Oncorhynchus gorbuscha (pink salmon): 124004778
Help
Entry
124004778 CDS
T07892
Name
(RefSeq) thrombospondin-3a-like
KO
K04659
thrombospondin 2/3/4/5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04145
Phagosome
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124004778
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124004778
09144 Cellular community - eukaryotes
04510 Focal adhesion
124004778
09142 Cell motility
04820 Cytoskeleton in muscle cells
124004778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124004778
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124004778
00536 Glycosaminoglycan binding proteins [BR:
ogo00536
]
124004778
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Phagocytosis
Opsonins
124004778
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124004778
Exosomal proteins of colorectal cancer cells
124004778
Exosomal proteins of bladder cancer cells
124004778
Glycosaminoglycan binding proteins [BR:
ogo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124004778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_MSP1_1
cEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
124004778
NCBI-ProteinID:
XP_046169520
LinkDB
All DBs
Position
LG19:complement(17147342..17161140)
Genome browser
AA seq
955 aa
AA seq
DB search
MGARRDVPTFLALFTFLFVATCEPMDQKYMQVIDMLTLDSKTSVSAVEKVTGAMSVFSDI
YIVSTFRLPPKMGGVLLGLYSKEENKKYLELAIMGKINKALVRYVKEDGKIHTVNLQSTN
LADGRTHSIILRIGGLRRDNLHLELYVNCRLADSSQGLPPLVPLPAEKVEIRNGFKAYAR
LQGAVESLKIALGGSVAKAGTLTDCPFQGDSSVYSTVGTTAEVNSILGDHTKALIGQLII
FNQILGELREDIREQVKEMSLIRNTILECQVCGFQDPRSRCSPNPCFKGLSCMETFDYPG
YRCSPCPEGMTGNGTHCQDIDECSIAQPCYSPGACINTVKGFSCELCPPGLWGPPLFGVG
LEYANHHKQECADIDECIEVANACVPHSMCINTIGSFRCGGCKVGYLGNQTVGCVPRRSC
ATLSFNPCDANAHCIIERNGEVSCACNIGWAGNGNTCGTDTDIDGYPDRSLPCMDNDKHC
KQDNCVYTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLEPNKDQQNSDTDSFGDA
CDNCPNVPNIDQRDTDSNGQGDACDNDIDGDGIPNVLDNCPKVPNPMQTDRDGDGVGDAC
DSCPEISNPMQTDIDNDLVGDVCDTDQDTDGDGHQDSRDNCPDHPNSSQLDSDNDGLGDD
CDDDDDNDGFPDVQDNCRLITNPNQKDSNSNGVGDVCENDFDNDSVWDLIDVCPESSEVT
LTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFH
INTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSTPFRAMAQPGLQLKAVKSRTGPG
EYLRNALWHTGDTNEEVKLLWSDPRNVGWRDKTSYRWQLSHRPQVGYIRVKLYEGTEMVA
DSGVVIDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTVPDDFNPYRKQVLLHIKV
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgaggcgcgatgtgccaacttttctggctctattcacatttctattcgttgca
acatgtgagccaatggatcagaaatatatgcaagtcattgacatgctaacgctggactcc
aagaccagtgtgtctgcggtggagaaggtgacaggtgccatgagtgtgttcagtgacatc
tacatcgtgtccacattccgcctgcctcccaagatgggaggggtgctgctgggcctctac
agcaaagaggagaacaagaagtacctggagctggccatcatgggaaagatcaacaaagct
ctggtgcgttacgtgaaggaggatggcaaaattcacacagtgaacctccagagcacaaac
ctggctgatggtcgcacacactccattattctccggatcggaggcctgcgcagagacaac
ctacacctggagctctacgtcaattgtcgattggctgactccagccagggcctccctcca
ttggtccctctccccgcagagaaggtggagattcgtaatggcttcaaggcctacgcaagg
ctacagggtgctgtggagtccctcaaaattgcactagggggcagtgtggccaaagcaggt
accctgacagactgtccattccagggggattcatcagtctacagcacagtcggtacgact
gcagaagtgaactccattctaggagatcacacaaaggctctgattggtcagctgatcatc
tttaaccagatcctaggagagctgcgagaggacatcagagagcaggtgaaggagatgtcc
ctgattaggaacaccattctggagtgccaagtgtgtggcttccaagaccctcgttcccgc
tgctcccccaacccctgttttaagggcctgtcctgcatggagacctttgactacccaggg
taccgctgtagtccctgtccggagggcatgacgggcaacggaacccactgccaagacatt
gatgagtgttccatagcccagccctgctactctccaggtgcgtgtataaacacagtgaag
ggtttcagctgtgagctctgcccccctggtctctggggcccacccctctttggggtcgga
ctggagtacgccaaccaccacaaacaggagtgtgcagacattgatgagtgtattgaagtt
gccaacgcctgtgtgccccactccatgtgtatcaacaccatcggctcgttcaggtgtggt
ggctgtaaggtgggttacttggggaaccagacagtgggctgcgtgccccgtaggtcctgt
gccacactcagctttaacccttgtgatgccaacgcccactgcatcatagagcggaacgga
gaggtgtcctgtgcgtgcaacattggctgggccggtaacgggaacacttgtggcacagac
acagacattgatggatacccagaccgctctctgccctgtatggacaatgacaagcactgt
aaacaggacaactgtgtttacacacccaactcaggccaggaggacgcagacaacgacggc
atcggagaccagtgtgacgaggacgcagatggggacggcatcaagaatgtggaggataac
tgtcgactagaacccaacaaagatcagcagaactcagacacagactctttcggtgacgcc
tgtgacaactgtcccaatgtccctaacattgaccagagggatacggacagcaacgggcaa
ggagacgcctgtgacaacgacatagatggagatggtatccccaacgtgctagacaactgc
cccaaggtccccaaccccatgcagacagacagggatggagacggggtaggagacgcctgc
gacagctgccctgagatcagcaaccccatgcagacggacattgacaatgacctggtgggg
gatgtgtgtgacactgaccaggacactgatggggacggtcaccaggattccagggacaac
tgccctgaccatcccaacagctcccagctggactcggacaatgatggccttggggacgat
tgtgacgatgacgatgacaatgacggattcccagacgtacaagacaactgcagacttatc
accaatcccaaccagaaagattctaacagtaacggggtgggcgatgtgtgtgagaacgac
tttgacaacgattcagtctgggatctgattgatgtgtgccctgagagttcagaggtcaca
ctgacagacttcagagcctatcagacagtcattctggatccagagggcgatgcccagatc
gatcccaattgggtggtgctcaatcagggcatggaaatagttcagaccatgaacagtgat
cctggtttagctgtgggctacacagcattcaacggggtggactttgagggcaccttccac
atcaacacggtgacggacgacgactatgcaggcttcatcttcggctaccaggactcctct
tccttctatgtggtgatgtggaaacagacagagcagacctactggcagtcgacacccttc
agggctatggcccaacctggcctgcagctcaaagcagtgaagtcccgtacagggcctggt
gagtacctgcgtaacgccctgtggcacacaggggacaccaacgaggaggtgaagctgctg
tggtcggacccacggaatgttggctggagagacaagacatcttaccgctggcagctcagc
cacaggccccaggtgggctacatcagggtgaagttatatgaggggacggagatggtggct
gactctggcgtggtgattgacactaccatgagaggcggacgactgggggtcttctgtttc
tcccaagagaacatcatctggtccaacctgcgctaccgctgcaatgacacggttccagac
gacttcaacccatatcgcaaacaggttctgctgcacatcaaggtgtga
DBGET
integrated database retrieval system