Oncorhynchus gorbuscha (pink salmon): 124005137
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Entry
124005137 CDS
T07892
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein-like isoform X1
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124005137
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124005137
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
WD40_CDC20-Fz
Patched
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
124005137
NCBI-ProteinID:
XP_046170070
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Position
LG19:19254361..19287844
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AA seq
1305 aa
AA seq
DB search
MAMDCIGSSDAFKLGILGSIVRRSLDAPRRSVLAHPRTAPPDGRQLTPPPRMTVRERLRE
KISAAFYRHGLLCASYPVPIILFTSASILACCYPLLRLPLPGTGPVEFATRVRDYTVPSH
EPQGDLGERPDWYRGPPVAYIQPVLVKAAVSPWDSTLVPVDVFRSPLGRVFSLLEEIRNH
VHDDGSGVRSLEALCLQVTDLLPGLRRMQRVLPEHGCLLVSPGNYWQNQRELFDSDPDLL
KTVHQHEPKGLHTSPTLRDLLFGVPVKHTGVSLYSRKRVVTYTITMVLGSYDTRFLSSLR
ARLRQLHPSVNCSLRADHMVHVHFKEEIGMAELIPLVTTYIILFAYIYFSTRKIDMVKSK
WGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTP
VDLEVKLRIAQGLSNESWSIMKNMATELCIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQ
MFFFTTVLSIDIRRMELADLNRRLPAEAGMPLPKPGPLRPREAPPPPRPSPHTITLQTPA
FRNLRLPKRLRVVYFLARTRLAQRFIMVGTVIWIGILAYTDPAGLRTYLAAQVSEQSPLG
QGGAGGLPPHLGVASVFPGPGGDPADTLSVLPAPAEPTPLPENQSQGHHGAPGEGVPLVP
QISWGAEDEEGWRRLSFRHWPSLFSYYNITLAKRYISILPVIPITLHLSPREAIETRHPQ
DTRHPPPPSLKTNDLPADLTLYKVAALGLAAGVLLVLLLFCLYRVLCSRNYGQNGVAHGR
RRRGDLPCDDYGYSPPISEISPLLLCGHSMDIECLASDGMLLASCCLAGQIRVWDTQTGD
CLTVIPKHGLRRSSSSGCWEQRDGWDAVGVAEPENLGGGTEPGGGFFDEDEGYPLRRRTT
PRPALFENQPDLTPLIDTNFDSQAPSHLLLTPPRDGFDFGGLVEKAYLEHEPPSPGLTAS
YPSPLSGPPPQRIRSLGYIHSPAPQGQETPDWESAVWAMELRGNLIAAGRSNGKLELWDA
VEGSLRCSNEDGVSGITALAFLNNRIVAARLDGSLDFFTVDINKPLGLLQYRGPPGRSNM
PPSPCYSSEDVISCQLTRSVQCAHQKPITVLRAAAGRVVTGSQDHTVRVYRLEDSCCLFT
LQGHSGGITAIYIDQTMVLASGGQDGAICLWDVLTGSRVSHVYGHRGDVTSLVCTTSCVI
SSGLDDLICIWDRSTGIKLYSIQQEVGCGASLGVISESLLVTGGQGCVSFWDLNFGDLLQ
TVYLGQSSDGQGVRQLVVLNNAAIVCDFGSELSLVYVPAVLEKLD
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggactgtataggatccagtgatgccttcaaactggggattttaggaagcatc
gttaggaggtccctggatgccccgcggcgctcggtcctcgcccacccgcgcacggcgccc
cccgatggccggcagctgaccccgccccccaggatgacggtgagagagcggctgcgggag
aagatctcggcggcgttctaccgccacgggctgctgtgcgcatcctatccggtgcccatc
atcctcttcacctccgccagtatcctcgcctgctgttaccccctgctgcggctgcctctg
ccgggaaccgggccggtggaattcgccacacgggtccgagattacaccgtcccttcccat
gagccccagggagacctcggcgagaggcctgactggtatcggggtcctccggtggcctac
atccagccggttctggtgaaggcagctgtgtctccctgggacagtacgctggtccctgtg
gacgtgttccgctccccactgggccgcgtattcagcctgctggaggagatccgcaaccat
gtacacgacgacggttctggggtcaggagcttggaggcgctctgcctgcaggtgacggac
ctgttgccggggttacggcgtatgcagagagtgctgccggagcacggttgtctgctggtc
tcccccggcaactactggcagaaccagcgggagctgtttgactctgaccccgacctgctg
aagaccgtccaccagcacgaacccaaaggactgcacacctcccccacactgagagacctg
ctgtttggcgtcccggtgaaacacacaggggtgagtctgtacagcaggaagagggtggtc
acctacaccatcaccatggtcctgggcagctacgacaccaggttcctgtctagcctgcgg
gcgcgtctccgccagctacacccctcggtgaactgcagcctacgcgcggaccacatggtg
catgtgcacttcaaggaggagataggcatggccgagctcatccctctggtcaccacctac
atcatactgtttgcctacatctacttctccacacgtaagattgacatggtgaagtcaaaa
tggggcttggcgctggctgccgtggtaacagtgctcagctctctgcttatgtctgtgggg
ctctgcaccctgttcggcctgacgcccacactcaatggaggtgagatcttcccctatctg
gtggtggtgatagggctggagaacgtcctggttctcaccaagtctgtggtgtccacccct
gttgacctggaggtcaaactacgcatcgctcagggccttagtaatgagagctggtctatc
atgaagaacatggccacagagctgtgcatcatcctcataggatatttcaccctggtgcct
gctatccaggagttctgtctgtttgctgtggtggggctggtgtctgacttcttccttcag
atgtttttcttcaccacagttctttccattgacatccgacgcatggagttggccgatctg
aaccgccgtcttccggccgaggcggggatgccccttcccaaaccgggccccctgcgccct
cgggaggcgcctcctcccccacggccctcgccccacaccatcaccctgcagacgcccgcc
ttcaggaacctgcgcctgcccaagaggctccgtgtggtctacttcctggcccgcacgcgt
ctggcccagcgcttcatcatggtgggtacagtgatctggattggcatcctggcctacacg
gaccccgctggcctccgtacctacctggcagcccaggtgtctgagcagagccccctgggg
cagggcggggccgggggtctgcccccccacctgggagtagcctcggtcttccctggacca
ggaggggaccccgccgacaccctcagtgtcctccccgcccccgctgaacccaccccgctt
ccagagaaccagtcccagggccaccacggggcccccggggaaggagtacccctggtgccc
cagattagctggggggcggaggatgaggagggctggaggaggctgtctttcagacactgg
ccctcgctcttcagctactataatattactctggccaagagatacatcagcatcctgcct
gtcatccccatcacgctccacctgagcccccgggaggccatcgagacacgtcacccccag
gacacacgccaccccccgccgcccagcctcaaaactaatgacctgcccgcagacctcacg
ctctacaaggtagcagctctgggcctggcggcaggggttctgctggtgctgctgctcttc
tgtctctaccgggtcctctgttcccgcaactacggccagaacggcgtggcccacggacgc
cgtcgtcgcggtgacctgccctgcgacgactacggctactcgccacccatcagcgagatc
tcccccctgctgctgtgtggacacagcatggatatagagtgtctggcgagtgacggcatg
ctgctggccagttgttgtctggcaggacagatccgtgtgtgggacactcagactggagac
tgcctcaccgtcattcctaaacatgggctgcggcggagtagcagcagtggctgctgggag
cagcgggatggttgggacgctgtgggtgtggccgaacctgaaaatctggggggcgggaca
gaaccagggggcgggtttttcgacgaggacgagggctaccctctcaggcggcggaccacc
ccacgtcctgccctctttgagaaccaacccgacctcacccccctcatcgacaccaacttc
gactcccaggccccctcccacctcctcctcaccccgcccagggatggctttgacttcggg
gggctggtggagaaggcctacctggagcacgagcctccctcgccgggcctcactgcctcc
tacccctcacccctgtcgggaccccctccccagaggatacgcagcctggggtacatccat
tcccctgctccacagggccaggaaaccccggactgggaaagcgccgtgtgggccatggag
ctccgggggaacctcatcgctgctggaaggagcaacggcaaactagagctgtgggatgca
gtggagggctcgttacgctgcagtaatgaagacggcgtctcggggatcacggccctggcc
ttcctcaacaacaggatcgtggcggccagactcgacggctctctagacttcttcactgtc
gacatcaacaagcctctgggtttactgcagtacagaggtccccccgggcgtagtaacatg
ccgccctcgccctgctacagcagtgaggatgtgatctcatgccagctgacgcgctcggtg
cagtgtgcccaccagaaacccatcacggtgctgcgagccgctgccggcagagtggtcacg
ggcagccaggaccacactgtcagggtgtatcgtctggaggactcatgctgtctcttcacg
ctccagggccactctggtggaatcactgccatctacatagaccagaccatggttctggcc
agtggggggcaggacggagcaatctgtctgtgggatgtgctgacgggcagccgggtgagc
cacgtgtacggtcaccgcggcgacgtgacctcactggtctgcaccacatcgtgcgtgatc
agcagcggcctcgacgacctcatctgcatctgggaccgcagcacgggcatcaagctctac
tccatacagcaggaggtgggctgcggtgccagtctgggggtgatctctgagtctctcctg
gtgacagggggccagggctgtgtgtccttctgggacctgaacttcggggacctcctccag
acggtctacctgggccagagcagcgacggccagggggtccgccagctcgtggtgctgaac
aatgccgccatcgtctgcgactttggctccgagctcagcctggtctacgtacccgcggtg
ctggagaagctggactga
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