Oncorhynchus gorbuscha (pink salmon): 124004827
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Entry
124004827 CDS
T07892
Name
(RefSeq) remodeling and spacing factor 1-like isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124004827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124004827
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
124004827
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
124004827
NCBI-ProteinID:
XP_046169598
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All DBs
Position
LG19:complement(46596143..46612915)
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AA seq
1361 aa
AA seq
DB search
MAALAAAQGSNPGLCPSFAVVCSFLERYGQALDLPELTFPQMERYLRDTSTVSKPLVELH
VKLLRKLGKSVSADKWERYLAKVCQDINSSWAWELEHKGYQDLSMECKTSILKYLCEIQF
DDNLKFKTLVNEEEAEAMRLQPLGRDRQGLMYWLQTDAQHNIRLYTEEQDDWDGSTWRCI
VRTRNDLADALDLLKTQLDPEHKEKEEGETERKKEMDKDKEGGSNFAKTVERGRRHTEEG
EAGGEVKEEEEKARQKRKAEEDKNKSKEREKEEEEDKREKSRSSTYPESTSTDDNMASLA
EKENPTKSEPLFSVKEENIAVEMKEEKEMKKCDEKEEGETQSVRKEERSEVIDNRVSTIT
ALIKEETQMLNNSPSNAVSVVMAPVSATTKQEVHPVKEEAERALRTDQQAKIPLKKRELF
GANRHHSNTHHNNDMHSNQHNNNSHSSSTSSSIIVRNPSVTHTKEEQLGRQSAPPGGLAV
PLPEELTNGGAPLNGLGGLTGGIGHVGVICRSASQQQDGGLFCTDRTRPGAEEGAEMASA
PDKERSRQSVLVRKSPGWGETGAPTPLEPRGQERQAGGDERERKEKGERSSERLGEDGIE
KARERLDGDLSGERDDNTKEKEEKEKKSTLHMENREGCHGTEEEEKKSTSGKKEQESESS
QTVEGPMDQGEALSTDTPAHARVRGAGHGAADRPGPLEASSELQKEGIRLKIKIPPNQRI
ENVREEEKKAEEQGDGRSLRRSARICRPSPNKVKSQDAPPGVRREEEEEKTAQWQKKRAN
PEGQSRTVKSRRRQRGPRWSNTRAKRCKPNEGEERGRKEERGREGSICDSDDSSQSEEMP
NEDPCSHCGLPNHPELILLCDSCDSGYHTACLRPPLMVIPEGEWFCPPCQHKLLCDRLEE
QLQNLDCALKKRDRAERRRERLVYVGISVENIIPQEGEEEEEKLVKKKDAKNTKNLGRRS
TRTRKCISYRFDDFDDAIDEAIEEDVRDEDGGEVGQGKDITTILSEGGKEKRGPTTAQAP
PTRSRKRRRLNDLESDSTAAESEEEFQLSASTEEEEFVASGDEEAASDVDSFASDPGFVS
QSTRAQRRAPKQRTSRTAAKCKKRPRRQRRGWGEEEEESEEEEEEEMETSDLSDSDGDRK
RCGLRRGRKREVNYRETSESECSQATTNKDKAKPRRRRLSSSNSDESSHSRESEEEEKRM
RGKRRREEVEESRTRGKKRRGETMGRGKRRKVLIEQRRKRLALLKKSRPSTKDEEDDNDE
GESESSSEEDRPIRKRLNRIDSDEEEEKEGKNEDEEEEDEEEKKLRKPSSKDKESNSPNG
QQASRGSTQSGADSAALPRDRAAKAGQNRSNSPPPPDQSDA
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttagcggcagcgcagggctcaaaccccggtctctgtcccagtttcgcagtg
gtctgctcgttcctggagcgctacggacaagccctggacctccccgaactcacgtttccg
cagatggagaggtatctccgggacacatcgacagtttccaagccactggtggagctgcat
gtcaagctcctgaggaagcttggcaagtctgtgtctgcagacaagtgggagaggtacctg
gctaaggtatgtcaggacatcaacagtagctgggcttgggagctggaacacaagggctac
caggatttgagcatggagtgcaaaaccagcatcctcaaatacctgtgtgagatccagttt
gatgacaacctgaagttcaagacgttggtgaacgaggaggaggcggaggcaatgaggttg
cagcccttgggcagagacagacagggtctgatgtactggctgcagactgacgcccaacac
aacattcgcctgtatacagaggaacaggacgactgggacggatccacctggagatgtatc
gtcagaacccggaacgacttggccgatgctctggacctcctgaagacccagctggaccca
gaacacaaggagaaagaggagggagagacggagagaaagaaagagatggacaaagataag
gagggaggatccaactttgccaaaactgtggagagggggagaagacacacagaggagggt
gaggctggaggagaggtaaaggaggaggaagagaaggcaagacagaagaggaaggctgag
gaagacaagaacaagagtaaagagagggagaaggaggaagaggaggataagcgagaaaag
agtagatcatctacctacccagaatccactagtacggatgacaacatggcatcgttagca
gagaaggaaaacccaaccaagtctgaaccattattctcagtgaaagaggaaaacattgca
gttgagatgaaggaagaaaaggaaatgaaaaaatgtgatgagaaagaagagggagagaca
cagagtgtgaggaaggaggagaggtcagaagtgattgacaacagagtgagcaccatcacc
gcactcatcaaagaggagacccaaatgcttaacaactcccctagcaacgctgtctccgtc
gtcatggcgcccgtctcggcaacgacaaaacaggaagttcatcctgtgaaggaggaagcg
gagcgggccctgaggaccgaccagcaggccaagataccactgaagaagagagagctcttt
ggcgctaaccgtcaccatagcaacacgcatcacaacaatgacatgcacagcaaccaacac
aacaacaacagccatagcagcagtactagcagtagcatcattgtccgtaacccttcagta
acacataccaaggaggagcagctggggaggcagtcagcgccacctgggggcctagctgtc
ccactgccagaggagctgaccaatgggggggctcccctaaacgggcttggagggctcaca
gggggtataggtcatgtgggggtcatctgcaggtcagcctcgcagcaacaagatggtgga
ttgttctgtacggacagaaccagacctggggcagaggaaggggctgagatggccagcgct
ccagacaaggagaggagcaggcagtcagtcctggtgaggaagagtcctggctggggagag
actggagccccaacacccctagagcctagaggacaggagagacaggcaggaggagatgag
agggaaaggaaggagaaaggagagagatccagtgagagattaggagaggatggaattgag
aaagcaagggagaggttagatggagacctgtctggagagagggatgacaacacaaaagag
aaagaagagaaagagaaaaagtccaccctccatatggagaaccgcgagggatgccatgga
acagaggaagaggagaagaagagtacttcaggaaagaaggagcaggagtcagagagcagc
cagactgtagaaggaccgatggaccagggagaggccctcagcacagacacaccagcccat
gccagggtgaggggagctgggcatggagcagcagaccggccgggtccccttgaggcctcc
tctgagctgcagaaagaagggatcaggctgaagataaagatccctcccaaccagaggata
gagaacgtgagagaagaggagaagaaggcggaggagcagggagatgggaggtctctgcgg
agatcggctcggatctgcagacccagcccaaacaaggtgaagagccaagacgcaccccca
ggagtgaggagggaagaagaggaggagaagactgctcaatggcaaaagaagagagcaaac
cctgagggacaaagcaggactgtaaagagcagacgaaggcaacgaggcccccgctggtca
aacactcgagcgaagagatgcaaaccgaatgagggagaggagagagggagaaaggaggag
agagggagggagggaagtatttgtgactcagatgactctagccaatcagaggagatgcct
aatgaagatccctgcagccactgtggactccccaaccaccccgaactgatcctgctgtgt
gattcatgtgatagtggttaccacaccgcctgcctcagaccccctctcatggtcatacct
gagggagaatggttctgcccaccctgccaacacaaactgctgtgtgacagactagaggag
cagctgcaaaatctggattgcgctctgaagaaaagagaccgagctgagaggaggagggag
cgtctggtgtatgtgggaatcagtgtggagaacatcattccccaggaaggggaggaagaa
gaggagaaactggtgaagaagaaagatgcaaaaaataccaaaaacctgggaaggaggtct
accagaaccaggaagtgtatcagctacaggtttgatgactttgatgacgccattgatgaa
gcgatagaggaagacgtcagagatgaggatggaggagaggtggggcagggtaaggacatt
accaccatcctatcagagggggggaaggagaaacgaggaccaaccacagctcaggcccct
cccaccaggagcaggaagagaaggagactcaacgacctggagagcgacagcacggctgca
gagagcgaggaggagtttcagctcagcgccagtacggaggaggaggagtttgtagcgtca
ggtgatgaggaagcagccagtgatgtggacagctttgccagcgacccgggcttcgtaagc
cagtccacacgggcacagagacgggcacctaaacagagaacctccaggaccgcagcaaag
tgcaagaaacgcccacgcagacagaggagaggatggggggaggaggaggaggagagtgaa
gaggaggaggaagaggagatggagaccagtgatttgagtgacagcgatggggacaggaag
aggtgtggtttaaggaggggccggaagcgggaggtgaactaccgcgagacgtcagaatcc
gagtgttcccaggcaaccaccaataaggataaggctaaaccccggcgccgtcgtctctcc
agctcaaacagcgatgaatcctcccattccagagagtctgaggaggaagagaagagaatg
aggggaaagaggcggagagaagaggtggaggagagtagaacaaggggaaagaagaggaga
ggagagacgatgggccgagggaagcggaggaaggtgttgatagaacagcggaggaaacgt
cttgctctgctgaagaaaagcagaccctccactaaagatgaggaggatgataacgatgaa
ggggaatcggagtcgtcatccgaggaagatcgtcctatccgcaaacgacttaaccgcatc
gactctgatgaagaggaggagaaagagggaaaaaatgaggacgaggaagaagaggatgaa
gaggagaagaagctgagaaagccatcatcaaaagacaaggaatcaaacagccctaatgga
cagcaggcctctagaggctcaacacagtctggggctgatagtgcagccttacccagggac
agagcagccaaagctgggcagaacaggtctaacagccccccacctcctgaccagtcagac
gcatga
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