Oncorhynchus gorbuscha (pink salmon): 124005837
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Entry
124005837 CDS
T07892
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124005837
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124005837
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_9
LRR_14
Ig_2
V-set
LRRNT
LRR_Zer-1
Ig_VEGFR-1-like_5th
Ig_5
Motif
Other DBs
NCBI-GeneID:
124005837
NCBI-ProteinID:
XP_046171402
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Position
LG19:19815046..19836090
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AA seq
613 aa
AA seq
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MFVESVVRWGAWSILLQCGLLGVSAGDFPWPCPARCVCRLETLEVNCSDKQLTSVSEGFA
SGTQRINLSRNKLKTLGRRQFFGMTQLEDLDISDNLIAMIEVEAFQGLQNLKTLCIRSNR
LKIISVGVFSGLPSLRFLDLSENEILVFLDFTFRELVSLHQLEAGENDLVFISQRAFTGL
QNLQELNLDRSNLTSIPTEALSQLQSLTRLRMIRLTISALPNNAFRRLHRLRSLVISHWP
LLDKLASNSLIGLNLTSLVISSCNLSAVPYQALRHLVYLGYLDLSYNPITAIQGNLLGDL
LRLQELHLAGGNLLRIEPGAFRGLAYFRLLNVTSNQLSTLEDSAFHSVGNLQVLRLDGNP
LACDCRLLWVVRRRQRLNFDGRQPTCSTPDMVREREFRDFSEKELPRLFTCRQARIVDRR
SQEVRVEEGTTVLFSCKADGDPMPSFTWLSAQRIPLSTTGRIRVLSNGTLEVRYAQVQDS
GTYQCTAGNAAGNDSLYVSLYVKGFPRNRTMPFFNDEGWIESSHAPTANSSAQVANQYPF
DAKTLIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDYVPRTSMGVGGGGGGG
GGGDAGKFTMKLI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtctgttgtcagatggggggcatggagcatcttgctccagtgtggatta
ttgggcgtgtcagcaggggacttcccctggccttgccctgccaggtgtgtgtgtcggctt
gagactttagaagttaactgctctgacaagcagctgacttctgtgtctgagggcttcgct
agtggcacccagcgcatcaacttatctcgtaacaagctgaagacgctgggtcgtcgccag
ttctttggcatgacccagcttgaggatctggacattagtgacaatctcattgccatgatt
gaagtggaggctttccagggcctgcagaacctcaagaccctgtgcattaggagcaaccgc
ctcaagatcatctctgtgggggtcttctccggactgcccagcctgcgcttcctggacctg
agtgagaacgagatcctggtctttctggactttactttccgtgagttggtgagcctccac
cagctggaggctggggagaatgacctggtgttcatctcccagcgggcctttaccggcctg
cagaacctgcaggagctcaatttggaccgcagcaacctgacctccatccccaccgaggca
ctatcccagctccagagcctgactcggctgcgcatgatccgcctcaccatctcggcgctg
cccaacaatgccttccgccgcctgcatcggctgcgtagcctcgtcatctcccactggccc
ttgctggacaagctggccagcaacagcctgattggcctcaacctcacctcgctggtcatc
agcagctgcaatctcagtgctgtcccataccaggcactgcgccacctggtctacctgggc
tacctggacctgtcctacaaccccatcacagccatccagggtaacctgctgggggacctg
ttgcggctgcaggaactgcacctggctgggggaaacctgctccgcattgagccaggggcc
ttcagggggctggcttacttccgtctgctcaacgtgacatccaaccagctcagcacactg
gaggacagtgccttccactcggtggggaatctgcaggtcctgcggctggatgggaacccc
ctggcctgcgactgccgactactctgggtggtccgccggcgacagcgcctgaactttgac
ggtcgccaacccacctgctccaccccggacatggtgcgagagcgggaattccgggacttc
tcagagaaagagcttccgagactgttcacctgccggcaggcccgcattgtagaccgcagg
tcccaggaggtcagggtggaggagggcactacggtgctcttctcgtgcaaggcagatggt
gacccaatgccctcctttacctggttatcagcccagcggattccgctctccactacgggg
cgcatcagggtgttgtccaatgggactctagaggtacgctacgcccaggttcaggacagc
ggcacataccagtgcacggcgggcaacgcagctggcaacgacagcctgtacgtcagcctc
tatgtgaagggtttcccacgtaaccgcaccatgccatttttcaacgacgaaggctggata
gagtcctcacatgcccctactgccaactcctctgcccaggtggccaaccagtacccgttt
gatgccaagacactgatcattgccaccaccatgggcttcctgtccttcctcagctcagtg
gctatctgcttcgtcttcatgttcttctggagccagagcaaggggcaaatcaaacacaca
gccaccatcgactatgtgccccgtacctcaatgggggtaggaggaggaggagggggaggg
ggtggaggggatgctggcaagttcaccatgaagcttatctaa
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