Oncorhynchus gorbuscha (pink salmon): 124005614
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Entry
124005614 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule homolog
KO
K06767
Down syndrome cell adhesion molecule
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124005614
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
DSCAM family
124005614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
Interfer-bind
C2-set_3
fn3_2
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
124005614
NCBI-ProteinID:
XP_046170985
LinkDB
All DBs
Position
LG19:53483032..53618079
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AA seq
2035 aa
AA seq
DB search
MWILAVIFFQSILNVFSEDLRSSLYFVNASLQEVVFASTTGTLVPCPAAGVPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VFREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYVTVVSWEKDTVSLSSGPRFLITTTGA
LYILDVQNEDGLYNYRCTTRHRYTGETRQSNSARLFVSDPTNSEPGILDGFDRREVMASH
RVELPCKASGHPMPKYRWLKDNSPLEPDTRFRQSVTGLLIESAQPTDSGTYVCEVWNSYG
NAEVVGRLMVKQPLKAVVSPRKVKGSVGSKVSLHCSVSGSDEYELSWYRNGEIIYPGNNV
RITGISRENLIMEGMAKSDGGAYQCFARKNKMSAQDFVQVILEDGTPKILSSFSEKVVNP
NEPVFLVCNVKGTPPPSCTWNLDDDPVIKDSHHHPGHYETHEGHVVSQLNITHTKEVDGG
VYRCTCRNSAGAVYHQARINVRGAASIRPMKNITAIAGRDAYVHCRVIGYPYYSIKWYKN
SHLLPFNHRQRAFENNGTLKLSNVQELDQGEYNCRVLVKPHQETNQSVHLNVKVPPYIQP
FAFQRFSIGQRVFIPCVVMSGDQPLDITWQKDGRPIPASLGVTIDNIEFTSSLRISNLSP
DHNGNYTCIARNEAAAVEHQSQLIVRVPPQFVVQPTDQDGIYGKTVTLNCSAEGYPRPTL
VWKHSKGNGVPQFQPIALNSGSRIQLLVNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKS
MYLTIKIPAMITSYPNTTMATVGQQKEMSCTAHGEKPIMVRWEKEERIINPETSRYTVVV
KEVADEVISTLKILPSVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEVEIREVRDR
TIALRWTMGFDGNSPITGYDIECKNKSASWNSAQITKDVSPQLNQATIIELHPSSTYNIR
IFAKNNIGKSDTSNELTITTDEAAPDGPPQEVQLEATSPQSIKVTWRAPHKHLQNGVIRG
YQVGYREYSSGGSFQFNIISMDTTGESSESITLDNLRKFTEYGVVVQAANRAGTGPSSQE
VITKTLEDVPSRPPENVLAMAKSPEVISLSWLTLPKEALNGNLQGYRVIYWANLRDGELG
EIRNVTTSYPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKSA
AATSSVVFVSWLPPLKLNGIIRKYIVFCSNLHPTVMSEFEASPDVYFYRVPNLARNRKYS
IWVVAVTAAGRGNSSETITVEPRAKAPARILTFNGTVTTPWMKDIILPCKAVGDPPPTIK
WLKGNNGTPAPVLIDGRRSVHSNGSFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQV
PPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRL
ENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTHGKEPQFAKEHELFASINSTRVRLNLIG
WNNGGCPITSFTLEYRPVDTAMWTMAQRTSLTKSYILYDLAEATWYELQMKVVNSAGFAE
KKITFATLNADGSTIPPLLKTVDPITDNMSGNEGLKMMVTITCILVAAVMVFILLMVLKR
RRREQRLKRLRDAKSLAEMLMSKNTRTPDTSNKQQAMRMHIDIPRAQLLIEERDTMETID
DRSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDXSDARPGTNPTARRTAKAG
PAASRNRYASQWTLNPPQPPTSSHTLSTDWRLPTPRAAGSVDKESDSYSVSPSQDTDRAR
SSMVSTESASSTYEELARAYEHAKMEEHLRHAKFTITECFISDTSSEQMTAGTNDYTDSL
TSSTPSESGICRFTASPPKPQDVSRVMNMAAPKAHRPGGELVHLPPYLRMDFLLNRGSAS
GGRGSNGGNGGREGGGGETGALGQACLEPQKSRTLKRPPLLEPTPMEVPTSREVQQWQPG
TASTLPQREPTGREATGDLAQAPAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6108 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctgttatctttttccagagcatcttaaatgtttttagtgaagatcta
cgttccagcttatattttgtcaatgcatctctgcaagaggtagtgtttgccagcaccaca
gggaccctggtgccctgtcccgctgcaggggtgccccccgcctcgctgcgctggtacctg
gccaccggagaggagatctacgatgtgcccgggatccgccacgtgcaccccaatggcacc
ctccagatctttaacttcctcccctccagctttagtaagctgatccatgacaatacctac
tattgcacagctgaaaatccttcagggaaaataagaagccaagatgtccacattaaggcc
gtatttcgggaaccctacacggtccgggtggaggaccagaaagccatgagaggcaatgta
gcggtcttcaagtgcattatccctgcctccgtggaggcttacgtcactgtcgtatcgtgg
gagaaagacacagtctcactatcctcaggacctagatttctcatcacaaccacaggagcc
ttgtatattctggacgtccagaatgaggatggattgtataactaccgctgcaccacacgg
catcgctacacgggcgagaccaggcaaagcaacagcgcccggctttttgtgtcagatccc
accaactcagagccggggattctggatggctttgaccgtcgggaggtcatggcgtcccat
cgggtggaactgccctgtaaggcgtcgggccatcccatgcccaagtaccgctggctgaag
gacaacagccccctggagcccgacacacgtttccgccagagtgtcacgggcctgctgata
gagagcgcccagcccaccgactctggcacctacgtgtgtgaagtgtggaacagctatggc
aacgctgaggtggtgggccggcttatggtcaagcagcccctgaaggcggtggtcagccca
cgaaaggtgaagggcagcgtgggtagtaaggtgtccttgcattgcagtgtcagtggctct
gatgagtatgagctgtcgtggtatcgtaacggagagatcatctaccctggcaacaacgtg
cggatcacaggcatcagcagggagaacctgatcatggagggcatggccaagagcgatggc
ggggcctaccaatgtttcgccaggaagaacaaaatgtctgctcaggattttgttcaggtc
attttggaggacggcactccgaagattctgtcctccttcagtgagaaggtggtcaacccc
aacgaaccggtcttcctggtgtgtaacgtcaaaggcactccccctccctcctgcacctgg
aacctggacgacgacccggtcatcaaggacagtcaccaccaccctggccactacgagacc
cacgagggccatgtggtcagccagctgaacatcacccacaccaaggaggtggacggaggg
gtgtaccgctgcacctgcaggaactcggccggggcggtctaccaccaggctcgaataaac
gtaagaggggctgccagcatccgtccaatgaaaaacatcacagccatcgcagggcgggac
gcgtacgtccactgtcgcgtcattggctacccatactattccatcaagtggtataagaac
tcccacctgctcccctttaaccaccggcagcgggccttcgagaacaacggcactctgaag
ctgtccaacgtgcaggagctggaccagggagagtacaactgcagggtattggtcaaacct
catcaagagaccaatcagagcgtccatctcaatgtcaaagttccaccgtacatccagccc
tttgcattccagcggttctccattggtcaacgcgtcttcatcccctgcgtggtaatgtca
ggtgaccagcccctggacatcacgtggcagaaggacgggcggccaatccctgccagtctg
ggggttaccatcgacaacatagagttcaccagctcactgcggatctccaacctgtcccca
gaccacaacggaaactacacctgcattgcacgcaacgaggctgcagccgttgagcaccag
agtcagctcattgtcagggttcctccccagtttgtggtgcagcccacagaccaggatggg
atctatggcaaaactgtgaccctcaactgctctgctgagggttatccacgccccaccctc
gtatggaaacactcgaaaggtaacggggttccccagttccagcctatcgccctgaactct
ggctcccgtatccagctgctggtcaacggctctctgctcatcaaacacgtgctggaggag
gacagcggctactacctgtgtaaggtcagcaacgacgtgggagctgacgtcagcaaatcc
atgtacctcaccatcaaaattccggccatgatcacgtcgtaccccaacaccaccatggcc
acggtgggccagcagaaagagatgagctgcacggcccatggagagaagcccatcatggtg
cgctgggaaaaggaggaacgcatcatcaacccagagaccagccgctacaccgtcgtggtc
aaagaggtggctgacgaggtcatctccactctgaagattttgcccagtgttcgggaagat
tctgggttcttctcctgccatgccatcaactcctatggtgaagacagagggatcattcag
ttaacagtacaagaacctccggaccctcccgaggtggagatccgagaggtcagagaccgg
accattgccctccgctggaccatgggctttgacggaaacagccccatcacaggatatgac
attgagtgcaagaacaagtcagcctcgtggaattcagcccagataaccaaagatgtgtcc
ccccagctgaaccaggccaccattatagagctgcacccctcctccacctacaacatccgc
atattcgccaagaacaacatcggcaagagcgacaccagcaacgagctcaccatcaccact
gacgaagcagcccccgatggccctccacaggaagtacaactggaggccacctctccacaa
agcatcaaagtcacctggagggccccccacaagcaccttcagaatggggtgatccggggc
taccaggtgggttacagagagtacagctctggaggcagcttccagtttaacatcatcagc
atggacaccacaggggagagcagcgagagcatcaccctggacaacctgaggaagttcact
gagtatggggtggtggtgcaggcagctaaccgtgctggcaccggcccctcctctcaggag
gtcatcaccaaaacactggaggatgtcccctcgcgtccccctgagaatgtcctggccatg
gccaagtccccagaagtaatctctctgtcctggttgaccctgcccaaagaggccctcaat
ggaaacctgcagggctacagagtcatctactgggccaacctgcgcgacggagagttggga
gagatcaggaacgtgaccacctcctacccatctctggaactggatggtctggagaaatac
accaactacagcatccaggttctggccttcacccgggccggggacggggtccgaagtgag
cagatcttcacccggaccaaggaagacgtccctgggcctccagcgggggttaagagtgca
gccgccaccagctccgtggtgtttgtgtcctggctccctcctctcaaactcaacggcatc
atcaggaagtacattgtcttctgttccaacctgcaccccacggtgatgagtgagtttgag
gcttctcctgatgtgtatttctacagagtgccaaacctggcccgcaacaggaagtacagc
atctgggtggttgccgtgacagccgctgggcgaggcaacagcagtgagaccatcacagtg
gaacctcgggccaaagctcctgccaggatcctgacattcaacggaacagtgactacaccc
tggatgaaggacatcattctgccctgcaaggcggtcggagatccaccccccactatcaag
tggctgaagggaaacaatggtacacctgcccctgttctgattgatggacgccgcagtgtc
catagcaacggtagcttcatcatccgaacggtgaaagcagaggactctgggaactacagc
tgtgtggccagcaacaactggggctctgatgagatcacgctcaacctgcaggttcaagtt
cctccagaccaaccacgcctcacagttaccaagacaaccaccacatcaatcactctgtcc
tggatacctggggacaacggaggaagctccatcagaggctacatcctgcagtactcagag
gacaacagtgagcagtggggcagctttcccatcagccctagcgagcgctcgtatcgtctg
gagaacctgaagtgtggcacctggtacaagttcaccctgactgctcagaatggagtgggc
cccggacgcatcagtgagatcattgaagcaaaaacgcacggaaaagagccccagtttgcc
aaagaacacgagctgtttgccagcatcaattccacccgggtcaggctcaatctaattggg
tggaacaatggcggctgcccaatcacctcattcaccctggagtaccgtccggttgacacg
gcaatgtggaccatggcccagcgcacctcactaaccaagagctacatcctgtacgacctg
gcggaagccacctggtacgagctgcagatgaaggtggtcaacagcgctggctttgccgag
aagaaaatcacattcgccacgctcaacgccgatggaagtactatccctcctctgttgaag
acagtggaccccatcacagacaacatgtcaggcaacgaggggctgaagatgatggtgacc
atcacctgtatcctggtggctgctgtcatggtcttcatcctcctgatggtgctgaagagg
aggaggagggagcagaggctcaagaggctacgcgatgcaaaaagcctggcagaaatgctg
atgagtaaaaacacacggacaccagacacatcgaacaagcagcaagccatgagaatgcac
atcgacatcccccgagcccagctgctcatcgaagagagagatactatggagactatcgac
gacaggtcgacggtgctgctgactgataatgactttggggagacgtccaaacagaagtcg
tccactgtcacgcacacagtccactaccagtccctgtcgcaggccaccggcccactggtg
gatnnctccgatgcccggcctggaaccaaccccacagcacgccgcactgccaaagcaggc
cctgcagccagcaggaaccgatacgccagccagtggaccctgaaccccccccaaccaccc
acctcctcccacaccctgagcacagactggagactgcccacaccgcgcgccgccggctct
gtggacaaggagagcgatagttacagcgtcagcccatcgcaggacacagaccgcgcgcgg
agcagcatggtgtcgacagagagcgcgtcgtccacgtacgaggagctggcccgagcctac
gagcacgccaagatggaggagcacctgcggcacgccaagttcaccatcacagaatgcttc
atctccgacacctcctcagagcaaatgactgccggcaccaatgactacacagacagcctg
acgtccagcacgccatccgagtcaggcatctgcagattcaccgcctccccgcccaagcct
caggacgtcagccgggttatgaacatggcagcacccaaggcccacagaccgggaggagag
ctggtgcacctgcccccgtacctacgaatggacttcctgttaaaccgtggctctgcatcg
ggaggccgggggtccaatggtggtaacggaggaagagaaggaggaggaggggagacaggg
gcgttgggccaggcgtgtttggagccccagaagagccgcacactgaaacggcccccgctc
ctggaacccacacccatggaggtgcccacatccagggaggtgcagcagtggcagccaggg
actgcctccaccctgccccagcgtgagcccactggccgtgaggccaccggagacctggcc
caggccccggctgccaagctcagcagctcacaggagtccctgctagactccagaggacac
ttaaaacagagcaacaacccctacgcaaagtcctacacactggtataa
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