Oncorhynchus gorbuscha (pink salmon): 124004950
Help
Entry
124004950 CDS
T07892
Symbol
trpc2a
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124004950 (trpc2a)
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124004950 (trpc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Motif
Other DBs
NCBI-GeneID:
124004950
NCBI-ProteinID:
XP_046169710
LinkDB
All DBs
Position
LG19:65519960..65534282
Genome browser
AA seq
920 aa
AA seq
DB search
MDNITPDQWQAIVNKKLNFPPELIAAIQEDNAILVGSLLSTGDGIIRQLDESEDRLWREA
LNLSIRMGNEDTFSALMLGVKFDFRQIYEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYDIVTMLTKKGHAIPLPHSISCTCLECR
NGRQYDLLKFSLSRINTYRGMASRAYLSITTEDAMLSAFRLSRELRMLSKKEPEFKPQYL
SLEELCQEFAVEMLAMCRNQSEVTTVLNICDDDNEDELDEQTFEEGIPTLSRLRLAVNYN
QKLFVSHPICQQVLSSIWCGNIPGWRGSKTVWKLTVSLGIFFTMPLLCMTYWVAPKSKIG
NTLKIPVIKFLLHSASYLWFIIALLAESIFMELYRDEFASRQQNILYNSLHMIWVVGFFW
SECKNVWAEGLRGYIVDWSNILDMIVLSMYLASFGLRVLIMAIGHFVCQDQNLVEKCAYF
TQTVRDEWWQEDPQLISEILFAVTSMLSFTRLAYILPAHESLGTLQISIGIMIDDMMRFM
FVLMIIGTAFLCGLNNIYVPYATSPHLGRFNETFSFLFWTMFGASNQGYVDMPDFVLAQF
VGRVLYGVFTLVIVIILLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGSTIPV
PFNLVPSPKALFYLLRCFFCCCNRKKIPDYPPIASMSNSTMNNSGVAGMDRVSYRLQVVK
ALVQRYIEAARREFGEAARKDVGNRITELNKGVGRLHSDMKKFYQNLPNRKGDGGNFLGK
YIKGAKNNFKNFDKNEAMGNSPDLLRVNLHLVGVVDEGKKEEGKTEMIPGGVYREKHPHK
QQCQLAVHLLFVPGLVNPWGVTSHSLPGALEPRGQEHGPLWAWEMTMFRDTTPSVSHRCI
GSQNLEDTSSCWMESQSRQV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggacaatattacgccagaccaatggcaggcgattgtgaacaaaaagcttaatttcccc
ccggagctgatagcagccattcaggaagacaacgcaattctggtgggcagcctgctgtcc
acaggggatggcatcatccgccagctagatgaatctgaggaccgtctgtggagagaagcc
ctgaacctgtccatccgcatgggcaatgaggacactttctccgctctgatgctgggcgtc
aagtttgactttaggcagatctacgaggcgctgctggtggcggtggacaccaaccagccc
cgggtggtcaagaggctcctggaccgcctggaccaggaaaagggcaacaagatggatgtg
cgctcattctccatggccatatttgaccactccattgatgactcccagtttgcccccgga
gtgaccccgctgaccctggcctgtcagaaggacctgtatgacattgtcaccatgttgact
aagaagggtcatgccatccctctgcctcactctatctcctgtacctgtctggagtgcagg
aacggccgtcagtatgacctgctgaagttctctctgtctcgtatcaacacctaccggggt
atggccagccgggcatacctctccatcaccacagaggatgccatgctcagtgccttcaga
ctcagtcgggagctacgcatgctctccaagaaagaacctgaatttaagccccagtacctg
agcctggaagagctgtgtcaggagttcgcagtggagatgctggccatgtgtcgcaaccag
agtgaggtcacaacggtcctgaacatctgtgatgacgataatgaagatgaactggacgag
cagacctttgaggaggggattccaaccctgtcacgcctacgccttgcagtcaattacaat
caaaaactgtttgtgagtcatcccatctgccagcaagtgctgtcgtccatttggtgtgga
aacatcccagggtggcggggcagcaagacggtctggaagctcacggtgtctcttgggatc
ttcttcaccatgcctctcctctgtatgacctactgggtcgctcccaagtccaagattgga
aatactttgaagatacctgtgatcaaattcctgctgcactctgcctcctacctgtggttc
atcatcgcccttctagctgagtctattttcatggagctgtaccgcgatgagttcgcatcc
cggcagcaaaacatcctctacaactccctccatatgatctgggtggtcggtttcttctgg
agtgagtgtaagaatgtgtgggcggagggtctgaggggttacatcgtggactggtccaac
attctggacatgatagtactcagcatgtacttggcctccttcggtcttagagtcctcatc
atggcaattggtcattttgtttgccaagaccaaaacttggttgagaagtgtgcctacttc
acccaaacagtgcgggatgaatggtggcaggaggaccctcagctgatctcagagattctg
ttcgctgtgaccagcatgctcagcttcacccgactggcctacatcctgcctgcccatgag
tctctgggtactctacagatctccattggtataatgatagatgacatgatgaggttcatg
tttgtcttgatgatcattggaacagcttttctctgtggactgaataatatctacgtgccc
tacgcaacttctccacatcttggacgcttcaatgaaaccttcagctttctcttctggacc
atgtttggtgcatctaatcaaggctatgtggacatgccagattttgtcctggctcagttt
gtaggcagggtcctgtatggggtcttcactctcgtcattgtcattatcctgctcaatatg
cttatcgccatgatcactaattcattccagaagatagaggatgatgctgatgttgaatgg
aagtttgctcgttcaaagctctacttgagttacttcagagagggctccactatacctgta
cccttcaacctcgtcccctctccaaaggccttgttctacttactgaggtgctttttctgt
tgctgcaaccgaaagaagattccagactatcctcctattgcctctatgtccaacagtaca
atgaacaacagtggagtggcagggatggaccgagtgtcatatcgcctgcaggtggtcaag
gcgctggtacagcgctacatagaagcagcccgcagggagtttggagaggcggcacgtaaa
gatgtggggaaccggatcacagagctgaacaagggggtggggagacttcactctgatatg
aagaagttctatcagaacctgccgaacagaaagggtgatggaggcaacttcctgggcaag
tacataaaaggagcaaagaacaactttaagaactttgataaaaatgaggcaatggggaat
agcccagacctgttacgagtcaatctgcacctcgtaggggtggtggacgaggggaagaaa
gaggaggggaaaacagaaatgatcccaggaggtgtttacagagaaaaacacccccacaaa
caacagtgtcagcttgctgttcacctgctgtttgtgccaggcctggtgaacccctggggc
gtgaccagtcattcattaccaggagccctggagcccagaggccaagagcacggtcctcta
tgggcctgggaaatgactatgttcagggacaccacgccgtccgtgtcacacaggtgtatc
ggatctcagaacctggaagataccagttcttgctggatggaatcccagagccgacaagta
tga
DBGET
integrated database retrieval system
