Oncorhynchus gorbuscha (pink salmon): 124005061
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Entry
124005061 CDS
T07892
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124005061
Membrane trafficking [BR:
ogo04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124005061
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
ARM_UBP24_USP9X-Y
SPA
Motif
Other DBs
NCBI-GeneID:
124005061
NCBI-ProteinID:
XP_046169916
LinkDB
All DBs
Position
LG19:complement(17593126..17627871)
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AA seq
1497 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLSPGGSAPLDEEGQQRGGRVVEPVIDLAVIARGLGEEVPEGFT
CIEKTQGGHPAGLSAGLINNPHMYLCYRRGHDKPPILDLGVLYEGKEVVKQGWNVIETTP
YSRSASLSSGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAPHTFCRVEKNL
NTGIWGPALYLCYKRAVAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYEAFPRECLSERQSVRLGLVSVVDRRPI
TNRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKQGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTHQKFYTQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKQSDVEKPEEVRL
IDLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYETFPVLCMDLFDRPQDQLRVPTKGS
APSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRA
LQTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYA
YYNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPIKQLLKSGSVRSRTDTMDSNQR
SRPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMRGSTDKSKLSMKAVLGNPGANG
CSNPASRKPPVGPRDTTTPSPFPPGGVLVRRDQVCLSTFYKDCAETAVSDPDCSCQPEDR
DGRPPGPRDTVSRKAVDENYNNVSPPSRGSLAGKLQQLLTPTRHRVSGRRAASVDARRSG
GENGPVRRVSEQRLSRKAQVAESLLKAKERLYTATSESSLSVGSDVDLPETTNLAFPLRK
SWDTNQEGAGLEVSMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLN
AEICDLGPISSLERTNWNMDEEVESAAKSTGDQEAILGHNGVSEDSSSETSSYSESSSAT
MGSSVGGSPQVTVAYLSPLVLRKELESLLENEGEAVLSQGQLLDSHSIIFWNMVWYFHRL
GLPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDYWPPLYILWRIHSGVPMR
NHSWRRHNHPFTLAFLEEVLRWVGMNEVHKGITLFLETIAKQPGTPKIQRSLYREMLFLT
LAAMGRDHVAAFDKKYKAAYQRLSGSLGREELRRKRAQPPSPKAVDCRRSFLLPLEC
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgcccccagctagtggactactttgtggtggcagggctgtctccg
gggggctcggccccactggacgaagagggccagcagagagggggccgggtggtggagccg
gtcatagacctggcggtgatcgcccggggcttgggggaggaggtgcccgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgggctgagcgccgggctcatcaacaac
ccccacatgtacctgtgttaccgccgtgggcatgacaagccacccatcctcgaccttggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggaatgtgatcgagaccaccccc
tacagccgctcagccagcctgagctccggggggcctgccacccaccgcaccttcctgacc
taccgccgggccccagagtcccaggccctccacaccctgggggtcacagacatctccctc
ctgctgcccagcaagggggaggtggccccccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagccttatacctgtgctacaagagagctgtagccaaagcc
aacgccctagtctatgaagcaggtctgatcagtcggtatcctgaagcggacgtggagtcg
ttccccctgccagagtctgtgcctatgttctgtctgcccatgggtgtgacggtggagagc
tggcccctcaacaccaagtaccagctccctgtcttctctaccttcgtcctcaccagcgcc
tgtggcgacaaggtttacggtgctgccatccagttctacgaggcgttcccacgggagtgc
ctctcggagcggcagagcgtccgtctgggcctggtgagtgtggtggaccggcggcctatc
accaaccgcaccctgcaagtgaagaagagcgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcaccttcgtctaccgatactccatctccggaccccacgtg
ctgccacttgagaagcacatctccagcttcatgcacaacgtcccgttcccctcccctcag
cgacctcgcatcctagtgcagctctccccctatgataaccttctcctctgtcagcctgtc
tcctcccccttactactcagtggtgccagctttgtgaagctgctgcagaacctgggccct
gagaacgcctgtgtcctgctgctggctgtgctgacggagcacaaactactgctacactcc
ctccgccccgacgttctcacctccgtcagcgaggccctggtatctatgacgttccctctg
cgttggcactgcccgtacatccccctgtgcccgctgcggctggcagacgtactgtgtgcc
ccaatgcccttcattgtgggcgtccactccagctactttgacctctatgacccccctact
gacgtggtgtgtgttgacctggacaccaacaccatctttcaagcagaggacaagaagccg
ttgtcatggcgatcactaccaaggaagcaaggcaagatgctggtgaataccctcaccaac
ttgatgaagacactggagaaaatctacaccactggccaagaggaggccaccctggagttc
ctgctgacggactatgacctgatctacgggcgtcagaagcagctggagctggagatccag
gaggccttcctgcgtttcatgagctgcctgctcaggggctaccgtgcctacctgctgccc
atcacccaggccccctcagacaggaccaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtctcgtgaacgcacccaccagaagttctacacccagctgaccaggacccag
atgttcactcagttcatcgaggagtgctccttcgtcagtgaccgccacgcctgtctggag
ttcttcgacgagtgtgtccagaagcagtcggatgtggagaagcctgaggaggtgcgtctg
atagacctggacgaggcccacagtggggagcacacggtcttcatcatgcccccagaggaa
ccccaggagccagacggttcagagtgccccactcactacagctatgagacattccctgtg
ctctgcatggatttgtttgaccggcctcaggaccagctacgtgtccctaccaaggggagt
gcccccagcagccctgccccgcgacggactaaacaggagattaagctggcacagaagcgg
gcacagatatactcggcagtgcccgacatgtggtccaaatgcctgctgggccactgctat
gggctgtggttcatatacctgcccacctttgtgcgggcggagagtgccaaggtgcgtgcg
ttgcaaacggcatacgaggtgctcaagcacatggagaccaggaaggtggtactaccagat
gaggtgtgttacaggatcctgatgcagctgtgtggacagtacgggcagccagtgctcgct
gttagggtacttctggagatgaagaaagctgggatcacacccaacaccatcacctatgca
tactacaacaaggcagtgctggagagcaagtggccctccaccaatcagggtggccgtctg
cgctgggccaagttgcgcaacgttctgatggccgtggcgcagttcagacagccaatcaaa
caactgctgaagagtggttcagtacgctcacggacagatacaatggacagtaaccaacgg
tcccgcccacaatctaacctgattcgtcagtccagctggagcggcctgagtgaaagctcc
agccacgaatcgctgacggggtctatggtgaagagcaacagcctgaacagcatgagaggc
tcaacagacaaatctaagctctcaatgaaagcggtgctcgggaacccaggtgccaatggc
tgcagcaatcctgcctcccgtaaaccccccgtggggccacgagacaccaccaccccttct
ccctttccccctggtggtgtcctggtgcgccgcgaccaggtgtgcctgtccaccttctac
aaagactgtgccgagacggccgtctctgaccccgactgcagctgccagcctgaggacaga
gacggcaggccacctgggccgagagacaccgtgagccgcaaggccgtggatgagaactac
aataatgtgtcacctccgagtcggggaagcctggcagggaaactacagcagctgctcaca
cctactcgccatcgagtctcggggcggcgggccgcaagtgtagacgctcggcgctcgggg
ggtgaaaacgggccggtgcgcagggtgtcggaacagaggctgtcccgaaaagcccaggtg
gctgagagcctgctgaaggctaaggagaggctctacactgctacctctgagagttctctg
tcggtggggagtgacgtcgaccttcctgaaaccaccaatttggcctttcctctccgcaag
tcctgggacaccaaccaagagggagcaggattagaggtgtcgatgtcgagctgctccctg
tgtcggagctgtaactccctggtctatgatgaggagataatggccgggtggacgtctgac
gactccaacctcaactccagctgtcccttctgctcgaccaccttcgtcccccttctcaac
gctgagatctgtgacctaggacccatcagcagcctggaacgtaccaattggaacatggac
gaggaggtggaaagcgcagccaagtccactggtgaccaggaggccatcctgggtcacaac
ggtgtgagtgaggactccagctctgagaccagcagttattctgagagcagcagcgctacc
atgggatcatcggtgggcgggtcgccccaggtgacggtggcctacctgagcccattggtg
ctgcgcaaggagcttgagagcctgctggagaacgagggtgaggcggtgctgtcgcagggc
cagctcctggacagccactccatcatcttctggaacatggtttggtacttccatcgcctg
ggcctgcccagcaatctgctacagctggttcgctcctcaccgctggccaaccaactagca
cagacttcagagaactcagcagtgagggtgaggctgctgtgggacacactgacccctgac
acagactactggccccccctctacatcctgtggaggatacacagtggcgtacccatgcgg
aaccacagctggcggaggcacaaccaccccttcaccctggccttcctggaggaagtgctg
cgctgggtcggcatgaacgaggtacacaagggaatcactctcttcctggaaaccattgcc
aagcaaccaggcacgcccaagatacaaaggagtctgtacagagagatgctcttcctcacg
ctggctgccatgggtagagatcacgttgctgcgtttgataagaaatacaaggctgcgtac
caacggctgagtggctccttgggccgcgaggagctccgcaggaagcgagcccagccacct
agccccaaggctgtggactgcagacggagcttccttctgcccctcgagtgttaa
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