Oncorhynchus gorbuscha (pink salmon): 124004844
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Entry
124004844 CDS
T07892
Symbol
rpa2
Name
(RefSeq) replication protein A 32 kDa subunit
KO
K10739
replication factor A2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03030
DNA replication
ogo03420
Nucleotide excision repair
ogo03430
Mismatch repair
ogo03440
Homologous recombination
ogo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124004844 (rpa2)
03420 Nucleotide excision repair
124004844 (rpa2)
03430 Mismatch repair
124004844 (rpa2)
03440 Homologous recombination
124004844 (rpa2)
03460 Fanconi anemia pathway
124004844 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
124004844 (rpa2)
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124004844 (rpa2)
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
124004844 (rpa2)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
124004844 (rpa2)
MMR (mismatch excision repair)
124004844 (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
124004844 (rpa2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TFA2_Winged_2
Motif
Other DBs
NCBI-GeneID:
124004844
NCBI-ProteinID:
XP_046169628
LinkDB
All DBs
Position
LG19:26390041..26402389
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AA seq
278 aa
AA seq
DB search
MWNQGGSYGESNMGGGYTQSPGGFASPAASQGGEKKGRQRAQQIVPCTVSQLMSAAQAED
VFKVGEVEVAQVTIVGIIRTTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDPSVDSTVIPP
GTYVKVSGNLRSFQNHRSVVAFNVRPLQDMNEITSHMLEVVQAHMLLSKPQTIMMGGGGG
MNTSKVPMSRQGMGGNMGGGYSGANDMSTNGLSPSQNQVLSLIRSCPDAQGISTQNLKQS
LSGMSLAVIKQAVEFLSNEGHIFSTIDEDHFKSTDNDD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaccaagggggatcatacggtgaatcaaacatgggaggtggatacactcagtcc
ccgggaggattcgcatcacctgctgcctcccagggaggagagaagaaagggagacaacgt
gcccaacagattgtcccctgcacagtgtcccagctcatgtctgctgcccaagcggaggat
gtcttcaaagtgggagaggtagaggttgcccaggttacaattgtgggcatcatcagaacc
actgacaaatccatgaccaacatccagtacaaagttgatgacatgacaggggcccctatg
gacgtgaagcagtgggtagatacagaggatcccagtgtagacagcactgtcatcccccca
ggcacttacgtcaaggtctctggcaatttgcgctccttccagaaccacaggtccgtggtg
gcgttcaacgtccggccccttcaggacatgaacgagatcacctcccacatgctggaggtg
gtgcaggcacacatgctgctcagcaaaccacagactattatgatgggcggaggaggggga
atgaacactagcaaggtgcccatgtcacggcagggaatgggtggcaacatgggaggtgga
tactcgggtgctaacgacatgtccactaacggcctgagcccaagccagaaccaggtgctg
agcttgataaggagctgtccagacgcacagggtatcagcacacagaacttgaagcagagt
ctcagtggcatgagcttggctgtcatcaagcaagcagtggagttcctcagcaacgaagga
cacatcttctccaccatcgacgaggatcacttcaagtctacggacaatgacgactaa
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