Oncorhynchus gorbuscha (pink salmon): 124005266
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Entry
124005266 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: roundabout homolog 1-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124005266
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124005266
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
ROBO family
124005266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_Rha78A_N
Ig_PDGFR_d4
VID27_N
Toxin_19
Motif
Other DBs
NCBI-GeneID:
124005266
NCBI-ProteinID:
XP_046170319
LinkDB
All DBs
Position
LG19:63992642..64477905
Genome browser
AA seq
1724 aa
AA seq
DB search
MAARLMPLLLLLLLEVLSGACMPGEGQGRYTSGWRWKGDRIHTGAATQDGASEGATSAPT
SEHEDDNSLGYTGSRLRQEDSPPRIAEHPSDLIVSKGEPATLNCKAEGRPSPTVEWYKDG
ERVETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEV
ALLRDDFRQNPADVMVAAGEPAVLECMPPRGHPEPSISWKKDSANIDDRDERITIRGGKL
MITNARKGDAGKYVCVGTNMVGERESEIAELTVLERPSFMKRPGSQVVLVDQSVEFRCEA
RGDPVPTVRWRKEDGDLPKGRYEIREDHTLKIRRLTSADVGSYTCMAENMVGRAEASATL
TVHVVSVPPVFVVRPRNQVVAVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPS
SRVSVSQTGDLTITDAERSDVGYYSCQALNIAGSVITKALLEVTDVVSDRPPPVVRQGPT
NQTVSVDGTVVLSCLATGNPTPTLLWRKDGVLVSTHDSRVKQLDTGALQIRYAKKGDTGI
YTCIASTPSGEASWKAYLEVQEFGVPVLPARPTDPNLIPSAPSKPEVTDVTRTSVTLSWK
PNLTGATPTSYIIEAFSHASGSSWQTLAEYVKTESYVLKGLKASAVYLFLVRAANAYGLS
DPSPITDSVKTQDIPPTSQGVDHRQIQRELGEVVIHLHNPTILSSSSVRVQWTVEQQSQY
IQGYKVMYRTSPEGHQRSDWTVFEVRTPGEDSTVVPQLRKGVTYEFKVRPFFNEFQGTDS
EIKIAKTLEEAPSAAPRGVTVSESGDNGTAIVVSWQPPPEEEQNGVVQEYKIWCLGNESR
YHINRTVDGSTFSLLIPILAPGIRYSVEVAASTGAGQGVKSDVTFFQIDSSGRMTEGVLE
PENTLSQQISEVVKQPAFIAGIGAACWIILMVFSIWLYRQRKKRNGLSTNYAGIRKVPSF
TFTPTVAYQRGGEAVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSMNCCTAGQGN
SDSNLATYSRPADCIANYNNQMESKQTNLMVPEGGVYGDVDLSNKINEMKTFNSPNLKDG
RFVGPGGPGGQPTPYATTQLIQSSILGNNINTDRDRGRGGGGGGEMNEKHGWKPTPVQLQ
KQQEMTSQLHQYNIMEQNKLNKDHYRGGDSPMATTILYNQAHEAHTGGSYNSSDRGSSST
SGSQGQKKGVRTPKLPKQSAMNWADLLPPPPANPPPCRNMEEYSLSMDESYDPDMQCSLP
PSRMYLQPDELEEEEEEEEEMERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQDELQPM
LQDTADSIGSGHERRRHAVSPPSRPLSPSHTYGYISSPMSLDTDGMERGGDVGGREEEEE
EEEGDETDAEVAKVHHHHTHPHHPHHPQQMHPRRLLLRGLEQTPASSMGDLESSVTGSMI
NGWGSASEEDNASSGRSSALSSSDGSFFTDADFAQAVASAAEYAGLKVAKYTNPTQGQEG
GPGGRKYQMTPSGHRPGSPLSTDSNMSTANMQKRPPKKQKQHPAAGHPGLQRREAYPEDL
PPPPIPPPAGLKSPTHPPKTALETRGVMSPKAGEGRDRRGGSGGGYRQREGSDPRTSSSE
RRETQDRQKIPRAGKGNKQEGGSTKARQHPGPEDILPYSRPSFPTVHSPRDIDPRSPSSM
SSRGSGGRRSGEGGAGARRNPNDMGLNTLGAFQPGDDDLEMVES
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaggctgatgcccctgttgctgctgctgctgctggaggtgctgagtggagct
tgtatgccaggggaaggacaggggaggtacacgagtggctggaggtggaaaggtgacagg
atccacacgggcgctgccactcaggacggggccagtgaaggggccacctcggcccccacc
tcagaacacgaggatgacaactccctgggctacacaggatcccgtctgcgtcaggaggac
tccccaccccggatcgcggagcacccctctgacttgatcgtgtccaaaggggagccggcc
accctcaactgcaaggcagaggggcggcccagccccacggtggagtggtacaaggacggt
gagcgggtggaaacggaccgggacaaccctcgatctcaacgcatgctgcttcccagcggc
tccctcttctttctacgcatcgtccacggacgacgctccaaaccggatgagggctcctat
gtctgcgtcgcccgcaactacctgggagaagccgtcagtcacaacgcctcgctggaagta
gcattactacgtgatgacttcagacagaatcctgcagatgtgatggtggcagcgggcgag
cctgcagtcctagagtgtatgccccctcgcgggcatcctgaacctagcatatcctggaag
aaggacagtgccaacatcgatgacagagatgaacgaatcactatccggggaggaaagctg
atgataaccaatgccagaaaaggcgatgctgggaagtatgtgtgtgtcgggaccaatatg
gtgggagagagggagagtgagatcgctgagctcactgtgctcgagcgacccagctttatg
aagcgtcccggcagccaggtggtgctggtggaccagagcgtggagttcaggtgtgaggcc
cggggtgacccagttcccaccgtccgctggaggaaagaggacggagacctgcccaaggga
agatatgagatccgtgaggaccacaccctgaagatccgtcgtctgacctctgcagacgtg
ggttcttacacctgcatggcagagaacatggtgggcagggcggaggcgtcggccaccctc
accgtccacgttgtgtctgtgccccctgtgtttgtggtgcggcccaggaaccaggtggtg
gcggtggggaggaccgtcaccttccagtgtgaggcaacaggaaaccctcaacctgctatc
ttctggcagagagagggcagccagaacctgctcttctcctaccagcccccccagccctct
agccgcgtctctgtctcccagacgggggaccttactatcacagatgcagagcgctcagat
gtgggctactacagctgccaggccctcaacatcgctggctctgtcatcaccaaggccttg
ctggaggtcactgacgttgtgtcggatcgcccacctccagttgtccgccagggtccaacc
aatcagacagtgtctgtggacgggacggtggtcctgagttgcctagcaacgggtaacccc
acccctaccctcctgtggaggaaggacggtgtgttggtgtccactcatgactcccgggtc
aaacagctggacacgggcgcactgcagatccgctacgccaagaagggtgacacaggcatc
tacacatgcatcgcctccactcccagtggcgaggcctcgtggaaagcctacctggaggtt
caagagtttggtgttccagtgctgccggccagacccactgaccccaacctgatccccagc
gccccctccaaacctgaggtcactgatgtcacccgcacctctgtcaccctgtcttggaag
cccaacctcacaggagccacgcccacctcctacatcatagaggccttcagtcatgcatca
ggcagcagctggcagaccctagcagaatatgtgaagactgagtcgtatgtactgaagggc
ctgaaggccagtgctgtctatctcttcctggtccgagctgctaacgcctacggcctgagt
gaccccagccccattactgactccgtcaaaacacaagatatcccccccaccagtcaggga
gtggaccaccgtcagatccagagggagttaggagaagtggtcatccaccttcacaacccc
accatcctctcctcctcctctgtcagagtgcagtggacggtggagcagcagtctcagtac
atccagggttataaggtgatgtaccgaacctctccagaggggcatcagaggagtgactgg
actgtgtttgaggtgagaaccccaggagaggacagtactgtggtaccgcagctcaggaag
ggagtcacctacgagttcaaagttcgccccttcttcaatgagttccagggaacagacagt
gagatcaagatagccaagactctggaggaagctcccagtgcagcccctcgtggggttacc
gtctcagagagcggggacaatgggaccgccattgtggtgtcctggcaaccgcctccagag
gaggagcagaatggggtggtccaggagtacaagatctggtgtttggggaatgagagcaga
taccatatcaaccgtacggtggacggctctaccttctccttgctgatacccatcctggct
ccagggatccgttacagtgtggaggtcgcagccagcactggggcaggccaaggggtcaag
tctgacgtcaccttcttccagatagactcatcggggcgtatgacggagggtgtgttggag
ccagagaacaccctgtcccagcagatcagcgaggtggtgaagcagccggccttcatagca
gggataggagcggcctgttggatcatcctcatggtgttcagtatctggctctaccgacag
cgtaagaagaggaatggcctcagcactaactacgcaggcatccgcaaggtgccatccttt
accttcactcctacagtggcgtaccagagagggggagaggctgtcagcagtgctggaagg
ccaggtttgctgaacattggggagtctgctacccagccctggttggctgatacctggccc
aactcctgctccaatcacaatgactgtagcatgaactgctgcaccgcaggacagggcaac
agtgacagcaatctggctacatacagccgcccagccgactgcatcgccaactataacaac
cagatggagagcaaacagaccaacctgatggtgcctgagggaggagtgtacggagacgtg
gacctctccaacaagatcaacgagatgaagaccttcaacagccccaacctgaaggacgga
cgcttcgttgggccgggtggaccagggggacagcccaccccgtacgccaccacacagctc
atccagtcgtctatcctgggcaacaacatcaacacagacagagacagagggagaggagga
ggagggggaggggagatgaacgagaaacatggctggaaacccaccccggttcagctgcag
aagcaacaggaaatgacctcacagctccaccagtataacatcatggagcagaacaagcta
aacaaggaccactatagaggaggggatagtcccatggctaccaccatcctctataaccag
gcccacgaggcccacacagggggatcctacaacagctctgaccgtggcagcagcagcacc
tctgggagtcaaggtcaaaagaagggagtgcgcacccccaaactacccaaacagagtgca
atgaactgggctgaccttctgcctcctccccctgctaacccacctccctgccgcaacatg
gaggagtactccctgtctatggacgagagctatgacccagacatgcagtgctccctgccc
ccctcccgcatgtacctgcagccagacgaactggaggaggaggaagaggaggaggaggag
atggagaggggtcccactccacctgtcagaggggctgcctcgtcccccgccgcggtgtcc
tacagccaccagtccacagccaccctcaccccctcaccccaggatgagctgcaacccatg
ctccaagacactgccgacagcattggctctggacacgagcgcagacgccatgcagtgagc
cccccttcccgacccctctccccctcacacacctacggctacatctccagccccatgtcc
ctggacacagacggcatggagagagggggagatgttggaggaagagaggaggaggaggag
gaggaggaaggggatgagacagacgcggaggtggctaaggtgcaccaccaccacacccac
cctcaccacccccaccacccccagcagatgcaccccaggaggctgctgctgcggggtctg
gagcagaccccagcctctagcatgggggacctggagagctctgtgacgggatccatgatc
aacggctggggttcggcatccgaggaggataacgcctcgtcagggcgctccagcgctctc
agctcctcagacggatccttcttcacagatgccgactttgcccaggcagtcgcgtctgct
gcagagtacgcaggcctgaaggtggccaagtacaccaaccccacgcaaggccaggaggga
ggccccggaggacgaaagtatcaaatgaccccttcaggccaccgtcctggcagccccctg
tccacagacagcaacatgagcacggccaacatgcagaagaggcctcctaagaagcagaaa
cagcaccctgcagcgggccacccagggcttcagcgacgagaggcctaccctgaagatctg
cccccccctcccatcccccctccagcggggctcaagtcccccacacacccccccaagaca
gccctggagacccggggggtgatgtcccccaaggcaggcgagggcagggacaggagaggg
ggctcaggaggagggtaccggcaacgggagggatcggacccccgtaccagctcctctgag
cgccgggagacccaggacagacagaagatcccccgtgcagggaaagggaacaaacaggag
gggggcagcaccaaggcacgccaacacccagggccagaggacatcctgccctacagccgc
ccctccttccccacggtccacagtccccgagacattgaccccagatcccccagctctatg
tcctcccggggctcaggggggcggcggagtggagaggggggggcaggggcccgcaggaac
cctaacgacatgggcctcaacaccttgggagccttccagccgggagacgatgacttagag
atggtggagagctga
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integrated database retrieval system
