Oncorhynchus gorbuscha (pink salmon): 124004818
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Entry
124004818 CDS
T07892
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124004818
Membrane trafficking [BR:
ogo04131
]
Protein recycling
Others
EARP complex
124004818
Endosome - Golgi transport
Tethering complex
GARP complex
124004818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Sec6
hAT-like_RNase-H
PsaD
NBD94
XhlA
Motif
Other DBs
NCBI-GeneID:
124004818
NCBI-ProteinID:
XP_046169584
LinkDB
All DBs
Position
LG19:complement(48571061..48603715)
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AA seq
829 aa
AA seq
DB search
MMMEEEELEFSEGLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLA
NIDDVVNKIRLKIRCLDDNIRMVVRGQTNVGQDGRQALAEAQVAIGQLFGKIKDIKDKAE
KSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQ
GVVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPAQGSKRAGGPSNVLR
DACLVANVLDPRIKQEIIKKFIRQHLSEYMVLFQENQDVAWLDKIDRRYAWIKRQLVDYE
EKYGRMFPEEWCMTERIAVEFCHITRTELAKVMRTRDKEIEVKLLLFAIQRTTNFEGLLA
KRFSGCTLTNGPGVKKPEPPLESTNPFLEDEVGDDGSEMEEDLDRPKKHKAPDNPFHGII
SKCFEPHLYVYIESQDKNLGEMIDRFVSDFRAQGPPKAGTEDGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSNSGGLTIKSLLQEKEGSEA
AKFNVEELCLICSILSTAEYCLATTQQLEEKLKEKVDKTLVERINLTGEMDTFSNVISNS
IQLLVQDLDAACDPALSAMCKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRGNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADGNPETFQKTLDMKGLKRS
EQSSMLELFRQRLPTPPSGADGGPSLSFSTPEQENSRIRKLEKLIKKRL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaggaggaagaattggaattttcggagggtttggaggctattttgcatctt
actccagaggtgcagttggccatcgagcaggttttccccagtcaagacccattggacaga
gcagattttaatgctgtggaatacatcaatacattgtttcccactgagcagtcactggca
aatatagatgatgtggtcaacaagatccgtctgaagattcggtgtctggatgacaatatc
aggatggtggtgagaggtcagaccaacgtgggccaggatggcagacaggcactggcagag
gcccaggtagccatcggccagctctttggcaaaatcaaagacattaaggacaaggctgag
aaatctgagcaaatggtcaaagagataacgcgggacatcaaacagctggaccatgctaag
cgtcacctgaccacctccatcaccaccctcaaccacctgcacatgctggccgggggcgtt
gactctctagaggccatgacgaggaggaggcagtatggcgaggtggctaacctgctacag
ggggtggtcaacgtgctggagcacttccacaaatacatgggcatccctcagatcagacag
ctctcagagagggtgaaagcagcccaaagtgagctggggactcagatcctggcagacttc
gaagaggccttccccgctcaggggtcaaagagagcagggggacccagtaatgttctgaga
gatgcctgtctggtggccaacgtcttggaccctcgcatcaaacaggagatcatcaagaag
ttcatcagacagcacctctctgagtacatggtgctcttccaggagaaccaggacgtagct
tggctggataagatcgaccggcgctacgcctggattaagcgtcagctggtggactatgag
gagaagtacggacgcatgtttcctgaagagtggtgtatgaccgaacgcatcgctgtagag
ttctgccacatcaccaggacagagctggccaaagtaatgcggacgcgggacaaagagatc
gaggtcaagctgcttctgtttgccattcagaggaccaccaacttcgaggggctgctcgcc
aagcgcttctctgggtgcaccctcaccaacgggcccggggtgaaaaagcctgagccacca
ctggagtccaccaaccctttcctggaggacgaggttggagatgatggttcagagatggag
gaggatctggataggcccaagaagcacaaggctcctgacaaccccttccatggcatcatt
tccaagtgctttgagcctcacctctatgtctacatcgagtctcaggacaagaacctaggg
gagatgattgaccgttttgtgtcagacttccgggcgcagggcccccctaaggcgggcacg
gaggacgggggagcagtgctgcccagctgtgctgacctgtttgtctactataagaagtgc
atggtgcagtgctcccagctcagcacaggagaacctatgatcgccctcaccaccatcttc
cagaagtacctcagagagtatgcctggaagatactgtctggaaacctgcccaagactagc
agtaatagtggaggactgaccatcaagagtctactgcaggagaaggagggttcggaggct
gctaagttcaatgtagaggagctgtgtctcatctgtagcatcctcagtactgcggagtac
tgtctagccaccacacagcagttggaggagaagctgaaggagaaggtggataagactctg
gtggagagaatcaacctgactggagagatggacaccttcagcaatgtgatttccaacagt
atccagttgcttgttcaggacctggacgctgcctgtgatcctgctctctctgccatgtgc
aagatgccatggcagagtgtagaacatgtaggtgaccaaagtccctacgtgacgtcagtc
atcatgcacatcaaacagaacgtccccatcatcagagggaacctggcctccacacgaaaa
tacttcacccagttctgcatcaagttcaccaactcttttattcctaaattcatcaaccac
ttgttcaggtgtaagcctatcagcatggtgggggctgaacagctcctcctggacacccac
tccctgaagacagtgttgttggatctgccctctatagggtctcaggtggtccgcaaggcc
ccagccagctacaccaagatagtcgtgaaggggatgacccgcgctgagatgatcctcaag
gtggtcatggccccccatgaaccctccgtggtgtttgtggataactacatcaagctcctc
gctgatggaaacccagagaccttccagaaaactctggatatgaaggggttgaagcgcagt
gagcagagcagcatgttggagctcttcagacagaggttacccactccaccctcaggggcc
gacggaggcccctctctctccttcagcacccccgagcaggagaactcgcgcatacgcaaa
ctggagaagctcatcaaaaagagactatga
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