Oncorhynchus gorbuscha (pink salmon): 124005511
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Entry
124005511 CDS
T07892
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04517
IgSF CAM signaling
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124005511
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124005511
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124005511
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124005511
Intermediate filaments
Intermediate filament-binding proteins
124005511
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
TMP_3
Motif
Other DBs
NCBI-GeneID:
124005511
NCBI-ProteinID:
XP_046170807
LinkDB
All DBs
Position
LG19:complement(37751352..37831367)
Genome browser
AA seq
2726 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLAGSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTVILRFQIQVIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVHIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDNAIE
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEIETEGYYDIRRISARKENILGQWSLLKELVVGRKARLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLEVDDLLQKHSLQEADITAQAERVQTLNSAALKFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRRSELEESQHLWAFFQEVEESEAWIREKSSI
LATQTCGKDLSSVLRLLQKHKTLAGELLAHRSLLQQTMKKGKQILMEKSFGTGGIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVCEAVDKHRMHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYAEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEHFEGISVEWEELKRTLQGCEDSLMVAGRLQQFIQDLDSFLTWLVH
TQTAAASDELPNALEEAERLINRHAALKEEIGRYEEDYDRLQAVNELLEAEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPAT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIRERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELSQNKEWLEKIEREGQQLIQEKPELSPVVRRKLGEIRECWQDLESTTQAKARQLFEAN
RADLLVQSYASLDHRLHQLEGQLCYVDQGQDLTSVNKQLKKLQTMECQMEEWYKEVGELQ
VAAASIPQQGQVMETVGERQAAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAATSQEHGSSLQAVQRLMKKNQTLQRELQGHRARVEDVLERANVIASIRSPEAD
CVRAGLEQLSGLWGLLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKCQSQMDRLYV
SLKDLVEERKSRLEQQYWLYQLNHEVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSLGQERVTAVNQMVDELIDYGHAEAATIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKFFTDCREILAQIDDKQRRLPEVRARQGGTANTSTLQRLMHSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPSIPHSDITGSGLSGPFRDVSSVEVLMNYHQSLKSEVEAR
SKSVLQCIEMGKTLLAARNPAAEEIKEKLDKVVAKQYELSEKWDKHWEVLQHMLEVHQFA
QEAVVAEAWLTAQEPFINSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVE
KMKAEQSKLPPTPLLGRKVFLDPQETSPARSQGSPLMRRIIYEQAEHRAERPSQEPLPSS
VARRLGSTVANYTPIMNGSSGYRSSLEAWAMPVMGGVVGGVVGVAAGLGTTAMEARGVAA
GLGTAASEARGLAVELVTPAVEAKGIAASLVTGAATAVEVKASQYLRQPKIKHMDDMVTP
MLVACRLEKVREKEVREREQRERERDILLIEPAPVMPVMAEVVLQEMGREGMGRERLNSE
PSSRDHRAGSSRSEPQQRDRDRDSRDSRDSHREARLERQHSSEVLMIQARRDELPQEVWR
ERAERKERKLERQTSSEQEGHGHEGRRKDRHRTERQESSEHDTAKEQSDRRSTEKRSGGQ
TLFDIVEQLKDREAATARGEVPKVPNGVPEKSSGRPDRPRARDRPKPRRRPRPKDHSAGE
ATTRRSRSAPEPGMAQSVSPSVLQPPSHTAHHEGFLFRKLDIETMRKSSNSRSWVNLYCV
LNKGEIGFYKDAKNTATPYNNEPMLNLGHCHCDVTLGYKKKKNVFTLKTKDGSEFLFHAK
DESQDDLKAWTTNINKSIAEHEEIAKWGQPQPTTSSTDEGTRRDGSKADNKSDRGERPER
AERSERSDKGETKSDTKRSEKSSKKK
NT seq
8181 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagacctggacaacgcggaggcccaacgccagctcaacaacaac
aacacccgtctggcaggcagctcgggacactgggaaactgaggtcaccagctccaagctg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacctggcaagagtgtcctgtcgaatcgctgatctctat
aacgacctccgggacggctacatgctcaccaggctgctggaggtcctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcgtatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggagaacgtcggctcacacgacatcgtc
gacggcaaccaccgtctcacccttggcctcatctggaccgtcatccttcgcttccagatc
caggtgattaagattgagtgtgacgacaaccgggagacgcggtcggcaaaggatgccctg
ctactctggtgccagatgaaaactgctgggtactctgaggtccacatccagaacttcacc
acctgctggagagatggtctcgccttcaacgctctcattcaccgacacaggcctgatttg
attgaattccataagctgatccggtcaaatgccacacacaacctccagcaagccttcaac
attgctgagcagaacctggggctcaccaaactcctggaccctgaagacgtgaatacagag
aacccagatgagaagtcgataataacctatgttgtgtcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtgttggacaatgccattgag
ggtcagaagatgatcgatcgatatgaggctctggcctcggagctcctggagtggattgag
aagaccataggcatcatcagcaaccagaagtttgccaactccttaacgggtgtccagcaa
cagcttcaagccttcaccacctactgcaccatcgagaagcccatcaagttccaggagaag
gggaacctggaagtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgcctcatgaagggaaactcatctctgatatcaacaaggcgtgggagaggctg
gagaaggcggagcatgagagaggtgtggccctacgtcaggagctgattcgccaggagaag
ctggagctgctggcccagcggtttgaccacaagaccaccatgagacaggcgtggctcaac
gagaaccagcgcctcgtgtctcaggataactttggctacgacctgccagcggtggaggcc
gccatgaagaagcacgaggccattgaggcagacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggctggggagatagagacggaaggctactacgacatccggcgcatc
tcggcccgaaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaaggcccggttggagaagaacctggctctgcagaagaccttccaggacatggtctat
atgatcgactggatggaggacatgcaggtccagctcctgtccaaagacttcggcaagcat
ctgctggaggtggacgacctgctgcagaaacacagcctccaggaagctgacatcacagcg
caggcagagagggtgcagacccttaactcagccgctctcaaattcaccaccatcgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccacgtcagcacctgcctg
gaggagctcaagcagctggcggccaagcggcgctcggagctggaggagtctcagcacctc
tgggccttcttccaggaggtggaggagtccgaggcctggatccgcgagaagagctccatc
ctggccacccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggcccaccgctccctcctccaacagaccatgaagaag
ggcaagcagatcctgatggagaagagtttcggcacggggggcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggaccaggcggcgcagagactgggccacctg
caggaggcactcaatttcttccagttcagcacagagacggacgacctgctggcctggctg
caggacgcctaccgcctggtttccagcgaggactttggccacgatgagtactccacccag
tcactgctcaagaagcaccggggtgtgtgcgaggccgtggacaagcaccggatgcacgtg
gtaactctgcgcaaacacatggtggcgctgccactgcattaccgggagctggacgaggtg
cagtcgaggatgggcgaggcggagcagctgtacgccgaggtggccgaggtggccgtcctg
aggcagcagtggctgcacgacgcgctggccgtctacctcatgttcagcgaggtcaacgcc
tgcgaggtgtggatcgacgagaaggagcagtggctcaacaagatggaggttccagagagg
ctggaggacgtagaggtcatagcccacaggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggacgtgaaccagatagtgcagcagctcctggacagtggtcac
cccagctctacagaggtcagaggctgtcaggaccacctcaacagcagatggaaccgcatc
gtggagatggtggagcagaaaaaggaccacctggactctgtcctccgtctccagaactac
ctgctggagtgtgctgagatcaagtctcagatccaggagaagcgcaaggccatcgacgcc
actcagtacgtgggcagtgacctgggcggggtgctggccctgcagcgccgactctccacc
atggagggggccctggccgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gagctggctatctcgcacccggccaaggccatggaggtcctggagcacttcgagggcatc
agtgtggagtgggaggagctgaagcgcacgctgcagggctgcgaggactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactccttcctgacgtggctggtgcac
acgcagacggcggcagctagcgacgagctgcccaacgcgctggaggaggccgagaggctg
atcaaccgccacgcggcgctgaaggaggagatcgggaggtacgaggaggactacgatcgg
ctgcaggcggtcaacgagctgctggaggccgaggaggctccgctgccatacgcggcgctg
cagcagtggctccagaagctggatgtgggctggaacaagctgctggagatgtgggagagc
cggagggaggtgctggttcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gccgaggccttcctcaacaaccaggagtcagccttggcccacgttgagctccccgccacg
gtggagacggtggaggctgccatcaagaagcacaaggacttcaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggctggagagagcctcattagccagagcaac
atctactcggaccgtatcagggagcgtgtggacaccctggctaacagaggcaaccagaac
cgggaattggcccaacagtggctggagaggctcaacggccagtgggggctccagaggtta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggccttcatg
gccgagctgtcccagaacaaggagtggctggagaagattgagagggagggccagcagttg
atccaggagaagcccgagctgagcccggtggtgcggaggaagctgggggagatccgggag
tgttggcaggacctggagagcaccacccaggccaaggcccgccagctgtttgaagccaac
cgggccgatctgctggtgcagagctacgccagcctggaccatcggctgcaccagctggag
ggacaactgtgctacgtggaccagggtcaggacctgaccagcgtcaacaagcagctcaag
aagctccagacgatggagtgtcagatggaggagtggtataaggaggtgggggagctgcag
gtggcggcggcctccatcccccagcagggccaggtcatggagacggttggcgagcgccag
gccgccgtggagacgcgcatcgtccgcctcatcgagccgctcaaggagcgccggcgcatc
cttctggcctccaaggaggttcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcggctgcctgccgccacgtctcaggagcacggctccagtctccaggctgtg
cagcgcctcatgaagaaaaaccagactctgcagagggagctgcagggccatcgggcgagg
gtggaggacgtcctggaacgagctaatgtcatcgcctccatccgcagccccgaggctgac
tgtgtgcgggcgggcttggagcagctcagcgggctgtggggtctgctgtgggctgagaca
gagagaagacagctggtgctagatgccatgtaccaggctcagcagtactactttgacacg
gccgaggtggaggcctggctcagcgaacaggagctgcacatgatgaacgaggaaaagggc
aaggatgagcccagcacactgcagctactgaagaagcacctggtactggagcagacgata
gaggactacgctgagacgataggccttctctcccagcagtgcagacagctactggagatg
ggacatccagacagtgagcagatcagtaagtgtcagtctcagatggaccggctgtacgtg
tctctgaaggacctggtggaggagaggaagtctcgtctggagcagcagtactggctctac
cagctcaaccatgaggtggatgagctggagcagtggatcgctgagagggaggtggtggcc
agctcgccagaactgggacaggactttgaacacgtcacgatcctgcaggagaagtttaca
gagtttgcgtcggagacgggcagtctgggtcaggagcgtgtgacggcggttaaccagatg
gtggatgagctgatcgactacggccacgccgaggctgccactatcgctgagtggaaggac
ggtgtgaacgaggcctgggccgacctcctggagctcatggagacccgggcacagatgctg
gccgcctcgcaccagctccacaagttcttcaccgactgccgcgagatcttggcccaaatc
gatgataagcagcggaggctgcccgaggtgcgggcgcgccagggtggcaccgccaacacc
agcaccctgcagaggctcatgcacagcttcgagcacgacatccagctgctcgtaactcag
gtgaggcagctccaggagagtgcgggtcagctccggaccatctacgccgggcagaaggct
gaggcgattgccggccgggaacaggaagtgatgcattgctggaaggagctcttgacgtcc
tgtgaggagtgccgagtgcagatcaccacggcaacagacaagctgcggttcttcggggtg
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggcacaggggacaat
ccaagcattccccacagcgatataacgggctctggactctctggtcctttcagggatgtg
tcctcagtggaggtactgatgaactaccaccagagcttgaagagcgaggtggaggcgcgc
agtaagagtgtgctgcagtgcatcgagatgggcaagacgctgctggccgcgcgcaaccct
gctgctgaggagatcaaggagaagctggataaggtggtggccaagcagtacgagctgtct
gagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtgcaccagtttgcc
caggaagcggtggtggccgaggcctggctcacggcccaggagcccttcatcaatagcaag
gagctgggtgccagtgtggacgaggtggagcaactcatccgccgccacgaggccttccgc
aaggccgccgccacctgggaggagcgcttcagctcactacgacgcctcaccacggtggag
aagatgaaagcagagcaaagtaagctccctcccacccccctgctgggtcgaaaggtgttc
ctggacccccaggagacgtcccctgcccggagccagggctccccactgatgagacggatc
atttacgagcaggccgagcacagagctgaaaggccctcccaggaacccttgccctcctcc
gtggcccgccgcttgggatccaccgtggccaactacacccccatcatgaacggctccagt
ggctaccgcagcagcctggaggcctgggccatgcccgtgatggggggagtggttggaggt
gtagtgggggtggcagctggcctgggaacaaccgccatggaggccagaggggtggcagca
gggttggggactgccgcctcggaagccagagggttggcagtagaattggtcacccccgcg
gtcgaggccaaagggatagctgcaagcttggtgactggtgcagccacggcagtggaggtg
aaagcctcacagtacctccggcagcctaagatcaaacacatggacgacatggtgacgccc
atgctggtggcctgtaggctggagaaggtgagagagaaggaggtgagagagagggagcag
agagagagggagagagatattttgttaatagagccagcgccggtgatgccggtgatggcc
gaggtggtgctccaggagatggggagggaggggatgggcagggagaggttgaacagtgag
cccagcagcagagaccaccgggcggggagcagccggtcggagccccagcagagagacagg
gacagagacagtagggacagtagggacagtcacagggaagccaggctggagcgccagcac
tctagtgaggtgctgatgattcaggcacggcgggatgagctgccccaggaggtgtggcgg
gaacgggccgagcgcaaagagaggaagctggagaggcagacgtccagcgagcaggaaggc
cacggacacgaaggccggaggaaagaccgccaccggacggagagacaagagtccagtgaa
cacgacacagccaaggagcagtcagacagacgttctacggagaaaaggtcaggcggccag
accttgtttgacatagtggagcagctaaaagacagagaggcagcaacggcccgaggggag
gtccctaaagtgccgaacggcgtgccagagaagtcttccggacgtccagaccggccgcga
gcacgggaccgccccaagccccggcggagacccaggcccaaggaccactctgcaggagag
gccaccacccggcggtcacgctcagcgccagagccagggatggcccagagtgtgagcccc
tcagtcctccagccgcccagccacactgcccaccacgagggcttcctcttccgcaagctg
gacatcgagaccatgaggaagagctctaacagcagatcctgggtcaacctgtactgtgtg
ctgaacaaaggagagataggcttctataaggacgctaagaacaccgccacaccttacaac
aacgagcccatgctcaacctcggccactgccactgcgacgtcacccttggatacaagaag
aagaaaaacgtctttacgcttaaaacgaaagacggaagtgaatttctgttccatgcaaag
gacgagtcacaggatgatctaaaggcctggaccaccaacatcaacaagagcatcgcagag
catgaggagattgccaaatggggtcagccccagcctactacctcatccacggacgagggc
acgcgccgcgacggcagcaaggccgataacaagtctgaccggggggaaaggccggagagg
gccgagcgctctgagaggtcggataagggtgagaccaaatcggacaccaagcgttcagaa
aagtccagcaagaagaaatga
DBGET
integrated database retrieval system
