Oncorhynchus gorbuscha (pink salmon): 124005340
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Entry
124005340 CDS
T07892
Name
(RefSeq) interferon regulatory factor 2-binding protein 1-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124005340
04121 Ubiquitin system [BR:
ogo04121
]
124005340
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
124005340
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Atypical E3
124005340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
124005340
NCBI-ProteinID:
XP_046170443
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All DBs
Position
LG19:complement(37952750..37958366)
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AA seq
632 aa
AA seq
DB search
MSSSQSYSRRQWCCYLCDLPKMPWAMIWDFSETVCRGCVNYEGADRIEFLIETARHLKIT
HGMQGDRSPGPQPTKHGPGGRDGPMEGGRPPPERFERGRGDYGAPARLPNGLHRIDDGGP
QQDVGGQSPNNARRPMVCTVPPNLMTQGLVGAPHGLLAAVPGLNTRVGGTPLTLSAPMLN
EITKRQLSMGMGVASFLSPEFEKELREKQRNAEALAELSESVRNRADDWAGRPKAVRGAL
LTLSGCTPFNVRFKKDHSLVGRIFAFDAKLTLDFELKIFAEYPCGSGYMFSSLAALVKQM
FHDSQKDSGNKVINLGLKYVEYEKRHGAGDWRLLSELLSDSVRAFKDTPGPDVLPQPYLD
TSCSMLPTALCHMARSAPPARLRRRKASPELQGGEVVTTEEQLRQHWPMGMYPGMAIHLA
ASSLPSTSQPPPHQEGSASHSHSSDPSPITALMSVADNAGAAAGQSPREAPSSSSSGGGG
LGHSSLTVRQSSSSPMAACPAGQQRHLASRNGEPQGASNSTGGTTAALPLAGASDQGAGD
PSGSSGPPLCCTICHERLEDTHFVQCPSVAAHKFCFPCTRDFIRSQGAGSEMFCPSGERC
PLVGSNVPWAFMQGEVTTILAGDVKVKKERDP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcccagtcgtattcaaggcggcagtggtgctgttacctttgcgatttgcct
aaaatgccatgggctatgatctgggactttagcgagactgtctgccgaggctgtgtgaat
tatgaaggggcagaccgtattgaattcctcatagagacggccaggcatttgaaaataact
catggtatgcagggtgacaggtccccgggtccacagcccaccaaacatggcccaggtgga
agagatggacctatggagggtggtaggccacctcctgaacgctttgaaaggggtagaggg
gactacggagccccagcacggctccccaacggtctgcacagaatcgatgacgggggccca
caacaagatgtcggtggacagagccctaacaacgccagacgacccatggtgtgtaccgtt
ccacccaatttgatgacacaaggccttgtgggtgctccgcacgggttgctagcagctgtg
cccggtttaaataccagagtcgggggaacccccctcaccctctctgcccccatgctgaac
gagatcaccaagaggcagctgagcatgggcatgggtgtggcctccttcctgagccctgag
tttgagaaggagctgagggagaagcagaggaacgcagaggctctggccgagctgtcggag
agtgtacggaaccgagcagacgactgggccggccgacccaaggctgtacgaggggccctg
ctcaccctctccggctgcacccccttcaatgtgcgcttcaagaaagaccacagcctggtg
gggcggatctttgccttcgatgccaagctgacgctggactttgagctgaaaatctttgca
gagtacccgtgcggctcggggtatatgttctccagcttggcggcgctggtcaagcagatg
ttccacgacagccagaaagactctgggaacaaggtgatcaacttgggcctgaagtatgtg
gagtacgagaaaaggcatggcgcgggggactggcgactgctctctgagctactgagtgat
tcggtacgggcctttaaggacacccccggccctgacgttctcccccagccctacctggac
accagctgctccatgctgcccacagcgctgtgtcacatggcccgctcggcaccaccagcc
cgcctgcgccggaggaaggcttccccagagctccagggtggagaggtagtgaccacagag
gagcagctccggcagcactggcccatggggatgtacccgggcatggctatccacctagct
gcctcctccctacccagcactagccagccacctcctcaccaggagggctcggcctcccac
tcccacagcagcgacccctcccccatcacagcactgatgagcgtggctgacaacgcgggt
gcagccgctggccagtcacccagagaagcccctagcagcagcagtagtggtggtggaggc
ctgggccactcctccttgacagtgagacaaagcagcagcagccccatggcagcctgccct
gcagggcagcagcgccacctggcctccaggaacggggaaccccagggagctagcaactct
acagggggcaccacggcagctctccccctggctggggcctcggaccagggagcaggggac
ccctccggctcctctggtccccctctctgctgcaccatctgccacgagcgcttggaggat
actcactttgtccagtgcccgtctgtggcggcccataaattctgcttcccttgcaccaga
gactttatccggagccagggggccggcagcgagatgttttgccccagtggagagaggtgt
cccctggtaggctccaacgtgccctgggccttcatgcagggagaggtcactaccatcctg
gctggagacgtcaaggtgaagaaggagcgcgacccctaa
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