Oncorhynchus gorbuscha (pink salmon): 124005138
Help
Entry
124005138 CDS
T07892
Name
(RefSeq) GA-binding protein subunit beta-1-like isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124005138
03029 Mitochondrial biogenesis [BR:
ogo03029
]
124005138
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
124005138
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
124005138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Ank_KRIT1
ANK_LRRK2
GyrB_insert
Herpes_UL36
TFIIA
EBNA2_Core
GrpE
LMBR1
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
124005138
NCBI-ProteinID:
XP_046170072
LinkDB
All DBs
Position
LG19:19309924..19315507
Genome browser
AA seq
478 aa
AA seq
DB search
MSLVDLGKRLLEAARAGLDDDVRTLMVNGAPFTTDWLGTSPLHLAAQYGHHSTAEVLLRA
GVSRDARTKVDRTPLHMAATEGHSNIVELLVSSGADINAKDMLKMTALHWAAQHGHREVA
ELLLKYGADVHSLSKFDKTPFDIAMDTSNTELMILLQDGMQNQVNMNPEPQFIISSAGVV
NLSDLVNTTAKSGMGNWSTGYRESVSTTSVLATLAALAEASGPMGKNAGKSEDAIAADSV
DSAIQHVVGDGGQRVITIVTDQHGNLQPAGLGQQFFVTMQGQQMVAVPAGQITEEVVEQE
PYPSPARKRRIEPAAILTRPKDKKAKSVDSSREQLQKQLQEANRKAQEYRTQLLQKEQEA
EQYRLRLEEAIEQQQSNNTSNATGSTCTGVQEAEEEVVQMEKQHETEERVVEEDKVEGEE
DVPFPEDTILVKVEEELDSGEGEQITVDDTEETEKASTKVTTTPKRGRGRGRGRGRRR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggtggacctggggaagcggctgctggaggctgcacgggcagggctggatgat
gatgtcaggaccctcatggtcaatggagctcccttcaccactgattggctggggacatcc
ccgctccatctagcggctcagtacggacaccactccacggctgaggtgcttctccgagca
ggcgttagcagggatgcccggaccaaagtggacaggaccccactccacatggcggccaca
gagggccactctaatatagtggagctgctagtcagtagcggagcggacatcaacgctaag
gacatgctgaagatgacagccctgcactgggcggcccagcacggtcacagagaggtggca
gagctgctgctcaaatatggagcagatgtccactccctcagcaagtttgacaagacaccc
tttgacatcgccatggataccagcaacactgagctcatgatactgttacaggatggcatg
cagaaccaagtgaacatgaaccccgagccccagttcatcatctcctctgctggggtcgtg
aacctctctgacctcgtcaacaccaccgccaagtcaggtatgggcaactggagcacaggt
tacagagaatctgtctctaccacctcagtcctggcaacactggcagccctggcagaagcc
tcaggtcccatgggtaaaaatgcaggcaaatctgaggatgcaatcgctgcagattctgtg
gattcggccattcagcatgtagtgggcgatggaggtcagagggtcatcaccatagtgacg
gaccaacacggcaacttgcagccagcgggacttgggcagcagttctttgtcactatgcag
gggcagcaaatggtggcagtcccggctggtcagatcacagaggaggtggtggaacaggag
ccttatccctctcctgcacgcaagaggagaatagagcctgcagccatcctaaccagaccc
aaagacaagaaagcgaagtcggtggacagcagtcgggagcagctccagaagcagttgcag
gaggccaaccggaaggcccaggagtaccgcacacagctcctacagaaggagcaggaggct
gagcagtaccgcctccgactagaggaagccatagagcaacaacagagcaacaataccagc
aatgctactggttctacctgcacaggtgtccaggaggcagaagaggaggtggtccaaatg
gaaaaacaacacgagaccgaggagagagttgtggaggaggacaaagtggaaggggaggag
gacgtcccatttcctgaagacaccattctggttaaagtggaggaggagctggattcaggg
gagggagaacagataacagtggatgatacagaggaaacggagaaggcttcaactaaggtc
acaacgacccccaaacgggggagagggaggggacgaggacgtggaaggaggcggtag
DBGET
integrated database retrieval system
