Oncorhynchus gorbuscha (pink salmon): 124005867
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Entry
124005867 CDS
T07892
Name
(RefSeq) neuronal PAS domain-containing protein 1-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124005867
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124005867
BRITE hierarchy
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
124005867
NCBI-ProteinID:
XP_046171449
LinkDB
All DBs
Position
LG19:35447962..35507620
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AA seq
778 aa
AA seq
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MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWCPLLEGENHCSKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSSEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHVAPESASSSASTSSLAGTPEPAPSSPLSPGNEPPDRGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPAMVPGSARSVRRPMGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQVTYCENRISEYMDLSPAEVVGHTCYHFIHVEDLDNIRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWVQSCATVSINHKAPHERNVIWVNYVISRTELPDTPL
DLLQLPESLRAERLKASSSPSEHSPQTRGPQPMKRSVCKGDPDSKLREIYNPGVQSGDRR
KRPLRSDSEGAPAETRRRLEVFRQRERSVSASSDLGSESGGEEREWEHGGDSASVKREEG
PSKRGEETPMRGGGAHNGRAVIQHLKSVVSSPLSGRPNIKTEHEALIAGGRWTHTHTSSH
IQPLPSHAHTPCGSLNGDSPLTPIPDSSSSSEAPPNGIFTPPSPSMSPPMSGSSPLPCEE
RGMLSGGRGGGPDFELLHRLAAGGAAGRVLFHPLALGPQGPQSLYAPSTIRYAPPELPHS
HLGAEGLRSDHHKGPPAFFPHLQRLAGLPSFSGFSASDNPFNPFCVNGLRGAAGSEED
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatgccgttcgtcagcgagggaaagtgtgtgagcgtggaatgggacttccta
cagggactactagccaaaccccccaccctgccctgtttgcagaacctgcggaaggagaag
tctcgtaatgccgctcgttcccgtcgcggcaaggagaactttgagttctttgagctggcc
aagatgctccctctccccggggccatcaccagccagctggacaaggcctcggtcatccgc
ctcaccatcagctacttgcacatgcgcaccttcgccagccagggagacccgccctggtgc
cccctgctggaaggagagaaccactgcagcaaagtgcgacgctcctcccactctctggcc
actgacatgttcgaacagcacctgggagcacacttgttacagtccctggacggctttgtg
tttgtggtaagctcagagggacgcttcctctacatatcagagactgtttccatctacctg
ggcctctcacaggtggagttgacgggcagcagtgtgtttgactacatccacccagcggac
catgtggagatggcagagcgtctgggcatcaggccccacctgagggccgaggctggctgc
cacgtggcccccgagagcgcttccagctctgcctccacatcctccctggccgggaccccc
gagcctgccccctcaagccccctctctcctgggaatgaacctcctgaccgaggcttcttt
atccgtatgaagtccaccctcaccaagagaggcctccacgtcaagtcctcgggctacaag
gtgatccatgtgaccgggcgaatccgctgtcgccctgccatggtgccaggctccgcccgc
tcggtgcgtcggccaatgggcttggtggcccttgcgcacacgctcccgccctccacgctg
aacgaggtgcgcatggagagccagatgtttgtcttccgggtcaacatggatttgcaggtc
acctactgcgagaacaggatctcagagtacatggacctgagcccggcagaggtggtggga
cacacctgctaccacttcatccacgtggaagacctggataacatcagacagagccatgag
gacttgttgaggaagggtcaggtggtgaccgggtactaccgctggctccagaggagaggg
ggttatctgtgggtccagtcctgtgccaccgtctccatcaaccacaaagccccacacgaa
cgcaacgtcatctgggtcaactacgtcatcagtcggacagagctcccggacactcccctg
gatctgctgcagctcccagagagtctgagggcggagcgtctgaaagccagctcctcccct
tctgaacactcaccacaaacccggggcccacagccaatgaaacgctctgtgtgtaaaggt
gaccctgactcgaaactgagagagatctataatcccggtgtccaatcaggggacaggagg
aaacgtccgctgcggtctgactctgagggtgctcccgcggaaacgcggcgtcgcctggaa
gtgttccgccagagagagcggagtgtgtcagcctcctcagacctgggcagcgagagcggg
ggagaggagagagagtgggagcatgggggagacagcgcgagtgtcaaacgagaggagggg
ccttcgaaacgaggcgaggagacccccatgaggggcggcggggcgcacaacggccgtgcg
gtaatccagcacctgaagagtgtagtgtcctcgcctctctctggccgccccaacatcaag
actgaacatgaggcactgatcgcagggggtcgctggacacacacacacacctcctcacac
atacaacccctaccctcacacgcacacacaccctgcggcagcctgaacggcgacagtccc
ctcacccctatcccggactcctcctccagcagtgaagccccacccaatggtattttcacc
ccgccctccccctccatgtctcctccgatgtccggctcctcccctctaccctgtgaggag
cggggaatgttgtctggaggcagggggggcgggccggactttgagctgttgcatagactg
gcagcggggggtgctgcaggacgggtgttgtttcaccccctggccctcggcccccagggg
ccacagagcctgtacgcccccagtaccatccgctatgcacccccagagctgccccactcc
caccttggtgctgaggggctgcgctccgaccaccacaagggccccccagccttcttcccc
cacctccagaggctggccggcctgccctccttcagtgggttctccgcctcagacaatccc
ttcaaccccttctgtgtgaacggactgaggggggccgcggggtccgaggaggactga
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