Oncorhynchus gorbuscha (pink salmon): 124005334
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Entry
124005334 CDS
T07892
Name
(RefSeq) high affinity nerve growth factor receptor-like isoform X1
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04020
Calcium signaling pathway
ogo04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124005334
04020 Calcium signaling pathway
124005334
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
124005334
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
124005334
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124005334
Protein kinases [BR:
ogo01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
124005334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
LRR_8
ig
Ig_2
TrkA_TMD
LRR_5
C2-set_2
Atypical_Card
C2-set_3
CFC
Motif
Other DBs
NCBI-GeneID:
124005334
NCBI-ProteinID:
XP_046170429
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Position
LG19:20704852..20732206
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AA seq
806 aa
AA seq
DB search
MAVGSAPWAAPLALVLLAITLVVPALGGCPSACRCSFAMLQCLEPNGIATIPMLALQESE
NVTEIYIENQAELENITEVDLANYRELKNLTVTFCRLAYISANAFQHNLKLQYVNLASNS
LEHISWKVFHFLPLLNLVLRDNPLECSCDIHWLQQWQLNDHSDLDNQPLHCLSNGHARRL
DSLVMENCTVPDVAIVHANTKVQEGGNLTFVCQVTGVPVPVVRWRTNKLLSRYTVQERFW
GSTLELQLQLWNMSSEDNLHNLTCEAENRAGPGDEKVTLDIEFPAKIIFLHNAEQQHHWC
FPFKVDGNPEPSIRWLFNGSNLTEGRYTYTQFIPDSDDGSVKHGCLFLNKPTHLNNGLYT
IIVGNRLGVDQATATGMFMDNPFDPFDPEGIIPVLEESDPLPTNKSNEDVTENLESRVFG
VSVAVGLAVFACTFLLIMVLVINKCGQQSKFGIHRSSVLGTEDDLAVSLRFMNLGASPPS
SDDSGMSSFVENPQYFCGIFKDKDMCVQHIKRQDIVLKWELGEGAFGKVYLAECANLSPD
SDKMLVAIKTLKDANESTRQDFQREAELLTVLQHQNIVRFYGVCTDGEPLAMVFEYMRHG
DLNRFLRAHGPDAHILEEVKMPPLGQLTLPQMLNIAAQIASGMVYLASLHFVHRDLATRN
CLVGDMGEGLMVKIGDFGMSRDIYSTDYYRVKVGGRTMLPIRWMPPESIMYRKFTTESDI
WSFGVVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVHGLMQGCWQREPQQ
RLVIKDIHSRLLALVKSPPIYLDILG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgggttctgctccatgggcagccccactggccctggtacttctggcaatcacc
ctggtggtgccagccctgggagggtgtccatccgcctgccggtgctccttcgccatgcta
cagtgcctggagcccaatggcattgccactatacccatgttggcactacaggagagcgag
aatgtcacggaaatttacatcgaaaatcaagccgagctggagaacattacagaagtagac
cttgccaactatagagagttgaagaatctcacggtcacgttctgcaggctggcgtacatc
tcggcgaatgctttccaacacaacctcaagctccaatatgtaaacctggcatctaactcc
ctggagcatatcagttggaaggtgttccattttcttcccctgctcaacttggttttgaga
gacaacccccttgagtgctcctgtgatatccattggctgcagcaatggcagcttaacgac
cacagtgaccttgacaaccaaccgctgcactgcctctccaatggccatgcccgacggttg
gactccttagtgatggagaattgcactgtaccagatgtcgccattgtccatgccaacacc
aaggtccaggaggggggcaacctgacatttgtgtgtcaggtgacaggagtgcctgtgcct
gtagtgaggtggcgcacgaataaactgctatctcgctatactgtacaggagaggttctgg
ggctccactttggagctgcagctgcagctgtggaacatgtcctcagaagacaacctccac
aacttgacctgtgaggcggagaaccgggccgggcctggggatgagaaagtgacgttggac
attgaatttccagccaaaatcatattcctgcacaacgccgagcaacagcaccactggtgt
ttcccctttaaggtggacgggaaccctgagccatccatccgctggcttttcaacggctcc
aacctgaccgagggccgttacacctacacacagttcattcccgactcggacgacggctct
gtgaagcacggttgtctattcctcaacaagcccacccacctgaacaacggcctctacacc
atcatcgtggggaacagactgggcgtggaccaagccacggccacggggatgttcatggac
aacccctttgacccctttgatcctgagggcatcatcccagtccttgaagaaagtgatcca
cttcccaccaacaaatctaatgaggatgtcactgagaacctggagagcagagtgtttggg
gtgtcggtggcagtgggtctggctgtgtttgcttgcaccttcctcctcattatggtactg
gtcatcaacaagtgtggccagcagtccaagtttggtattcaccgttcatctgtcttggga
acagaggatgatcttgctgtttcactgcgtttcatgaacttaggggcgagccctccttcc
tctgatgactctgggatgtccagctttgtggagaacccccagtacttctgtggcattttc
aaagacaaagacatgtgtgtgcagcacatcaaaagacaggacatagttctgaagtgggaa
ctgggtgagggggcgtttggcaaagtctacctggcagagtgtgccaacctcagtccggac
agtgacaaaatgctggtggccatcaagactctgaaggatgccaacgagtcgacccggcag
gacttccagagagaggctgagctgctcacagtcctccagcaccagaacatcgttcgcttc
tatggagtgtgtacagatggcgagccactggcgatggtgtttgaatacatgagacatgga
gacctcaaccgcttcctcagggcgcatggtccagacgcccatatcctggaggaggtgaag
atgcccccgctgggccagctcactctaccccagatgctgaacatcgccgcccagatcgcc
tcaggcatggtctacctggcctcccttcactttgtgcaccgggacctggccacacgaaac
tgcctggtgggagatatgggagagggtctgatggtcaagataggagactttggcatgtcc
cgggacatctacagcacagactactacagggtaaaggtgggtgggcgtacgatgcttcct
attcgctggatgcccccggaaagcatcatgtacaggaagttcaccacggagagtgatatc
tggagctttggagtggtcctctgggagatcttcacctatgggaaacagccctggtaccag
ctctccaacagcgaggctatcgagtgcattacacagggccgggagctggagagaccacgc
acttgccccaaggaggtacacggcctgatgcagggctgctggcagagggagccccagcag
agactggtcatcaaggacatccacagccgcctcctggccctggttaagagcccccctatc
tatctggacatcctggggtag
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