Oncorhynchus gorbuscha (pink salmon): 124005800
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Entry
124005800 CDS
T07892
Name
(RefSeq) 5'-3' exonuclease PLD3-like
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00564
Glycerophospholipid metabolism
ogo00565
Ether lipid metabolism
ogo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
124005800
00565 Ether lipid metabolism
124005800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124005800
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
124005800
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
124005800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
CBM_21
Motif
Other DBs
NCBI-GeneID:
124005800
NCBI-ProteinID:
XP_046171314
LinkDB
All DBs
Position
LG19:complement(37895939..37903003)
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AA seq
485 aa
AA seq
DB search
MISDIPYEKMCDVESRREESCRKGQMYYRCLLGLTGVATLLLAALFLQTLLLPVVNSSPN
KPGFKLPLPLADTCTDPCKIVLLESIPEGLEFNTSVTNPSIYQAWLNLISEARSSVDIAS
FYWTLTNKDTGTHEPTANQGEDVLNRLVQVSRKLSVRIAVNTPTESQPQEDINLLKSSGA
DVRAVNMRDLTTGVLHTKFWVVDNKHIYIGSANMDWRSLTQVKELGAVVYNCSCLAADLE
KIFEAYWYLGQKDTPIPSPWPSSFNTPYNKDTPLQLPLNGTASSVYLSSSPPSFCAAGRT
RDLQSILSVIEDAREFVYIAVMNYLPTMEFSQPKRYWAEIDTQIRRVAYEKRVKVRLLIS
CWASTSPVMIPFLKALDSMQEPKAKLDVQVKLFIVPANPKQKEIPFARVNHNKYMVTDKV
AYIGTSNWSGDYFVNTAGSALVVNQTAAQSVEPTVQAQLQAVFERDWDSAYSTPIHQHAD
LKMVC
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgatattccatatgagaagatgtgtgatgtggagtccaggagagaagagtcc
tgcaggaaaggacagatgtattataggtgtctgctgggtctcactggagtggccactctg
ctattggctgccctgttcctccagaccctgctgcttcccgtggttaactcctccccaaac
aagcccggcttcaagctcccacttcctctcgctgacacctgcaccgacccctgcaaaatc
gttctgttggagagcatcccagaggggttagagttcaacactagtgtcaccaacccatcc
atctaccaggcttggctcaacctgattagtgaggctcgcagtagcgtggacattgcgtct
ttttattggacgctcaccaacaaagatacaggcactcacgagccaacagcgaatcagggt
gaggatgtcctgaataggctagttcaggtgtctcggaagctctctgttcgcatcgctgta
aatacaccaacagagtcccaacctcaggaagacatcaatctcttaaaaagttctggtgct
gatgtaagagccgtgaacatgcgggatttgaccactggagtacttcacacaaagttctgg
gtggtagacaacaagcacatttatattggcagtgccaacatggactggaggtcccttacc
caggtgaaggagctgggggctgtggtgtacaactgcagctgcttggctgcagacctggag
aagatcttcgaggcctactggtaccttgggcaaaaagatacacccatcccgtcaccttgg
cccagcagtttcaacactccttacaataaggacacgcccctgcagctgccactcaacggc
acagcctccagcgtctatctgtcgagctctccaccatctttctgtgctgccgggagaacc
agagacctgcagtctattctcagtgtgattgaggacgcacgggagtttgtctacatcgct
gtcatgaactacttgcccaccatggagttttcacaacccaaacgttactgggcagaaatt
gacactcagatcagacgtgtggcatacgagaagcgggtgaaggtgcgtctgctcatcagt
tgttgggcgagcacttcgcctgtcatgatccccttcctgaaagccttggattcaatgcag
gaacccaaggccaagctggatgtccaggtgaaactctttattgtgccagccaatccaaag
cagaaagaaatcccctttgccagagtcaaccacaacaagtacatggtgacagacaaggtt
gcctacataggtacctctaactggtctggagactattttgtgaacactgctggatcggct
ttggtggtgaaccaaacggctgcccagtcagtggagcctacggtccaggcacaactacag
gccgtgttcgaaagggactgggactccgcctacagcaccccaatccaccagcacgccgac
ctcaaaatggtgtgttag
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