Oncorhynchus gorbuscha (pink salmon): 124005162
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Entry
124005162 CDS
T07892
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124005162
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
124005162
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
124005162
NCBI-ProteinID:
XP_046170106
LinkDB
All DBs
Position
LG19:37668887..37718930
Genome browser
AA seq
1903 aa
AA seq
DB search
MLQLRPRLRLLPLLYLCFVFFPLPASNQTAGHRGGTAAGAGRRGAERIKVLFTPTICKVR
CTQGRCTNFCEQGNVTTLYNSEQGGRAALGPGFRVFLCPMLCQNGGVCIQKDRCLCPPTF
TGKFCHIPVATPSTNDIEKPLRIPSVLASQQLLTQSEYILPLQSQQQSHSQPSGASGSSM
VKVRVQHPPEASVKIHQVLKVGYGPGTVREQSETVTWSAGLSGARTSVLPGERAEAPPPK
PRVQAQTLHGDSTYTESSGFKYCFREVRNGQCSSPLPGLRSQDTCCRGIGLAWGINECVL
CPPNTGNGVDGSCPAGFERINGTQCVDVNECLQPGFCENGNCVNTRGSYSCVCRQGYILD
ASHGICISRKVISEDKGQCYRILNSGSGRGSCSVPILRNITKQICCCSRVGKAWGKNCER
CPYFGSVAFKEICPAGPGYHYSASAIKFNQRVVEQHGTGGPPVISQSIPQTRPQQPASSG
AQTPLTSPQQPSSSGFFTPQTRPQQPDGRALIPQTRPQQPSSGGSLSPQGRPHIPAISVT
AGPTRVVTARTPTQTKRPPVDQRPISPVRPAQPLPSPVTPRPPIPRPVRGVCETMPQVCG
QGRCVDQPGGRHTCICNEGYQHNAQQTHCQDIDECRASPPPCGSGRCQNTEGGYRCSCPS
GYQPGPRGTSCIDVNECIQAPSPCSVGECENTPGRYRCVCPAGFRANIQQTQCQDIDECR
QVPNPCNNGRCENSPGSFKCVCRTGYKLEGNTCKDVDECEDPLKCPGQACVNSPGSYKCV
SCPPGFGLLNEQCRDVDECRQTPSLCTNGRCENTPGSYRCVCHTGYKLQGKACTDVDECE
DPLRCPGQACVNSQGSYNCVSCKPGFSMINGQCSDIDECRQSPGPCTNGHCENTQGSYSC
ACLTGYRLHGDTCTDADECADPSQCPGQECVNSQGSYKCVSCKPGFGLVDRRCTDVDECL
HSPSRCANGRCENTAGSYKCACRSGFRLQGNTCTDVNECENALQCPGQECVNSEGSFICV
ACSPGFVAGNGQCTDIDECRQTSNLCANGLCENTLGSYRCICRTGFKLQGSVCVDVDECA
DSSQCPGQRCVNSEGSYKCIACKAGHRMQDGLCADVDECQSPDTCGAARLCVNTDGSYRC
DCQPGYRTTGLGRQCRDVNECLEGEYCFPRGECVNTEGSYLCVCSQGYTTSSDGSSCLDV
DECARSGPGVCQDGRCVNTEGSYQCQCQVGFTTNPEKTACLDVDECSEGAVCQTQRCENT
IGSYRCITSCEPGYRVTRTGECVDVNECANETVCGEHAFCQNLIGTYQCMCDQGYTATSD
GKGCVDENECETMQGVCGAARCENVDGSFMCECPGEGEEFDTRSGQCLSTPRPGLPVFSG
GSSSSSSTTGLGPQRRPDTSQLPPARPGELRECYYNTEEQSSCSVLARNTTQQECCCTVG
QGWGMGCQFDPCPQLGTAEHQALCPSGRGYVTGPGAFSYKDVDECKLFHPEVCKSGVCVN
NIPGYSCYCTSGYYYDNVFLECIDVDECEAGEDSCPGGICVNTLGSHFCTCVPPLVLDDT
QRSCVNSTDLAVDEKLSFCWQYVTPDLVCQSPLLGGQVTFSECCCLYGEGWGLQCALCPA
RDSEDYEARCNVFLRPPEFPPPFPDRYGPDPGPGRGGGGGGYRVPYGPDSFPDPIPRRPE
YPRPDYDDYTPPGGSRSGFRGRTPSTFRVPESPYRQPSGYIPERYYDEDDYGPPDAPPRP
PFRTLPDPRSELSFGARPPIPEGLPLSLAPLPDSDPYSEEEEEGPEPWRVGPPFPDRRGP
GGGPRRVYERQYEPYAGLSTEDCGILHGCENGRCIRVAEGYTCDCYEGYELDMTSMACID
INECEDPDNVCASGRCINTDGSYRCVCHRGYVMSRRHNHCVAA
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgctccagctcagacccagactcaggctcctaccgctgctctacctctgcttcgtcttc
ttcccccttccagccagcaaccagaccgccggccaccgaggaggaacggcagcaggggca
ggaaggagaggagctgagcgcatcaaggtgctcttcaccccgaccatctgcaaggtgcgc
tgcacccagggacgctgcaccaacttctgcgagcagggcaatgtgaccaccctctacaac
agtgaacaggggggccgggctgcgctgggaccgggcttcagagtcttcctgtgccccatg
ttgtgtcaaaacggaggggtctgcatccagaaggatcgctgcctctgcccgccaaccttc
accggcaagttctgccacatccccgtggccacgccctccaccaatgacattgagaagcct
ctgcgcatcccctcagtgctggccagtcagcagctgctgacccagtcggaatacattctc
cccctgcagagccagcagcagagccacagtcagcccagtggtgcgtctggctcatccatg
gtcaaggtgcgggtgcagcaccccccagaggccagcgtgaagatccaccaggtgctgaag
gtggggtatgggccaggcacagttagggagcagtcggagacggtcacctggtcagcaggc
ctctcgggggccaggaccagtgttctgccaggggaacgggccgaagccccaccacccaaa
cccagagtccaggcccagacactccacggtgactccacctacacagaatcctccggattc
aagtactgcttcagggaggtccgcaacggccagtgcagctcacctctcccaggactcagg
agtcaggacacctgctgccgagggattggactggcctggggcatcaacgagtgtgtccta
tgtcctcctaacacaggaaatggagtcgatgggagctgtccggctggatttgagaggatc
aacggcacccagtgtgttgatgttaatgagtgtttgcagccaggcttctgtgagaacggc
aactgtgtgaacactcgggggagctacagttgtgtctgcaggcaaggatacatactggac
gcctctcacgggatctgtatctcccgtaaggtgatctcggaggataagggccagtgctat
cgtatcctaaactctggctctggccgtggtagctgctccgtgcccatcctcaggaacatc
accaagcagatctgctgctgcagccgcgtgggcaaggcctggggcaagaactgtgagagg
tgtccctactttggatcagttgctttcaaggagatctgcccagcagggcctggctaccac
tactctgcctctgccatcaagttcaaccagagggtggtggagcagcacgggactggaggt
ccccctgtcatatcccagagcatcccacagaccaggccacaacaaccagccagtagtggt
gcacagactccactaactagtccccaacaaccttcaagctcaggctttttcactccccaa
actagaccccaacagccagatggtagagctctcatacctcagaccaggccccagcagcca
tcgagtggaggctccctgtccccccagggcagaccacacatcccagccatctctgttaca
gcaggacccacccgggtggtgacagctcgaacccccactcagaccaaacggcctccagtt
gaccaacggccaatatctccagtgagacccgcacagcccctcccatctccggtcacgccc
cgcccacccatccccaggccagtgcggggtgtgtgtgagaccatgccccaggtgtgtgga
cagggccgctgtgtggaccagcccggagggagacatacctgcatctgtaacgagggatac
caacacaacgctcagcagactcattgtcaagacatagacgagtgcagggcgtctcccccg
ccttgcggcagcggccgctgccagaacacagaagggggctacaggtgcagctgcccctct
ggataccagccgggaccccggggcaccagctgtatagatgtcaatgagtgcatccaggct
cccagtccctgttctgttggggagtgtgagaatacaccaggccgctacagatgtgtgtgt
cctgctggcttcagagccaacatccaacagacgcagtgtcaagatattgacgagtgtcgt
caggttccgaacccctgtaacaacggccgctgtgagaatagccctggtagcttcaagtgt
gtctgccgcactgggtacaagctagagggcaacacgtgtaaagatgtggatgagtgtgag
gaccccttgaagtgtcctggtcaggcctgtgtcaactctccaggatcatacaagtgtgtg
tcttgcccaccagggtttgggctgctcaacgaacaatgccgagatgttgacgagtgtcgt
cagacccccagcctttgcaccaatggtcgttgtgagaacactcccgggagctacaggtgt
gtttgccatacgggatacaaactacaaggcaaggcctgcacagatgtggatgagtgtgag
gaccctttgaggtgtcctggtcaggcctgtgtcaactctcagggttcttacaactgtgtg
tcttgcaagccaggcttcagcatgatcaatggacaatgttcagatatagatgagtgtcgt
caatcccccggcccatgcaccaatggtcactgcgagaacacccagggtagctacagctgt
gcgtgtctcactggctacagactacacggtgatacctgtacagacgcggatgaatgtgca
gacccgtcccagtgccctggccaggagtgtgtcaactcccagggctcatacaagtgtgtg
tcctgcaagccaggctttgggctggtcgacagacgctgcacagatgttgacgagtgcctc
cacagcccatctcgctgtgctaacggtcgttgtgagaacacggctggaagctacaagtgt
gcgtgccgatctggcttcaggttacagggcaacacctgcacagatgtcaatgaatgtgag
aacgctctacagtgtcccggtcaggagtgtgtcaactctgagggctccttcatatgtgtg
gcctgtagcccaggctttgtggctggaaatggacagtgtacagatatcgatgagtgtcgg
cagacctccaacctatgtgccaacggcctctgtgaaaacactctcggtagctaccggtgc
atttgtcgcaccgggttcaaactgcagggcagcgtctgtgttgacgttgatgaatgtgca
gactcctcacagtgtcctgggcaacggtgtgtgaattctgaaggctcctacaagtgtatc
gcctgcaaagctggccacagaatgcaagatgggttatgcgcagatgtggatgaatgccag
agccctgacacctgtggtgcagcgaggctgtgtgtgaacacggacggctcctatcgctgt
gactgtcaaccaggctacagaaccactggccttggacgccaatgtcgagacgtcaacgag
tgtctagagggggagtactgcttccccaggggagagtgtgtgaacacagagggctcctac
ctctgtgtgtgttcgcagggttacaccaccagcagcgacgggagctcctgcctagatgtg
gatgagtgtgccaggtcaggcccgggggtgtgccaggatgggcgctgtgtcaacacagag
ggctcctaccagtgccagtgccaagtgggattcaccaccaacccagagaagacagcctgt
ctggatgtagatgagtgctcagagggagcagtgtgtcagacacagcgttgtgagaacacc
attggctcctaccgttgtatcacctcctgtgagccgggctaccgggtcacccgcaccgga
gagtgtgtcgatgtcaatgagtgtgccaatgagaccgtatgcggggaacatgcgttctgc
cagaacctaattggaacataccagtgcatgtgtgaccagggctacacagccaccagcgat
gggaagggatgtgtggatgaaaacgagtgtgagacgatgcagggcgtgtgtggcgcggcg
cgctgtgagaatgtggatggctccttcatgtgtgagtgtccaggagagggggaagagttt
gatacgcgctcaggacagtgcctcagcacgccccgaccaggtcttccagtgttctctggc
ggctcctcctcgtcttcctccaccaccggcctcggtccccagcgtcggcccgatacgtcc
cagctgccccctgcccggcctggcgagttgagggagtgttactacaacaccgaggagcag
agctcgtgcagcgtcctggcccgcaacaccacccagcaggagtgctgctgcaccgtgggc
cagggctggggaatgggctgccagttcgacccctgtcctcagctaggcacagccgagcac
caggcgttgtgccccagcggacgaggatatgtgactgggccaggagcgtttagctacaaa
gatgtggatgagtgtaaactgttccaccctgaggtgtgtaagagcggtgtatgtgtcaac
aacatccctggctactcctgctactgcaccagtggctactactatgacaacgtgtttctg
gagtgcatcgatgttgatgagtgtgaggcaggggaggacagctgtccagggggaatctgc
gtcaacacattaggctcacacttctgtacctgcgtgcctcctcttgtgttggacgacact
caacgcagctgtgtcaattccactgacctcgccgtggatgagaagctgtccttctgctgg
cagtatgtcacaccagacctggtgtgtcagagccccctgctgggcggacaggtcaccttc
agtgagtgctgctgtctgtatggagagggctggggactgcagtgtgctctgtgtcctgcc
agagactcagaggactatgaggctcggtgtaacgtcttcctgaggcccccagagtttcct
ccccccttccctgaccgctacggtccggacccagggccaggtagaggaggaggaggaggg
gggtatcgcgtgccctatggaccggactccttcccagaccccatcccccgcaggcctgag
tacccccggcctgattatgacgactacacaccaccagggggcagcaggtctggcttcaga
ggcagaacacccagcaccttcagggtcccagagagcccatacagacagccctcaggatac
attcctgagcggtactatgacgaggacgactacggcccgcctgacgctcctccgagacct
cccttccgcaccctcccagaccctcgttctgagctctcctttggggcgcggccccccatc
cccgagggcctccctctgagtctggcccccctcccggacagtgacccctacagtgaggag
gaggaggaggggccagaaccctggcgtgtgggaccccctttccctgacagacgggggcca
ggtggaggcccaaggagagtctatgagagacaatatgagccgtatgcaggcctgagcaca
gaggactgtgggatactgcacggctgtgagaacggcaggtgtatccgggtggcggaggga
tacacgtgtgactgctacgagggatacgagctggacatgacctccatggcctgcatagac
atcaatgaatgtgaggatcctgacaacgtatgtgcgagcggccgatgcatcaacacagac
ggctcctatcgctgtgtgtgtcaccggggctacgtcatgtcccgccggcacaaccactgt
gtggcagcataa
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