcatc
tttaaccagatcctaggagagctgcgagaggacatcagagagcaggtgaaggagatgtcc
ctgattaggaacaccattctggagtgccaagtgtgtggcttccaagaccctcgttcccgc
tgctcccccaacccctgttttaagggcctgtcctgcatggagacctttgactacccaggg
taccgctgtagtccctgtccggagggcatgacgggcaacggaacccactgccaagacatt
gatgagtgttccatagcccagccctgctactctccaggtgcgtgtataaacacagtgaag
ggtttcagctgtgagctctgcccccctggtctctggggcccacccctctttggggtcgga
ctggagtacgccaaccaccacaaacaggagtgtgcagacattgatgagtgtattgaagtt
gccaacgcctgtgtgccccactccatgtgtatcaacaccatcggctcgttcaggtgtggt
ggctgtaaggtgggttacttggggaaccagacagtgggctgcgtgccccgtaggtcctgt
gccacactcagctttaacccttgtgatgccaacgcccactgcatcatagagcggaacgga
gaggtgtcctgtgcgtgcaacattggctgggccggtaacgggaacacttgtggcacagac
acagacattgatggatacccagaccgctctctgccctgtatggacaatgacaagcactgt
aaacaggacaactgtgtttacacacccaactcaggccaggaggacgcagacaacgacggc
atcggagaccagtgtgacgaggacgcagatggggacggcatcaagaatgtggaggataac
tgtcgactagaacccaacaaagatcagcagaactcagacacagactctttcggtgacgcc
tgtgacaactgtcccaatgtccctaacattgaccagagggatacggacagcaacgggcaa
ggagacgcctgtgacaacgacatagatggagatggtatccccaacgtgctagacaactgc
cccaaggtccccaaccccatgcagacagacagggatggagacggggtaggagacgcctgc
gacagctgccctgagatcagcaaccccatgcagacggacattgacaatgacctggtgggg
gatgtgtgtgacactgaccaggacactgatggggacggtcaccaggattccagggacaac
tgccctgaccatcccaacagctcccagctggactcggacaatgatggccttggggacgat
tgtgacgatgacgatgacaatgacggattcccagacgtacaagacaactgcagacttatc
accaatcccaaccagaaagattctaacagtaacggggtgggcgatgtgtgtgagaacgac
tttgacaacgattcagtctgggatctgattgatgtgtgccctgagagttcagaggtcaca
ctgacagacttcagagcctatcagacagtcattctggatccagagggcgatgcccagatc
gatcccaattgggtggtgctcaatcagggcatggaaatagttcagaccatgaacagtgat
cctggtttagctgtgggctacacagcattcaacggggtggactttgagggcaccttccac
atcaacacggtgacggacgacgactatgcaggcttcatcttcggctaccaggactcctct
tccttctatgtggtgatgtggaaacagacagagcagacctactggcagtcgacacccttc
agggctatggcccaacctggcctgcagctcaaagcagtgaagtcccgtacagggcctggt
gagtacctgcgtaacgccctgtggcacacaggggacaccaacgaggaggtgaagctgctg
tggtcggacccacggaatgttggctggagagacaagacatcttaccgctggcagctcagc
cacaggccccaggtgggctacatcagggtgaagttatatgaggggacggagatggtggct
gactctggcgtggtgattgacactaccatgagaggcggacgactgggggtcttctgtttc
tcccaagagaacatcatctggtccaacctgcgctaccgctgcaatgacacggttccagac
gacttcaacccatatcgcaaacaggttctgctgcacatcaaggtgtga

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