Oncorhynchus gorbuscha (pink salmon): 124005508
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Entry
124005508 CDS
T07892
Name
(RefSeq) toll-like receptor 12
KO
K18807
toll-like receptor 12
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ogo04054
]
124005508
Pattern recognition receptors [BR:
ogo04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
124005508
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_9
DHU1_N
Motif
Other DBs
NCBI-GeneID:
124005508
NCBI-ProteinID:
XP_046170801
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All DBs
Position
LG19:complement(1537310..1568683)
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AA seq
978 aa
AA seq
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MTFVFWVWRPGVSVLLLLCVCDGAEGVIRRHCDCYEEDLYVQKDIGGFIQCSLKPGLGPY
AECTEITDLRSGLEEVFPDVRSLCILHSSSSLPADSFSHIPLLEHLYLDGSHLAKVTSGA
FAGLPKLRFLHILVSSSWGGVNVTLEPGVFQGLSSLEELTLAGMSLALAPPTLLDPLVRV
RSLRVDRAGARDLGELFCLLSPGMEKLETLELPGSMVSSIQNGGCSGSNPWPTVLLSRIR
ILDLSGNPVRRVEPKSLSVFQNLSSLSLSMVDVWVGQLWGSGMGRVNKLYLSSYTLGHFT
PSLSDLCTLVVKHGVESLDLHLALITAFTAEVMKRCGPGLRQLSVTSEDLSGMDLGFWTG
TGRIQGLMMVLTKLTNASFCSAGGGRVWNLTSLILHENHLTEITTDQFSCMPLLERLDLS
GNHISSLAHRALQGMPLLRVLDLTHNKISMLGEDDFEGLPALEVLLLEGNKISGGIAHGV
FRRQHRLQDLSLGEIDIIYQLYLNMLFLGFPTKLQHLLIDTGPGTYLTVGHVPAPEFPMV
LELRGKMIQSSDCENNMFPMVRELKVGEGTKFDCNNIFLAPYFLNLESFEFSANPEKFST
PYTTINQLRKLKRLKLTNLNFSNHTDPSVTFRNLTELRSLVLINCRLNFLTRSMFTDLVS
LRVLRLYSESPLILLEGVFIPLLSLSTLVFDQVDFRCDCSNGWLLDWADNSRKTQVVLLQ
RQQCIWHYQRLNFLSTMERLCQTEDDFLSYVSTTATVCTLLCLALGYRFLRWPCVVLFFR
LRGWVERRVGRRWWRRKRRMGGQWEDLIEGEEGEEKEEEEVRYDAFVSFSSGDEAWVLGE
MAPMLEEGEPRLRLCLHHRDFEVGKGIVDNIAENIYCSRRTVCVLTRRYLRSDWCGLEMR
VATHRLLSEHSHRLILIFLEHISPFELSAFHRLAKLARTRTYLDWPQDEDERVTFWERLR
RNIAERDADELHDPPEAS
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttgtgttttgggtgtggaggcccggtgtgagtgtgctgctgctcttgtgtgtg
tgtgacggagcagaaggggtgatcaggcgtcactgtgactgctatgaggaggatctgtat
gtacagaaagacatcggagggttcatacaatgttcccttaagcctggcctgggaccctat
gctgagtgcacagagatcactgacctcaggtctgggctggaggaggtgtttcctgatgtg
cgttctctttgtatccttcactcctcctcctccctgcctgcagactccttctctcacatt
cccctcctggagcacctctatttggatggctcacacctggcaaaggtgacctcaggggcc
ttcgctggtctgcccaaactaaggttcctccacatcctcgtctcctcctcctggggggga
gtgaacgtcacactggagccaggggtgttccagggcctgtctagcctggaggagctcacc
ctggctggtatgagtctggccctggccccccctactctgctggatcccctggtacgggtg
aggagcctgagggtggacagggctggagcgagagacctgggggaactgttctgtctcctc
tcccctgggatggagaaactagagaccctggagctgcctggcagcatggtcagctccatc
cagaacggaggctgctctggatccaatccgtggcccacagtgctcctgtccaggatccgg
atcctggatctgagtggaaacccggtgcgaagggtagagccgaagtctctgtctgtgttc
cagaacctgtccagtctgtccctgtctatggtggatgtctgggtgggccagctgtggggg
tctggcatggggagggttaacaagctctacctgtccagttacaccttgggacatttcacc
cccagcctgtctgacctgtgtactctggtagtaaaacatggagtggagtccttggatctg
cacctggccctgatcacagccttcactgcagaggtcatgaagaggtgtggtcctggtctg
aggcagctgtctgtgacttctgaggatctgtctggtatggatctggggttctggactggt
accggtcggatacagggtctgatgatggtcctgaccaagctgaccaatgcctcgttctgc
tcagcagggggagggagggtgtggaacctcacctctctcattctccatgagaaccacctc
actgagatcaccactgatcagttctcctgtatgcccctgctggagcgtttggatctgagt
gggaaccatatctcctccctggcccaccgggctctccaggggatgccgctcctccgcgtc
ctcgacctcacccacaacaaaatctccatgctgggagaagacgactttgagggtctgcct
gctctagaggttctcctcctggaagggaacaagatctcagggggcatcgctcatggggtg
ttccgtagacagcatcgactccaagacctcagcctgggagagatagacattatctaccag
ctctacctcaacatgctgttcctgggcttccccaccaagctccagcacctcctcatcgac
acaggcccaggaacctacctcaccgtaggccatgttcccgcccctgagttccccatggtc
ctggaactcagagggaagatgatccagtcctctgactgtgaaaacaacatgttccccatg
gtccgagagctgaaggtgggcgaggggacaaaatttgactgcaacaacattttcctggcc
ccctacttcctcaacctggagtcgtttgagttctcagccaaccctgagaagttttccacc
ccctacaccaccatcaaccagcttcgaaagctgaagaggctcaaactgaccaacctcaac
ttctccaaccacacagaccccagtgttaccttcaggaacctgacggagctcaggagccta
gtgctgatcaactgtcgactcaacttcctcaccaggtccatgtttacagacctggtgtct
ctacgtgttttgaggctgtacagtgagagccctctgatcctgttggagggggtcttcatt
cccctgctgtctctctccaccctggtctttgaccaggtcgacttccgctgtgactgctcc
aacggctggcttctggactgggctgacaactctcgcaaaacacaggtggtgctcctgcag
cgacagcagtgcatctggcactaccaacgactcaacttcctgtccaccatggagcgcctc
tgccagaccgaagacgacttcctgtcctacgtctccacaacggccactgtgtgcaccctc
ctgtgcttggcgctaggataccgcttcctccgctggccctgtgtcgttctattctttcgt
ctgagaggatgggtggagcgacgtgtggggaggaggtggtggaggaggaagaggaggatg
gggggacagtgggaggacctgatagagggggaagagggagaggagaaggaggaagaggag
gtgaggtatgatgcgtttgtgtcgttcagcagtggtgatgaggcgtgggtactgggagag
atggccccgatgctagaggagggggagccacgactacgactgtgtctgcaccaccgagac
tttgaggtagggaagggcatcgtggataacatcgctgagaacatctactgcagcaggagg
acggtgtgtgtgttgaccagacgctacctgaggagtgactggtgtggcctggagatgaga
gtggccacacaccgcctgttgtctgagcacagccacagactcatcctcatcttcctagaa
cacatctcccccttcgagctgtccgccttccacagactggctaagctggccagaacccgg
acctacctggactggccccaggatgaggacgagagggtaacgttctgggagcgtttacgc
cgaaacatcgcagagagagacgcagacgaactgcatgatcctccggaagcatcctga
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