Oncorhynchus gorbuscha (pink salmon): 124004917
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Entry
124004917 CDS
T07892
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1B-like isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137
Mitophagy - animal
ogo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124004917
04137 Mitophagy - animal
124004917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124004917
03029 Mitochondrial biogenesis [BR:
ogo03029
]
124004917
Membrane trafficking [BR:
ogo04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
124004917
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
124004917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
DUF6274
Motif
Other DBs
NCBI-GeneID:
124004917
NCBI-ProteinID:
XP_046169690
LinkDB
All DBs
Position
LG02:complement(55960322..56011852)
Genome browser
AA seq
1513 aa
AA seq
DB search
MNPLHGELAAVEVTLPRAGREQWCGPGLYRRRTMASSHQRNSVRILSTRERGSQAFGSQR
LLQQMVEEKVRWMKWQSQKVELPDSPRSTFLLAFSPDRTLMASTHVNHNIYITEVKTGKC
LHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEVRIWDLHGGSESWFTESNVAIASLTFHP
TAQLLLIATNNEIHFWDWSRPEPFAVVKTGSETERVRLVRFDPLGHNLLTAIVNPSNQQN
DDESEVPMDSVEMPHFRQRSFLPSQPVRRTPILHNFLHILSSRSSGAQAGGDASRPGGEG
SGEPPSMPLGQYPASQDRGLPYPGCTQHLGMVCLCSRCMANRSPSLGEGPSTSRPVDHPE
LPQVASQPAPHASTFSARTEPRQPSEPTGAQQRPSAFTTVYYSAGSSLHRAVPTTHVASQ
PLSQQLLPPPANHQHQPSSRPLPGPDWTRSLLNMRSSESGAGSGGSSGGGMGGVGGGMLP
PRTSSSSVSLLSVLRQQDGSSQSPVYTSATEGRGFPLQPGAELGPSPVANQRGGSGGGGG
GGVGSSSGHHPFWDGTRSNPASFRNVLQCNLSRYFMEFDRLQDLELPLGAASMDVGGGEG
GQEQMQELLNNNIDPERPGPSVSSHYQPQPPPPAPTENNPPPFSSAAHSSRGHLNRCRAC
HNLLTFNHDSQRWERTSPASSTSAVSTQEGSSSPWQQPPSPAYEEPHAPSLSRDPHPHPQ
ERERRVAQPPEPSELQPSPGPHVAAMPFPPIASSSAQPGEQTVGLVFNQETGQWERVYRQ
AASSRSTDAPPEALSQEMPVDNPDEDSLRRRLLESSLLSLSRYDMGGSRDHPIYPDPARL
SPAAYYAQRMIQYLSRRDSIRQRSLRYQQNRLRTLSSSSDSPAGNPSAAIENSDVDFEEL
DDNGDRTRHRTPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVL
AGASIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVPNCKIYNDASCDISA
DGLLLAVFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGCYVMVG
LASRRILLHPSTDHMVAQVFRLQQPHGGETSIRMVFNVVYPMAPDQRRHVSINSARWLPD
PGMGLAYGTNKGDLVICRPVLYRSDGESPAEASTEPIFTVNNSGGGTSRTRGTDRPGAPS
RSSWRLDRDMGLMNAIGLQPRHPAPSVTSQGTQTPIVQLQNAETQTEMDLSGPSTSHAAA
YVEAHQEVPSTSRETQGGLEQPQTSRTEASAMGDSSTEAGTSTANTGEAPEYAPGEDALA
RIRRLIAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRGSQTRTGAAACRPSNSDTN
LPVPGHSTASISTSSACPLTITQPQPSQTLLLSLENLSAPTEPGPVWGLPFVSQPQPPSH
ASGAGAGLSVAMDIDNVLEVASRMDNSEPGPSSSLIFSSSSSSRRSYPPSSGTNGNDNNS
SSRDSYPGDPYSR
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctctgcatggcgagctagcagcagtagaagtgactctccctagagcaggcaga
gagcagtggtgtggccccggcctgtacaggaggagaaccatggcctctagtcatcaaagg
aactctgtgcgaatcctgtccacccgggagcgcggctcgcaggcctttggctcccagcgc
ctcctgcagcagatggtggaggagaaggtccgctggatgaaatggcagagtcagaaagta
gagctgccagatagccctcgctccacattcctgttggccttcagcccagaccggaccctc
atggcttccactcacgtcaaccacaacatctacatcacggaggtgaagactggaaagtgc
ctgcattcgctcgtgggccaccgccgcacaccctggtgtgtgacctttcaccccaccatc
cccggcctggtggcctccgggtgccttgacggagaggtccgcatctgggacctgcatggt
ggcagtgagagctggttcacagagagcaacgttgccattgcctcccttaccttccacccc
accgcccagctcctcctcatcgccaccaacaatgagatacacttctgggactggagtcgg
cccgagcccttcgccgtggtcaaaaccggcagtgagactgaaagagtcaggttggtgagg
tttgatcctttggggcacaatcttctgacggctattgtgaacccctccaaccagcagaat
gatgatgagtccgaggtccccatggacagtgtggagatgccccacttccgccagcgctcc
ttcctgccctcccagcctgtacgccgcacgccaatcctccacaacttcctgcacatcctg
tcatcgcgctcatcgggggcacaggctgggggggatgcttcccgccctggcggggagggc
agcggtgagcctcccagcatgcctttgggccagtacccagcctcgcaggaccgtggactg
ccctacccaggttgcacccagcacctgggcatggtgtgcctctgcagccgctgcatggcc
aaccgcagcccttctctgggggagggtccctccacctccaggcctgttgaccaccccgag
cttccccaggtggcctctcagccagccccccacgcctccaccttttcggcccgtacagag
ccccggcagccttcagagcccactggagcccagcagcggccctcggccttcactacagtc
tactacagtgccggcagctccctgcaccgcgccgtgcctaccacccacgtggccagccag
cccctgagccagcagctgttgcccccgcccgccaaccaccaacaccaaccctcatcccgc
cctctgcccggacctgactggacacgcagcctgctaaacatgagaagctcagagagcggg
gccggaagtggagggagcagtggagggggtatgggtggtgttgggggtgggatgctgccc
ccccggaccagctcatcctctgtcagcctgctgtcagtgctgcggcagcaagacggctcc
tcccagtcccccgtctacacctccgccaccgagggacgaggcttccccctgcagccgggc
gccgaacttggccccagccctgtggccaatcagagaggaggaagtggtggtggtggagga
ggaggggtgggctccagcagtgggcaccaccctttctgggatggcacgcgcagcaacccg
gcctcgttccgcaatgtgctccagtgcaatcttagccgctacttcatggagttcgaccgc
ttgcaggacctggagttgccgctgggggccgccagcatggatgtcgggggaggggagggc
ggccaggagcagatgcaggagctgctcaacaacaacatagacccagagagacccgggccc
tccgtgtcctcccactaccagccccagccacccccacctgcccctaccgagaacaacccc
cctcccttctctagcgccgcccactcctcccggggccacctgaaccgctgccgggcctgc
cacaacctgctcaccttcaaccacgactcccaacgctgggagcgcaccagcccagcgtcc
tccacctccgctgtctccacgcaggagggctccagctctccctggcagcagccccccagt
cctgcctatgaggagccccatgcaccatcactgagccgggatccacacccccatccccaa
gagagggagaggagggtagcccaaccccctgagcccagcgagctacagccctccccaggc
cctcacgttgcagccatgcccttcccccccattgcgtcgtcctcggcccagcccggggag
cagacagtgggcctggtgttcaaccaggagacaggccagtgggagcgcgtctatcgccag
gccgcctccagccgctccaccgacgcaccaccagaggccttaagccaggaaatgcctgtg
gataacccggatgaggactctctgagaagaaggctgttggagtcctccctcctctctctc
tcccgctacgacatgggaggatcccgagaccaccctatctacccagaccccgccaggttg
tccccggctgcgtactatgcccagaggatgattcagtacctgtcaaggcgggatagtatt
cgccagcgctcgctgcgctaccagcagaaccggctgaggacactctcctcctcgtcggac
agccctgccggcaacccctcggccgccattgagaacagcgacgtagactttgaggagcta
gatgataacggcgacaggacgaggcacagaacaccgcgcaacgccaggatgtctgctcct
tcgctggggcgcttcgttccccggcggttcctgttgcctgagtatctgccctacgctggg
atcttccacgagaggggacagcctggccttgccactcactcctctgtcaacagggtctta
gcaggtgcctccatcggggacggccagtcggcggtggctagtaacatagccaacaccacc
taccggctgcagtggtgggacttcaccaaattcgacctgcctgagatcagcaacgcctct
gtgaatgtgctggtgccaaactgtaagatatacaacgacgccagttgtgacatctcagcg
gacgggctgctcctggccgtgttcatacctagcagccagcggggcttccctgacgagggc
atcctggccgtgtactccctagcccctcacaacctgggggagatgctctacactaagaga
tttggtcccaatgccatctcggtgagcctgtctcccatgggctgctacgtgatggtgggc
ctagcatctcgcaggatcctgctacatccctccactgaccacatggtggcgcaagtgttc
cggctgcagcagccccacggcggcgagacctccatcaggatggtgtttaatgtggtgtac
cccatggctccggaccagcggcgacacgtcagcatcaattcagccagatggcttccagac
ccggggatgggcctggcctacgggaccaacaaaggagacctggtcatctgcaggcccgtg
ttgtaccggagtgacggagagagcccggccgaagcgagcaccgagcccatattcacagtc
aacaacagtggtggtggaaccagcaggacccgcggtacagatcgaccaggggcccccagt
cgctccagctggagacttgacagagatatgggtctgatgaacgccattggcctccagccc
cgacaccccgccccctcggtgacctcacagggcactcagacgcccatcgtgcagctgcag
aacgccgagacgcagacagagatggacctctccgggcccagcacctcccacgctgctgct
tatgtagaagcccatcaagaggtcccgtccacaagccgtgagacccagggaggtctggag
cagccacaaaccagccggaccgaggccagtgccatgggggactcttcaacagaagccggc
acctccacagccaacaccggcgaggccccagagtatgccccgggagaggacgccctggcg
cggatccgccggctcatcgcagagggcggcatgacggcggtggtccagcgggagcagagc
accaccatggcctccatgggcggcttcggcaacaacattatcgtcagccatcgcatccac
cgcggctcccagacccggaccggcgccgcagcttgtcggcccagcaacagtgacaccaac
ctgcctgtccccggccactctacagcctccatttccacctcctccgcctgccccctcact
atcacccagccacagccttcccagaccttgcttctcagcctggagaacttgtccgctccc
acagaaccaggcccggtgtgggggctgccctttgtctcccaaccacaaccccccagccat
gcttcaggtgctggggccgggctctcagtggccatggacatcgacaacgtgcttgaagta
gccagccgaatggacaattctgagccaggcccctcttcctccctgatcttctcctcttcc
tcctcctctcgtaggtcctaccctcccagcagtggcacaaacggcaatgataacaacagc
agcagcagagatagttacccaggtgacccttacagcaggtag
DBGET
integrated database retrieval system
