Oncorhynchus gorbuscha (pink salmon): 124005871
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Entry
124005871 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1-like
KO
K03260
translation initiation factor 4G
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124005871
03012 Translation factors [BR:
ogo03012
]
124005871
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124005871
mRNA cycle factors
Stress granule specific factors
124005871
Translation factors [BR:
ogo03012
]
Eukaryotic type
Initiation factors
eIF-4
124005871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
Motif
Other DBs
NCBI-GeneID:
124005871
NCBI-ProteinID:
XP_046171457
LinkDB
All DBs
Position
LG19:complement(59731741..59787590)
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AA seq
1673 aa
AA seq
DB search
MNKAPQSITRPHPALSPGLQLPTFPPGQPPSVVFATPPPQMNPAPQPRQFAPVPRALHQQ
PYYSRSSLHSNAPRVPPSSTPRPVAPTHVYQPGQQMMMIPSQRIPFPNQQGPAYFIPGQY
RSTYVAPPQQYPVPPGTPGFYPGTSPAEYGTYAGAYYPAQQQYTSSLPAAPVIMNPPPQQ
QQLPPQKQIQPKRERKQITIRDPNQGGRDITEEIMSGGTRSGTTPTPPQVSDDSSESSGS
EGPAVAQANGENVTPVMVRPDDRRKPAATLITGPPALSKTPELVKTAPTEVKLPDTDSKS
PSLPQDLPTPPRVTTTLHTTAPGTPPSTSPIADMMDAPAPAAAPALSAPKVPAYPAPLPE
PRPTPAAVEQPSATKEAREEVKEKEIKEVTEAREVTTSSKPEPSLAPVTNPSSSTNSVSA
TQPLPEEEPVALSITMPSLQAAEPLLESPIAQQEELRLPNGLPLPSSQEPEKVSAELSEC
DLSPIAEPEVAPLQREAPTHVAATAKPDPVVQAAVAPVVLAETAITTEVTPRQIEDEMDS
PPSQRTIPPGENSMQAAVSVPKKKRKMKDLNRKEAVGDLLDAFKEEQVVQSPPEQATPTS
ASDTEEPRPSTTPAVAEVGETWEEKEDKLDAENIEPKPGDLKYQYKEELCRLIDPEEKKR
YDRDFLLGFQFNSAAMSKPEGLPQINDVVLDKANKAPLRQLDPSRLPGMNMGTDFTPSFA
NLGRPGMGGGGGHRGPPSGMGGGGPRRSQQGQRKEPRRIINISSSLTDDVKLNKAEDAWK
PAVKKAASGQAAPEEESDNPEQTKTHELFKRVRSILNKLTPQMFQQLMKQVKELTIDTEE
RLKGVIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTTDKPGVTVNFRKLLLNRCQKEFE
KDKDDDVIFEKKQEELDAAAMEEKDRLKAELEEAKDIARRRSLGNIKFIGELFKLKMLTE
AIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFVQMDKIIKEKKTSS
RIRFMLQDVLDLRRNTWVPRRGDQGPKTIDQIHKEAELEEHREVLKVQQQLLNQNTRGGR
GGGGGRDQGNRGGQHPQSGQRSQPQDEGWNTVPISTKSRPIDTSRLSKITKPGALDFNNQ
LLAPQLGGKGMWGSWGKGSSGGTTGAKPAGEATPESGGRPATSTLNRFSALQPQQPSSSG
SSQDSDRRVPLRNSSSRDRGSDKFERLDRGSNDRFGRRDDRNPLTKRSFSRETEEHSREK
EHRGPSDPIRRVASMTDDRGTRDRARSKENVKREAAATPPAQTKPSLREDELEKKATAII
EEYLHINDMKEALQCVVEMNSTRLLFVFVRSGLESTLERSPIARERTGLLLHQLYKAGTL
PTEQYYRGLQEILEVAEDMAIDIPHIWLYLAELITPMLHEGGIPMGPLFKEISKPLVPQG
TAGVLLAQILTLLCRGMSHKKAGAMWREAGLSWKDFLPEDEDVNKFVTEKNVEFTLGGGG
GDDEKSSKKKLSSEELNKQLDRLIQDKADNQRLCDWVEANLDETQISSNVFVRAVMTAIC
QSAILCENPYKLDAKVITRRAKLLHKYLKDEQKELQALYALQALMVEMEQPANLLRMFFD
TLYDEDVIKEEAFYKWESSKDPAEMQGKGVALKSVTAFFTWLREAEDEESDNS
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagtctataacgcgaccccaccctgccctctcccctggactccag
ctacccaccttccctcctggacagcccccctctgttgtctttgccaccccacctccacaa
atgaacccagcgccacagccccgacagttcgcccccgtgccccgtgctttacaccaacag
ccgtactacagccgttccagtctgcacagcaatgcccccagggtgccccccagcagcacg
ccgaggcctgtggcgcccactcacgtctaccagccgggccaacagatgatgatgatcccc
tcacagcggatccccttccccaaccaacaaggccccgcctacttcatacccggacagtac
cggtcaacgtacgtggcccccccccagcagtacccggtcccgccgggcaccccaggcttc
tacccaggcaccagcccagctgaatatggtacttatgcaggggcatactacccggcccaa
cagcagtacacgtcctccttgccggctgctccggttatcatgaaccctcccccccagcag
cagcaactacctccacagaaacagatccagcccaaaagggagcgcaaacagatcacaata
cgagaccctaaccagggtggtagagacatcactgaggagattatgtcagggggcactcgc
agtggcaccacccccacacccccacaggtgagcgacgactcttcagagtcatctggatca
gagggcccagctgttgcccaggccaacggtgagaacgtgacacctgtcatggtcagacca
gatgacagaaggaaacctgcagccacactcatcactggccccccagccctgtctaaaacc
cctgaacttgtcaagactgcccctacagaggtcaaactcccagacactgacagtaaatcc
ccttccttaccccaggacctacccacacccccgcgggtaactaccaccctccacactact
gcccctggcaccccaccctcaactagtcccattgcagacatgatggacgcaccagccccg
gccgctgctccagccctatctgcccctaaagtgcctgcttaccctgcacccctacctgaa
ccccgccccactcctgcagctgtggagcagccctcagccaccaaggaggcgcgggaggag
gtgaaggagaaagagattaaagaggtaacggaggctagagaagtgactacatcatctaaa
cctgagccttcccttgctccagtgaccaaccctagcagcagcactaacagtgtgtctgcc
acccagccactcccagaggaggagccagtagccctgtccattaccatgccctccctccag
gcagcagaacccctgctggagtctcccatcgcccagcaagaggagctccgtctgcccaac
ggcttgccgctccccagctcccaggaacctgagaaggtttctgcagagttgtctgagtgt
gacctcagccccatcgctgagcctgaggtggccccattacagagggaggcacccacgcat
gtcgccgccacggcaaagcccgaccccgtcgtccaggcggccgttgcccccgtggtccta
gctgagactgctattactacagaggtaacccctcgccaaattgaagacgagatggactct
ccaccatcacagcgcaccatcccacccggggagaattctatgcaagctgccgtttctgtg
cctaagaagaagaggaagatgaaggatctgaacaggaaggaggctgttggagacctcctg
gatgcctttaaggaggagcaggtagtgcagagcccgccagagcaggccacacccacttct
gcctctgacacagaggagccccgcccatccaccacccctgccgttgcagaggtaggtgag
acgtgggaggagaaggaggacaaactggatgcagagaacattgaacccaagcccggggat
ctgaagtaccagtacaaagaggaactatgtaggcttatagacccagaggagaagaagagg
tatgacagggacttcctgctgggcttccagttcaacagtgctgccatgtccaagcctgag
ggcctgcctcagatcaatgatgtggtgctggacaaggcgaataaggcccctctccgccag
ttggaccccagccgtttgccggggatgaacatgggcactgacttcacgccctcatttgcc
aacctgggcaggcctggaatggggggaggaggtggacacagaggaccaccctctggtatg
ggtggtggaggaccgcgtcgctcccaacagggtcagcgtaaggagcccaggaggatcatc
aacatctcttcgtctctgacggacgacgtgaaactcaacaaggctgaggatgcctggaag
cccgctgtcaagaaagctgccagtgggcaagcggctcctgaggaggagagcgacaaccca
gaacagaccaagacccatgagctgtttaagagggtccgtagtatcctgaacaagctgacc
cctcagatgttccaacagctgatgaagcaggtcaaggagctgaccatcgatacagaggag
aggctgaagggagtgatagatctgatctttgagaaggccatttctgaacccaacttctcc
gtggcctatgccaacatgtgccgctgccttatggggctcaaagtccccactacagacaag
ccgggagtcactgtgaatttccgcaagctgcttctgaaccgttgtcagaaggagtttgag
aaggacaaggacgatgatgtcatctttgagaaaaagcaagaagagctggacgctgcagcc
atggaggagaaggatcgcctgaaggcggagttggaggaggccaaagacattgcacggcgg
cggtcgctaggcaacataaagttcatcggtgagctgttcaagctcaagatgctgacggag
gccatcatgcacgactgcatcgtcaagctgctgaagaaccacgatgaggagtcactagag
tgcctctgtagactcttgtcaactataggcaaggacctggactttgaaaaggcgaagcct
cgtatggaccagtacttcgtccagatggacaagatcataaaggagaagaagacatcttcc
agaatccgcttcatgctgcaggacgtactggacctcaggaggaatacgtgggtccccagg
agaggagatcagggccccaagaccatagaccagatccacaaggaggcagagctggaggag
cacagggaggttctcaaggtgcagcagcaactcctcaaccagaacacccgaggaggacgt
ggtggtggaggaggtagagatcaggggaaccgcggaggccaacacccccagtcgggccag
aggagtcagccccaggacgagggctggaacaccgttcccatctcaaccaagagcagaccc
atcgacaccagccgactcagcaagatcactaagcctggggctttggacttcaacaaccag
ctgctggcgccccagctcgggggtaagggcatgtggggcagttggggcaagggcagcagt
ggtggcaccaccggagccaaacccgccggggaagccaccccagagtcaggaggccgccca
gccaccagcacccttaacaggttctcagccctgcagccacagcagccctcctcctcaggt
tcctcacaggactcggacagaagagttcctctaaggaacagctcgagccgggaccgtggc
agtgacaaatttgagcgtcttgaccgtggcagcaacgaccgctttggccggcgggacgac
aggaacccgctcaccaagcggagctttagtagggagactgaggagcacagcagagagaag
gagcaccgcggcccttctgatcccatacgccgcgttgccagcatgaccgacgaccggggc
accagagaccgagctaggagcaaagagaatgtgaagagggaagctgctgcaacacctcct
gcccagaccaaaccttccttgagggaagacgagctggagaagaaggccacagctatcata
gaggagtacctacacatcaacgacatgaaggaggcgctgcagtgtgtagtggagatgaac
agcacccggctgctctttgtgtttgtacggagcggtctggagtctactctggagcgcagc
cccatcgccagagaacgcaccggcctgctactgcaccagctgtacaaggcaggcaccctg
cccacagagcagtactacagagggcttcaggagatactggaggtggcggaggacatggcc
atagacatcccccacatctggctctacctggctgagctcatcacacctatgctccatgaa
ggaggcatccccatgggaccgctcttcaaggagatatccaagcccctggttcctcagggg
acggctggagttctgctggcccagatcctcaccctactctgcagaggaatgagccataaa
aaggcaggtgccatgtggagggaggcggggcttagctggaaagactttctgcctgaggac
gaggacgtcaacaagtttgtgacagaaaaaaatgtggagttcaccctgggaggaggagga
ggagatgatgagaagagcagtaagaaaaagctgagctcagaggagctgaacaaacagctg
gatagactcatacaggacaaggctgacaaccagaggctctgcgattgggtcgaggctaac
ctggacgagacacagatatcctccaacgtgtttgtcagagcagtcatgacagccatctgc
cagtcggccatcctgtgtgagaacccttacaagttggatgcgaaggtgatcacccggagg
gccaagctgctccacaagtacctgaaggatgagcagaaggagctgcaggctctctacgcc
ttgcaggccctcatggtggagatggagcagcctgccaacctgctgcggatgttctttgac
acgctgtacgatgaagatgtgatcaaagaggaggccttctacaagtgggagtccagcaag
gaccccgctgagatgcagggcaagggtgtggccctgaagtcagtcactgccttctttacc
tggctccgtgaggccgaggacgaggagtctgacaacagctag
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