Oncorhynchus gorbuscha (pink salmon): 124005036
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Entry
124005036 CDS
T07892
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124005036
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124005036
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_2nd
DUF1233
Motif
Other DBs
NCBI-GeneID:
124005036
NCBI-ProteinID:
XP_046169844
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All DBs
Position
LG19:complement(37981809..38045455)
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AA seq
523 aa
AA seq
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MMAGGAVQQNGVFLNPHHHNQQPHMESDPPDSRKRPLETPTEASSTKRTNTGVAFLQPLF
ETEGIVFPHQESHSEAHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS
KDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSTQKSEPVSVMQPQTTVNPDRIK
QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRK
AVEIIVQKIQEDPQSSSCLNISYSNISGPVANSNPTGSPYANSAEVNPAAAAAAAATASS
LLGQATMQSMGGFPTTMGPSFSGNDLLTITSALNTLASYGYNTNSLGLGLNPAAASGVLA
AVAASANPAAAAAANLLASYASDASTSAGHQAASLGGFTLGSLAAATGATNGYLSASSPL
MAQSLMATEKQMQEGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFI
PGTRNRKVTITGSPASTQAAQYLISQRITYEQGVRATNPQKVG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggcggggcagtacagcaaaacggggttttcttgaatcctcaccatcacaat
caacagccgcacatggagtcagatccccctgattcgcgtaaaaggccactggagacccca
accgaggctagcagcactaaacgcacaaacacgggagtggccttcctgcagccccttttt
gaaactgaaggcattgtattccctcaccaggaatcacactctgaggcacatgaggaaggt
gagtacttcctgaaggtgctgatccccagctatgcggccggctccatcattggcaaggga
ggacagaccatcgtccagctgcagaaagagaccggcgccaccatcaaactgtccaaatcc
aaggacttctaccctggcacgacagagcgggtgtgtctgatccaggggacagtggaggct
ctgaatggagtccataacttcatcgctgagaaggtgcgggagatgccacaaagcacccag
aaatccgaaccggtcagcgtaatgcagccacagaccaccgtcaaccctgaccgcatcaaa
caggccaagctgatagtaccaaacagcacagcaggtctgatcattggtaaaggtggagcc
acagtcaaggccgtcatggagcagtcaggcgcctgggtgcagctctcccaaaaaccagag
ggcatcaacctgcaggagcgcgtggtcaccattagcggagagcccgagcagaaccgtaaa
gccgtggagatcattgttcagaagatccaggaggacccccagagcagcagctgcctcaac
atcagctactccaacatctctggccctgtggccaactccaaccccaccggctccccctac
gccaactcagccgaggtgaaccccgctgctgctgctgccgccgctgccacagcctccagc
ctcctgggtcaggccaccatgcagagtatgggcggcttccccaccaccatgggtcccagc
ttctcaggcaacgacctcctgaccatcacctcggccctcaacacgttagccagctacggc
tacaacaccaactccctgggcctggggctcaaccccgcggcagcctcaggagtcctggca
gccgtagcggctagcgctaaccccgccgcggctgccgctgcaaacctcctggcatcctac
gccagcgatgcctccaccagcgcaggccaccaggccgcctccctgggaggcttcaccctg
ggctcgctggccgcggccactggggccaccaacggctacctgagcgcctcatccccgctg
atggcacaatccctgatggccactgagaagcagatgcaggagggggccaaggacgtggtg
gagatcgctgttcccgaaaacctggtaggggccatcttggggaaaggagggaaaacgcta
gtggagtaccaggagctgactggagcccggatccagatctccaaaaagggagagttcatt
cccggcacccggaaccgtaaagttaccataaccggctctccggcgtcaacgcaggcggct
cagtatctgatcagccaacggatcacgtatgagcagggtgtgcgcgccaccaacccacag
aaggtgggctag
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