Oncorhynchus gorbuscha (pink salmon): 124004955
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Entry
124004955 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124004955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124004955
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
124004955
Endosome - Golgi transport
Arf GTPase associated proteins
124004955
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124004955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_6
PH_8
PH_13
PH_9
Motif
Other DBs
NCBI-GeneID:
124004955
NCBI-ProteinID:
XP_046169715
LinkDB
All DBs
Position
LG19:67358471..67481144
Genome browser
AA seq
1826 aa
AA seq
DB search
MSEAEGCVSVWEWLCALHLDQYFPVFQDAGFGTLLECQGLTQDQLETIGIKLPGHRKRIL
VSLQKTHHHTHPEREHDALLTHLAAEGDQKEEERAVFRPSPLGRETPLPAQRPVSRGERP
VPKERSVYREEVRDGERPRPIPKERTKYRSVPVETLDCGQTSPHPNPTFCPTTPNPNSTS
YSTAPILLPRTPLTPHPPRSTPKGPPLRFIPTSLNTPPWHPNPDINITIHTPLQTHRPQY
SSLASPPIPSQYSSLASPPIPSQYPSLASPPIPSQYPFLASPPIPPQYFSLASPPISPQY
PSLASPPIPPQYLSLSSPPIPPQYPSLASLPNPSLYPSLASPPIPAPYLSLASPPIPPQY
LSLASLPRLFHQPDTPSRWGREGESSLLFHQPDTPSRRGREGESPLLFHQPDTPSRWGRE
GESPPLFRPLPPPLPSQLTNMTSLPLLINACPPSPLKSTWWGRALKSLAALLQSHVDLLF
CPPEPHPHIGSDFGDSSDDSEDPDQVYPKPQSVNMADRDVFLPVPGWGKGRYSSLCSDDE
LLDDDNEPISNRQSSWQDYGLSTLQESVYLPVTGRVLAQPPRDGPSPVLKMGWWIRLDKN
PPQGSLYYQRRWVKLDVDYLRYFDNDKEVYSKRIIPTAAITGVTNVGEQKFEVVTTNRTF
LFRAESDFERNEWVSVLQNFTKGGQGGSREITSSVPHSSMTPGSPLTPEQQGYLELRGLR
SKLYTVVSGDKVFLYKNMEDYRLGIGITSIDMNVGNVKDTDRRSFDLTTPYRIFSFLADS
EQHKDQWVEAMREAIGEALSNSEVANQIWAEPSNGCCADCGAAKPEWAAINLCVVVCKRC
AGEHRGLGPSISKVRSLKMDRRVWTEELIQVFLLLGNERLNGFWAANVPPSEALSPTSCS
EDRRRFVSSKYRQGKYRKYHPLYGNQEELNNDVSPSRSGRGAEGLVSGAEGLVVELRVWS
VELRKVFLSVPPPLFCCCIFVRRALASSSLGTMQFGTHTHIHRHTHTHTYTDTYTYTYTD
TYTYTDTHTYTGDIQEDYTVSSWALCINVQCSDVLETLCLVFCGADVNCSTGQVDCPSPL
SLALAHNQKLQAQFLSHNLNTELPRSEVTGVMEPQHYSPQHPVTHNGFLFKTASMARPIT
ERKAREEFSRRWCMLNDGNFSYYESDKNSTPNGTLKSTEIVCLAVNTPERHGYDHTFELY
SDSERIYLFGTDDPDSHREWVKSITKTFIPSNAEGLLRLAFERIGRLRYKDGLNLQSPRV
GWFALVGSSLHAYLEDSVEEEEIHLRKLQELSIQQENEVLVLVERGRTLYIEGERKLDFQ
GWCVSMQRAAGSAGDSLSQQQLTETDIPVIVDRCIDYITQCGLTSEGIYRKSGVNSRVAA
LCEAFRRDARSVRLKEGEHQVDDVSNTLKRFFRESGEGLFTIQAASAWLSTPVIPEESRK
ICQYQLLLSQLPRVNKATLRALVNHLYCVQRFAELNQMNLHNLAIVFGPTLFQSDGKDYT
AGLVIEELIEHYTDVFEVDELQLKRQLDEITAIIKVREKLNHNSSVPASGSAGDFICTVY
LEEKKETTEQHVKIPGSMTAAELTCEILDRRKIQVREKDYWSCWEVSQKEETERPLHHLE
RVLPIIHSLGTDSHLLVKKHLAMEAIRIYLASKVDVSKHGMVKFREGRSILGLGLNTGSF
HDRYFILSTASLRMYKEVRSNRPEREWQVKNLRVYLGIKKKLRPPTCWGLTVINGSEKQE
KPERQQWYLCCDTQTEMREWFSTFLTIQYDGNVWPADAVQTRVTRALPADTRHGNVALIP
LRGSENEMRNSVAAFTADPLGLFRDV
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggcggaggggtgtgtgtcggtgtgggagtggctgtgtgctctgcatctggac
cagtatttcccagtgttccaggacgcggggtttggaacgttgttggaatgccaagggctg
acccaggatcagctggagacgattggaatcaaactgcctgggcaccgcaaacgcatccta
gtcagcctgcaaaaaacacaccaccacacacaccccgagagagagcacgatgccctactc
acacatctggctgcagagggagaccagaaagaggaagagagagctgtgttcagacccagt
cctttggggagagagacaccactacctgcacagagaccagtatccagaggagagagacca
gtccctaaggagagatcagtgtacagggaagaagtgagggatggagagagaccgaggcca
atccccaaggagaggactaagtaccgctctgtgcctgtagagacattggactgcggccag
acttccccccatcccaaccctaccttctgccctaccacccccaatcccaactctacctcc
tactctaccgcccccattctactgcccaggaccccccttaccccccatccccctcgcagc
accccaaagggccccccactacgcttcatccccacctccctaaacactcccccatggcac
ccaaacccagacataaacataacaatacacactcctctacaaacacaccgaccacagtac
tcctccctagcctctccaccaatcccctcacagtactcctccctagcctctccaccaatc
ccctcacagtacccctccctagcctctccaccaatcccctcacagtaccccttcctagcc
tctccaccaatccccccacagtacttctccctagcctctccaccaatctccccacagtac
ccctcactagcctctccaccaattcccccacagtacctctccctatcctctccaccaatc
cccccacagtacccctccctagcctctctaccaaacccctcactgtacccctccctagcc
tctccaccaatccctgcaccgtacctctccctagcctctccaccaatccccccacagtac
ctctccctagcctctctccctcgcctgtttcaccagccagacacccccagcaggtggggg
agggagggagaaagctctctcctgtttcaccaaccagacacccccagcaggagggggagg
gagggagaaagccctctcctgtttcaccagccagacacccccagcagatgggggagggag
ggagaaagccctcccctgtttcgtcctcttcctcctcctcttccttctcagttgaccaat
atgaccagtcttcctcttctgatcaatgcgtgcccaccctcccccctaaagtctacgtgg
tgggggcgggccctaaagagcctcgcggccctgctccaatcccacgtcgacctcctgttt
tgccccccagaaccacacccacacatagggtcagattttggtgacagttcagatgactct
gaagatccagaccaagtttaccccaagccccagtctgtgaacatggcagacagggatgtg
ttcctgccggtgccggggtgggggaaggggcgatacagctctctctgcagcgacgatgaa
ctattggacgatgacaacgagccaatcagcaaccgtcagagctcatggcaggactatggt
ctgagtacgctacaggagagtgtctacctgccggtcacaggcagggtcctagcccagccc
cctagagatggcccctcccctgttctaaagatgggctggtggataaggctggataagaac
ccaccgcaggggtctctgtactaccagaggagatgggtgaagctggatgttgactacctg
agatactttgacaacgacaaggaggtatactctaagaggatcataccaacggctgccatt
acgggggtgaccaacgtgggggagcagaagtttgaggtggtcacaaccaaccggaccttt
ctcttcagagccgagagcgactttgagagaaatgagtgggtgtcagttctgcagaacttt
accaaggggggccaggggggcagcagggagattacttcatcggtcccacactcctcgatg
acccctggttcacccctgacccctgaacagcagggctacctggagctgaggggcctgcgc
tccaaactctacacagtcgtctccggagacaaggtcttcctctacaagaacatggaggac
taccgtcttggcatcggcatcacgtctatcgacatgaacgtaggaaacgtgaaagacact
gaccgtcgcagctttgatctgacaacaccctaccgcatcttcagttttctagcggattca
gaacaacataaagaccagtgggtagaagcgatgcgtgaagcgattggagaggctctgtcc
aatagcgaggtggctaatcaaatctgggcggagcctagcaatggttgctgtgccgactgt
ggcgccgccaaacctgagtgggctgccatcaacctgtgtgtggtggtctgcaaacgctgt
gcaggagagcaccgcggtttgggccccagcatctctaaggtgcgcagtctgaagatggac
aggagggtgtggacagaggagcttatacaggtgttcctgttgctaggtaatgagcgtctg
aacggattttgggcggcgaacgtccctcccagcgaggcgctgagtccgaccagttgtagc
gaagaccgccgccgattcgtcagctccaaatacagacagggaaaataccgcaaatatcac
cccctctacggcaaccaggaagagcttaacaacgatgtatccccgtccaggtctggtcgt
ggagctgagggtctggtcagtggagctgagggtctggtcgtggagctgagggtctggtca
gtggagctgaggaaggtgtttctctctgtccctcctcctctcttctgttgttgtattttt
gtgaggagggctcttgcatcgtcttcacttggaactatgcagtttggtacacacacacac
atacacagacacacacacacacacacatacacagacacatacacatacacatacacagac
acatacacatacacagacacacacacatacaccggtgacattcaagaggactacactgtc
agctcatgggccctgtgtattaacgtgcagtgcagtgatgtcctggagaccttatgtctg
gtgttctgtggagctgatgtgaactgctctactggccaggttgactgtccctcccctctc
tccctggcactcgcccacaaccagaaactacaggcccagttcctctcacacaacctcaac
acagagctgccccggtcggaggtgactggggtcatggagcctcaacactattcaccacag
caccccgtcacgcacaatggcttccttttcaagactgcctccatggcccggcctatcacg
gagcgtaaggccagggaggagttcagtcgtcgctggtgtatgttgaatgatgggaacttt
agttactatgagagtgacaagaactccacgcccaacggaaccctgaagtctacagagata
gtctgtctggctgtcaacacaccagagagacatggctatgaccatacatttgagctgtac
tcagactctgagcgtatctatctctttggcactgatgacccagacagccacagggagtgg
gttaaatccatcaccaagacgtttattccatccaatgcagagggcctattgaggctggct
tttgaaaggattggccggctgcggtataaagacgggctgaatctacagagtcctcgggtt
ggctggttcgctctggtcggctcctccctccatgcctacctagaggacagtgttgaagag
gaggagatacacctacgcaaactacaagagctctcgatccagcaggagaatgaggtgctg
gttctggtggagagaggcaggactctgtacatcgagggggagaggaagcttgacttccag
ggttggtgtgtgtccatgcagagagcagcaggcagtgcaggggactctcttagtcagcag
caactaactgagaccgacatccctgttatagtggaccgctgcattgactacatcacacag
tgtggtctgacgtccgagggtatctaccgtaagagcggtgtgaacagtcgcgtggcggcg
ctgtgcgaggcgtttcggcgtgatgcccgtagcgtgcgtctgaaggagggtgagcaccag
gtggacgacgtgtctaacacactgaaacgcttcttcagagagtctggagagggactgttc
accatacaggctgctagcgcatggctcagcacacctgtgatcccagaggagagcagaaag
atctgtcagtaccagcttctgctgagccagctgcccagagtcaacaaggccacgctacga
gccctggtcaaccacctctactgtgtgcagcggtttgcagagctgaaccagatgaatctc
cataacctggctatagtatttggcccaacactgttccagagtgatgggaaggactacaca
gctggcctcgtcatagaggaactcatagagcactacacggacgtctttgaggtggatgag
ctgcagctgaaaagacagctggatgagatcacggccatcattaaagtcagagagaagttg
aaccacaactccagcgtccctgcgtcggggtcagcaggtgacttcatctgtacagtgtac
ctggaggagaagaaggagacgacagagcagcatgtcaagatccctggttctatgacggca
gcagagctgacctgtgagattctggaccggcggaagatccaggtcagagagaaagactac
tggagctgctgggaggtcagccagaaggaggagactgagcgtccattgcatcacctggag
cgtgtgttacccatcatccattctctgggtactgactcccacttgctggtcaaaaaacat
ctcgccatggaggccatacgcatctacttggccagtaaagtggatgtgtccaagcacggg
atggtgaagttccgggaggggaggagcattctgggattgggactgaataccggcagcttc
cacgaccgctacttcatcctgagcactgcctccctcaggatgtacaaggaagtgcggagt
aatcgtccagagagggaatggcaggtgaagaacctgagggtctatctaggcatcaagaag
aaactacgaccacccacctgttggggtctgactgtgatcaatggaagtgaaaaacaggag
aagccagagaggcagcaatggtatctgtgttgtgacactcagacagagatgagggagtgg
ttctccaccttcctcactatccagtatgatggtaacgtgtggccagcggatgcagtacaa
acacgtgtgacccgtgcgttgccggcggatacgcgtcatggtaatgtggcgttgattccg
ttgcgcggcagcgagaatgagatgcggaacagcgttgcagctttcaccgccgacccgctt
ggcctctttagagatgtctga
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integrated database retrieval system
