Oncorhynchus gorbuscha (pink salmon): 124005798
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Entry
124005798 CDS
T07892
Symbol
chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1 isoform X1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ogo01006
]
124005798 (chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124005798 (chm)
Prenyltransferases [BR:
ogo01006
]
Protein prenylation
Rab geranylgeranyltransferase
124005798 (chm)
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124005798 (chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
124005798 (chm)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
124005798
NCBI-ProteinID:
XP_046171312
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All DBs
Position
LG02:complement(61074769..61109712)
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AA seq
671 aa
AA seq
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MAADNLPSEFDVIILGTGLSESVIAAACSRVGQRVLHVDRRNYYAGNWASFTFNGLLSWI
EEYKQAGQSEEAVREDWKEKLEEGEEALALSSMDTSISNLEVFCYASEEPEEEEVAEAAA
AAWSVPQTPDSEGEVERCLLESSSVEEEEPVVASDEASPASGPDAGAEQTQPEGPSQAEE
TQGEAQQASPSPAERQPEPKKKITYTKIVKEGRRFNIDLVSKLMFSRGSLVDLLIKSNVS
RYAEFKNVTRILTYRNGKVEQVPCSRADVFGSKQLTVVEKRMLMKFLTFCLDFEQHPEEY
QDFSEYSFWDFLQTKKLTENLQHFILHSIAMVIPEVGTVEGLRATQHFLRCLGRYGNTPF
LFPLYGLGEIPQCFCRMCAVFGGIYCLRHSVQCLVLDKESGKCKAVIDTHGQRISCSHFV
VEDGYIGADQRKNTDSRQISRAVLITDRSILPSDSEQQISLVTVPPVEPGGPLVRIIELC
SSTMTCMLDTYLVHLTCSSASGSAREDLAPVVSRLFHTPASPGEEPAEGEEESRGPTVLW
ALYFNMRDTSAVDRSSYDLPSNVHVCASPDTALGSDHSIKLAEAVFRQLLPDEEFCPPAP
NPEDIIYDGDGPQGEGPGFEEAAPAEGAGAQGGEGAGRQEGKEAVGETKGAGDSVTPETG
AGDEPSPTSDE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaacctaccatccgaatttgatgttatcatactcgggacaggcctgtct
gagtctgttattgcagccgcatgctcccgtgttggacagagggtcttgcatgttgacagg
agaaactactatgctggaaactgggccagtttcacattcaatggactgctgtcctggatc
gaggagtacaaacaggctggccagagtgaggaggctgtacgggaggactggaaggagaag
ctggaggagggagaggaggccctggcgctcagctcgatggacacgtccatctccaacctg
gaagtgttctgctacgccagtgaggaacctgaggaggaggaggtggctgaggctgcggct
gcagcctggtccgtccctcaaacaccagactcagagggggaggtagagaggtgtctgctc
gagagcagttctgtggaggaggaagagccagtggtggccagtgatgaggcgtctccagcc
tctggacctgatgctggggcagagcagacccaaccggaggggcccagccaggcagaggag
actcagggggaggcgcagcaggccagcccctctccagctgagaggcaaccagagcccaag
aaaaagatcacctataccaagattgttaaggagggacggaggttcaacattgaccttgtg
tctaagcttatgttctctcgtggctcactggtggacctcctcatcaagtccaacgtcagc
cgatacgcagagtttaaaaacgtcacccgcatccttacctaccgtaacgggaaggtggaa
caggtgccctgctccagggctgatgtttttggcagcaagcagctgacagtggtggagaaa
aggatgctgatgaagttcctcaccttttgcctggactttgagcagcacccagaggagtac
caggacttctcggagtattcattctgggacttcctgcagaccaagaagctgacggagaac
ctgcagcatttcattcttcactccattgccatggtgatcccggaggtgggcacggtggaa
ggcctgagagccacgcagcacttcctgcgttgtctggggcgctacggcaacacgcctttc
ctgttccccctctacggcctgggggagatccctcagtgcttctgcaggatgtgtgctgtc
tttggagggatctattgccttcgccactcagttcagtgtctggttctggacaaggagtcc
ggcaagtgcaaagctgtgattgacactcatggtcagagaattagctgcagtcactttgtg
gtggaggatggctacatcggggcagaccagaggaagaacacggattccaggcagatatcc
agagcggtcctcatcacagaccggtcaattctgccatcggattctgaacagcagatctcc
ctggtcactgtgcctcccgtggagcctggtggtcccctggtccgtatcatagagctctgc
tcttccaccatgacctgcatgctagacacctatctggtgcacctgacatgttcctctgcc
tctggctccgcccgagaagacctagctcctgtggtgtccaggctcttccacacaccagct
agtcctggagaagaacctgcagaaggagaggaggagagcaggggaccgacggtgctgtgg
gccctgtacttcaacatgagggacacctctgctgtggacaggagcagctatgacctgccc
agtaacgtacatgtgtgtgccagccctgacaccgccctgggcagtgaccactccatcaaa
ctggccgaggcagtgttccgccagcttctccctgacgaggagttctgccccccggccccc
aaccccgaggacatcatctacgatggggatgggccccagggggagggcccgggctttgag
gaggctgcaccagcagagggtgctggtgcccaaggaggagagggcgctgggaggcaggag
ggaaaggaagcagtgggagaaacgaagggggcgggagactccgtaacaccggaaactggg
gctggggatgagccgagccccaccagcgatgaatag
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