Oncorhynchus gorbuscha (pink salmon): 124005944
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Entry
124005944 CDS
T07892
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04020
Calcium signaling pathway
ogo04080
Neuroactive ligand-receptor interaction
ogo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124005944
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124005944
04082 Neuroactive ligand signaling
124005944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124005944
Ion channels [BR:
ogo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124005944
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
124005944
NCBI-ProteinID:
XP_046171546
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All DBs
Position
LG19:5430348..5620494
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AA seq
1655 aa
AA seq
DB search
MNFNIAVIHAGASVQVEAAAGPGGRVLYPGFGRAHSSLGESVITQWGSANVIWLQVNDSS
PKTLLSQLCDLLAARPLQGLVYEEERPPPTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLG
RMQQESGSIFLQFSSSTSLQLEVIFKILEEYDWTTFSVVSTRHHGYQDFLSVVDGLTDGS
FIGWEKKSVVMLNVTDDPGGARTRRLLKENEAQVRLLYCSQEEAELVFKAAWAAGQAGPS
HMWFAVGPALSGLGMEGLPRALFAVRPQGWKDKPRMRIARGVSILTHGAVALRRDYGASG
GPNFVTNCMTEANQTHRVRGRMRYFSNITLGGRDYSFDSDGYLANPVLEVISYTPGKGWE
DVGMWENGKLDLVYPAWSRYGPFLQPPDGAQHLRVVTLEERPFVIVELADAASNTCIRDS
VPCRRPLNASIPVQDPPKKQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWN
GMIGEVVGQRADMAIGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYS
PAVWVMMFVMCLTVVAVTVFIFEFFSPVGYNRSLSSGKKAGGSTFTIGKSVWLLWAIVFN
NSVPVENPRGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPT
EQYPPLKFGTVPNGSTEKNIRSNYPGMHHYMVKYNQRGVEDAINNLKTGKLDAFIYDAAV
LNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERL
WLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCMATSSG
RLDFLLAISRGMYSCCSFEDETTPGGAKSSMAMLPHHHGTMVTVPPPPHLVGASSTNPAL
TMAQQQQSQPVYKTQMPGSPPTVVHSGTALGPSNTPMLGAPLPCSTFLPRPDRRLAVVDR
WRLPKAGTATNPMAVRGAIADMGPFPQKVAPTWGTTAGGVGVGGGGGGGGGGLDGYKRYY
GPIDPEGLGPCMDQPAGSQTPKTAPRSHPQPPPTTVAFYSEKGPDQGVGKRVVGGGGAGC
QGKGGVKPLGTPRLPPKSQAVGVTPVPLPTNPPLPQPSPPLPSSFWRKRRPKKPKEPGGP
LYENILPLGRRGGGRDGARDGGGRRGRPLSPPLPLSVTVPMSPNYTPPSPSTSLPYTSST
SSSSSNTSSTSSSTSSSRSSSPSSSSSLTSQSTREGLDAEEDDEDEELTEESSLLLGRGR
DRQRSIISSRSLSHGRQPPPIPPRKPRPARGERDRERERGGSQLAQLQEWWAGWGERERD
RSGGGDDERKREKKRRKDKEKKKKKKKRKKREERERERDKERKRRKVKKKRKKKALKTKK
RKKSSGRSEQEEGDVEADREGVGDGGREGGHTAMGREEARPCPTARRSCSPHCHSFSGGS
RPKPPPKPDQGQAKSGSQPVLSSCTRDYGQFLSPGASTPPTCHSRPRAYAPDEAPPISPA
WRARYDRGETREGDTRADTGAAETTDAMATVTKGGAKVTGDATATGTAVMATTNDHQLVT
IATETTRDDCTMAVSAVGDSETIVTRSLVRVLVRATVRRHTRVTYIRLEGSHDNESEGEA
MSSEAIAAPELLLRSELSFVMSSSVLLSSPSQNNG
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaacatcgctgtgatccacgcgggggccagcgtgcaggtagaggcggcggcc
gggcccgggggaagggtgctctaccctgggtttggtcgggcacacagctccctgggggag
agcgtgatcacccagtggggctctgctaacgtcatctggctccaggtgaatgacagtagt
cctaagactctgctgtcccagctgtgtgacctgctggcagcgaggcccctacagggcctg
gtctacgaggaggagaggccaccacccaccgcctggggacccctggcccccatgttagag
tttgtctctgcccagactggactacccatagtggctgtaggaggaggagcagggctgggg
aggatgcaacaggagtcaggctccatcttcctccagttcagctcatccaccagcctccag
ctggaggtcatcttcaaaatactagaggagtacgactggaccaccttctcagtggtgtcc
acccgtcaccatggctaccaggacttcctgtcggtggtggacggcctgacggacggctcg
ttcatcggctgggagaagaagagcgtggtcatgctgaacgtgacggacgacccgggaggg
gcacgtacgcgcaggctgctcaaggagaacgaggcgcaggtacgtctgctctactgttcc
caggaggaggccgagctggtgtttaaagcagcctgggccgcgggtcaggctggaccctct
cacatgtggttcgctgtggggccagccctgtccggccttggcatggagggtctccccagg
gccctgttcgccgtgcgtccgcagggctggaaggacaagccccgcatgaggatcgcccgg
ggcgtgtccatactgacccatggggcggtggcactgcgccgcgactatggggcctctgga
gggccaaactttgtcaccaactgcatgacggaagccaatcaaacacacagggtgcggggg
aggatgaggtatttcagcaacatcacgttgggtggcagagactactctttcgacagtgat
ggttacctggccaaccccgtcctagaagtcatctcctatacacctggcaaaggctgggaa
gatgtagggatgtgggagaacggcaagttggatttggtttatccagcgtggtcgcgttac
ggtccattcctccaaccgcctgatggcgcccagcacctgcgcgtggtcactctggaggaa
cgtccatttgtcatcgtggagctggctgacgccgcctccaacacctgcatcagagactct
gtaccctgccgacgacccctcaacgccagtattcctgtccaggatcccccaaagaaacag
tgctgcaagggcttctgcatcgacatcctcaaacgattggccaaaatcgtgggtttcacc
tatgacctctacctggtgaccaatggaaagcacgggaagaagattgatggagtgtggaac
ggcatgattggagaggtggtgggacagcgagcagatatggccatcggatccctcaccatc
aacgaggagaggtcagaggtcgtggacttctccgtccccttcgtggagacgggcatcagc
gtcatggtctcccgtagcaacggaaccgtctcaccctctgccttcctggagccctacagc
ccagcggtgtgggtgatgatgttcgtcatgtgcctgaccgtggtggctgtgaccgtcttc
atatttgagttcttcagtccagtcggctacaaccgcagcctttccagcggaaagaaggca
ggaggctctacgttcaccataggaaagtctgtgtggttgctgtgggccattgtgttcaat
aactcggtcccagtggagaaccccagaggaaccaccagtaagatcatggtgctgatctgg
gccttcttcgctgtcatcttcctggcttcctacacagccaacctggctgccttcatgatc
caggaggagtacatagacactgtctctggactctcagacaaaaagttccagcaccccaca
gagcagtacccccctctgaagtttggcacggtgcccaatggaagtacagagaagaacatc
cgcagtaactaccctggcatgcaccattacatggtcaaatataaccagagaggggtggag
gacgccattaacaacctcaagactgggaagctggatgcctttatctacgatgcagctgtg
ttgaactacatggccaggaaagacgagggttgtaaggtgatgaccataggctctgggaag
gtatttgccaccacaggctacggtatcgccctgcacaagaactcccgctggaaacgcccc
ctcgacctggccctgctgcagctggtgggagacgatgagattgagatgctggagcgtctg
tggctgtctggtatctgtcacaatgataagattgaggtgatgagcagtaagctggacata
gacaacatggcaggtgtcttctacatgctgctggtggctatggggctcagtctgctggta
tttgcttgggagcacctggtctactggaggctcagacactgcatggctaccagctccggg
agactggacttcctactggccatcagtaggggcatgtacagttgttgtagctttgaggat
gaaaccacgccgggtggggccaaatcctccatggctatgctcccccaccatcatggtacc
atggtaacagtcccgcccccgccacacttggtcggtgcgtcgtcaaccaacccggccctg
accatggcgcagcagcaacagtcacaacccgtctacaaaacacagatgcctggatcccct
cccaccgtggtgcattctgggacggcgctggggccctccaacactcccatgctaggggcg
cccctgccctgctccacattcctcccccggcccgatcgcagactggccgtggtggaccgc
tggaggttgcccaaggccgggaccgccaccaaccccatggccgtccgcggggccatcgca
gacatggggcccttcccccagaaagtggctccaacctggggcacgacagctggaggagtg
ggggttggtggtggtggtggtggtggtggtggggggctggatggatataaacgctactat
ggacccatcgaccctgagggtctggggccctgtatggaccagcctgcagggtcccagacc
cccaaaacagcccccaggagccaccctcaaccccctcccaccactgtggccttctactca
gagaaaggtcctgaccagggggtggggaagagggtggtgggaggtggtggtgctgggtgt
caggggaagggaggggtcaaacctttggggacgcctcgactgcctcctaaaagccaagcc
gtgggcgtgaccccagtccctctacccactaaccccccgctgccacaaccctccccccct
ctcccctcatccttttggaggaagcgccggcccaagaagcccaaagagccaggcgggcca
ctgtacgagaacatcctaccgctggggcgcaggggaggaggaagggatggagcgagggat
ggtggagggaggaggggacgccccctctctcctcctctcccactctcagtaaccgtgccc
atgtcccccaactacactcccccttccccctccacctcactcccctacaccagctcaact
tcctcctcttcctctaacacatcgtccacctcttcctctacctcctcctctcgctcctcc
tctccttcctcctcctcctccttgacctctcagagcacgcgagaaggtttggacgcagag
gaggatgatgaggatgaggagctgaccgaggagtccagtcttctcctggggagggggagg
gacagacagcgttcaattatctcctctcgctccctcagtcacgggcgccagccaccacct
atacctccccgaaaaccacgccctgcccgaggggagagagacagggagagggagagagga
ggtagccagttggcccagttacaggagtggtgggcgggctggggtgagagagagagggat
cgcagtggaggaggagatgacgagaggaaacgagagaagaagagaaggaaagataaagag
aagaagaaaaagaagaagaagaggaaaaagagggaggagagggaacgagagagagacaaa
gagaggaagagacggaaggtgaaaaagaagaggaagaagaaggcgctgaagacaaagaag
aggaagaaatcgtctgggcgttctgagcaagaagagggggatgtggaggcagatagggag
ggagtgggggatggagggagagaaggcggtcacacggccatgggaagagaggaagcacgg
ccctgtcccacagccaggaggagctgctccccccactgccacagcttcagcgggggctca
cggcccaaaccccctcccaaaccagaccagggccaggccaagtcaggcagccagccagtg
ctaagctcctgtaccagagactacggtcagttcctcagcccgggcgcttctactcccccc
acctgccactcaaggccaagagcctatgctcccgacgaggctccgcccatttctccagcc
tggagagcgaggtatgacaggggggagacgagagagggagacacgcgagccgacaccggc
gccgctgaaaccaccgacgccatggcaactgttaccaaaggcggtgccaaggtaacaggg
gatgccacggcaactgggactgctgttatggcgactacaaatgaccatcagctagtgacc
atcgctacagaaacaactagggatgactgtaccatggctgtctccgctgtgggtgatagc
gaaaccatagtaacccggtccctggtgcgtgttctggtgagggccacggtgaggcgccac
accagggtcacctacatccgcctggaggggtcccatgacaacgagagtgagggcgaggcc
atgtcgtctgaggcgatagcagctccagaactcctcctccggtcggaactgagctttgtg
atgtcatcgtcggtcctcctctcttcccccagtcagaacaatggataa
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