Oncorhynchus gorbuscha (pink salmon): 124005288
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Entry
124005288 CDS
T07892
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogo03009
]
124005288 (nop2)
Enzymes [BR:
ogo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
124005288 (nop2)
Ribosome biogenesis [BR:
ogo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124005288 (nop2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
124005288
NCBI-ProteinID:
XP_046170363
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All DBs
Position
LG19:6893810..6900556
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AA seq
745 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKESIEKEEPKKGFTDENSEWLKPAKRKREVGQSDNEDDSDSQWEQEEDEGQEGGENNKG
KKLLIEGDGDDDDLVDDYGALEDSSEGEGEVDGDGEELLPIERAARKQKKLQEAMGQESD
DDENKGKSGDEDMDEDDTVQANLDDMDKFILPGAEEIAKEGVLLVDLQTIHQRIKDNVDV
LSHFATKREEGKERTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEANEIQRP
VTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLAGHYMLQ
GASSFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLKSVVGNI
HRLGVTNSMICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSKDESDIQRLAH
LQKELILAAIDSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTGLDFGKE
GFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVDKDGDEETKPSEA
VEVTADSSDEDGPSKAGSKNKSKKQKPVPGKPAVSQKATANGKPDKSIGKKTTNPSTLKK
NEKPTGPKKAKIAKMDGGTVKVDGEHKKSNTVKTEGETTKQSKEGSRFEKKGDKQRKSPM
QSKKRMGKNKFNKLKKLLKKEEVGQ
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacttatgtgaagaaggggccggggcggaagtccagg
aagcagaaaggagcagagactgagctggccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcaggtccaggaaaagagctgggaagcgagctcaagtgaccaaaaag
cccaaggaaagcattgagaaggaggagccaaaaaaaggattcacagatgaaaacagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggccaatcagataacgaggacgacagt
gacagccaatgggagcaggaagaggacgagggacaagagggaggggagaacaataaaggg
aaaaaactgctaattgaaggagacggtgacgatgatgacctggttgatgactacggtgca
ttggaggacagcagtgaaggagagggagaagtagacggtgatggagaggagctgctcccc
atcgagcgagctgccaggaagcagaagaagctgcaggaagcaatgggccaggagagtgat
gatgatgaaaataaggggaagagtggagatgaagacatggatgaagatgacacggtacag
gctaatttagatgatatggacaaattcatactacctggagcagaggagattgcaaaagag
ggtgttttgcttgtagacctgcagaccatccaccagagaataaaggacaacgtggatgtt
ctctctcactttgctaccaagagggaggaggggaaagagagaacagagtacctctctctc
ctcaaaaaggatctttccacttactacagctacaacaatttcctcatagacaaactgctg
gatatcttcccagtgtcagagctgattgatttcctggaggccaatgaaattcagcgacct
gtcaccattcggaccaatacactgaagacaaggaggagggacttggctcaggccctgatc
aacagaggggtgaatctggatcctctagggaagtggtctaaagtgggcctggtcattttc
gactcctcggtacccataggtgcgaccccagagtacctagctggtcactacatgctgcag
ggagcctccagcttcctgcctgtcatggctctctctccccaggagggggagactgtgctc
gacatgagctcagctcccgggggaaagaccacttatatggcccagttgatgaggaacaca
ggtgtgattgtggccaatgatgccagtgctgacagactgaagagtgtggtgggcaacatc
caccgtctgggagtcaccaactcaatgatctgtaactacgacgggaggcagttccccaag
gtcatgggggggtttgacagagtgctgcttgatgctccctgctcaggcacaggagtaatc
tccaaagaccctgctgtgaagaccagtaaagacgagtctgacatccaacggttggcccac
ctgcagaaggagctcatcctggcggccatcgactctgtcaacgctgagtctccctctgga
ggctatctggtgtactgcacatgctctataatggtggaggagaacgagtgggtagtggac
tatgctctcaagaaaagaaatgtcaaactcgtccagactggactggactttggcaaagaa
ggtttcaccagattcaaagagagacgattccatccctctctgaaactctcacgccggttc
tatcctcattcccacaacatggacggtttctttgtggccaagctgaaaaagttctccaac
acggtcccaaccacagcagttgacaaagacggagacgaggaaaccaagccatctgaggca
gtagaggttacagctgattcctctgatgaggacgggccatctaaagcagggtctaagaac
aagtccaagaagcagaagccagtccctggcaagccagctgtgtcacagaaggccacagcc
aacgggaagccagacaaaagcatcggcaagaaaacaacaaacccaagcaccttgaaaaag
aatgagaaaccaactgggccgaaaaaggcaaagatcgctaagatggatggtgggactgtg
aaagtggatggagagcacaagaagtccaacacagtcaaaacagaaggggaaacgaccaaa
cagtcaaaggaagggagcaggtttgagaaaaagggcgataaacagaggaaatcccccatg
cagagcaagaagagaatggggaagaacaaattcaataagttaaagaagctgctgaaaaaa
gaagaggttggacaatga
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