Oncorhynchus gorbuscha (pink salmon): 124005596
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Entry
124005596 CDS
T07892
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124005596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124005596
Spliceosome [BR:
ogo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124005596
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
124005596
NCBI-ProteinID:
XP_046170955
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Position
LG19:complement(4865316..4870104)
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AA seq
532 aa
AA seq
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MSLADELLADLEEAGDEGEDGLYPGEEGESDGEAGEGHVEGGLEDIPEEMEVDYSGAESV
SSIAKLRNSKQFSEIMDKIAIYVEKQRKNSEVSGPVEADPEYKLIVAANNLTVEIENELN
IIHKFVRDKYSKRFPELESLVPNSLDYVRTVKELGNNLDKCKNNENLQQILTNATIMVVS
VTASTTQGTMLGEDELKRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSVIVGASTA
AKIMGIAGGLTNLSKMPACNLMLLGTQKRTLSGFSSTAVLPHTGYIYHCDVVQTLPPDLR
RKAARLVSAKCTLASRVDSFHESADGKVGYDLKEEIEKKFDKWQEPPPVKTVKPLPAPLD
GQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVR
QAQVNEATKARISKSLQRKLQKQNMTYGGRSTVGGRSTVGSRSTVGGRSTVGGRSSVRDN
SSGTSSSVAFTPLQGLEIVNPHAAEKKVAEANQKYFSNMAEFLKVKKEGEGK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggctgatgagctcctggctgatctggaggaggcgggggatgagggggaggat
gggttgtacccgggggaagagggggagagtgatggggaggcaggggagggacatgtagag
ggaggtttggaggacattccagaggagatggaggtggactacagcggagctgagagtgtc
tcgtccatcgctaaactacgcaacagcaaacagttctcagagatcatggacaaaattgca
atctatgtcgagaagcagcgcaagaactctgaagtctccggtccggtggaggcagaccca
gaatacaagctcatcgttgctgccaataacctcacagtagaaattgagaacgaactgaac
atcattcacaagtttgtacgtgacaagtattctaagaggttccctgagttggagtccctg
gtgcccaactctctggattacgtccgcactgtcaaggagctggggaacaacctggacaag
tgtaagaacaacgagaatctgcagcagatcctgaccaacgccaccatcatggtggtcagc
gtcacagcctccaccacacaggggacgatgctgggtgaggatgaactgaagaggttggag
gaggcctgtgacatggcgctagagctgaaccaatcaaaacacaggatctatgaatatgtg
gagtccaggatgtcgttcattgctcctaatctgtcagtcatcgttggagcctcgaccgca
gccaagatcatgggtattgctgggggcctgaccaacctgtctaagatgccagcctgtaac
ctgatgctactgggaacccagaagaggaccctgtcagggttcagcagcaccgctgtgctc
ccacacaccggctacatctaccactgtgatgtggtccagactctacccccggacctgagg
agaaaggcagcacgcctggtttcagctaagtgcaccctggcatcccgagtggacagcttc
cacgagagtgcagacggcaaggtgggctatgacctgaaagaggagatcgagaagaagttt
gataaatggcaggagcctccaccagtgaagactgtcaaacccctgccagcaccgttggac
ggacagaggaagaagagaggagggcggaggtatcgtaagatgaaggagcgtctgggtctg
acagagatcaggaaacacgccaacaggatgaccttcgcagagattgaggatgatgcgtac
caggaggacctgggtttcagtctgggccagctggggaagtcaggcagtggacgcgtcaga
caggctcaggtcaacgaggccaccaaggccaggatatccaagtccctacagaggaagctg
cagaagcagaacatgacgtacggcggcaggtccacagttggcggcaggtccacagttggc
agcaggtccacagtcggcgggaggtccacagtcggcgggaggtcctcggtcagagacaac
tcctcaggaaccagttccagcgtagccttcactccgctacagggactggagatcgtgaac
ccgcatgcagcagagaagaaggtggctgaggccaaccagaaatacttctccaacatggca
gagttcctcaaggtcaagaaggagggagagggaaagtga
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