Oncorhynchus gorbuscha (pink salmon): 124006179
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Entry
124006179 CDS
T07892
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124006179
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
Other
124006179
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
V-set
Ig_VEGFR-1-like_5th
C2-set_2
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Fn3_ROS1
C1-set
V-set_CD47
Ig_6
Interfer-bind
fn3_2
Fn3_VIN3
Ig_MYOM1
Fn3_Dep-1_3rd
Lit
TED6
Motif
Other DBs
NCBI-GeneID:
124006179
NCBI-ProteinID:
XP_046171970
LinkDB
All DBs
Position
LG19:complement(35833504..36040063)
Genome browser
AA seq
2141 aa
AA seq
DB search
MTVPVMGGYGRRDQISVRSSELASLGLGLERSPVSIVTTPARSLAWPNAAPRTRRDCSTF
LRNIPAIYGMWLVTLFLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGG
APHAVLRWYLSTGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNEYFCTAENQAGK
IRSPSIHVKAVFREPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWEKDTVSMVPG
NRFFLTSFGALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDS
FQSGEVQVGRIVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRLTGLTVSDLRLDDSGN
YICEVTNSFGSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCSVQGSPHFTLSWYRN
TEPVLPDQHFSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIV
SSFSERVVVPGEPFSLMCAAKGAPPPTITWTLDDEAVARDPSRVRASQYTLSDGSTVSHV
NVSSPEIRDGGVYRCAARNSAGSAEYQARINVRGSPRIRDMRNITAVAGRNTFINCRVIG
YPYYSIKWYKEGLLLPDNHRQVVYENGTLKLSDVQKVLDEGAYLCSVLIQPQIFISQTVY
VQVKVPPLIQPFDFPPTSIGKLMYIACVVSSGDMPIHITWRKDGQEVAPSSGVNIETKEY
MSSLQIGKVSLKHNGNYTCIASNDAATVSSERQLTVTVPPQFVVQPNNQDGIYGKAGVLN
CSVDGYPPPKVMWKHAKGIGNPQQYHPVPLTGRIQIMGNGSLLIRHVLEEDRGYYLCQAS
NGVGSDISKSMVLTVKIPAMITSHPNTTMAIKGQIKELNCTARGEWPIIIRWERGDTVID
PDRNPRYAITTSPNEKSDEVLSTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPP
DPPELEVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKTDPWELKHATRKISPTNNQAN
IVDLHPAQIYSIRMFSYNKIGHSQASKELTISTEEAQPDGPPVEVFLLPMTSQSIRVTWK
APRKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDNEVYTLDNLKKFAQYGVVVQA
FNRAGTGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRV
VFWSLFPDGEWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTRE
DHPGPPAGIKAVPSSTSSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPAPSEYEANPELL
FYRVTHLNRGQQYLIWAAAVTTAGRGNISDKVTVEPAGKAPAKILSFGGTVTTPWMKEVR
LPCSSVGEPTPTIKWTKDSEDTAIPVTLDGQRLIMANGTLVLRSVKAEDSGYYTCTATNT
LGFDTIIVNLLVQVPPDQPRLTVSTTSSTSITLAWIPGDNGGSSIRGFVLQYSVDNIEGW
RDVFISSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDHPVF
THVNSTHARLNLQGWASGGCPITAVLLEFRPKGNWAWQNVRTNATADVFLAELREATWYE
LKMKACNSAGCGNQSSHFATLDYDGTGTIPPIKSARPEGDDVKKLFSIGCPVILVTLVAA
LLFIIRKKRKEKRLKRLRDAKSLAEMLISSKNNRSFDTPVKGPPQGPRLHIDIPRVQLLI
EDKEGIKQIGEDKATIPVTDTEFSQNVNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGT
NPVSRKSVKSTHSTRNRYSSQWTLTKCQSSTPARTLTSDWRTVGSQHGITVTESDSYSAS
LSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTT
GTNDNADSMTSMSTPSETGLCRFTASPPKPQEYDRGRPTNVAVPIPHRANKSEWTGKSDY
CNLPLYMKTDPFFRKQSELRDPCPVVPPREASIRSLAQRAYHTQGRHMTLDSSKQQQALT
VGHAGLAGLSASGGASGGGGSVGGVTGGPSGGSSTSSLPQRTLTMPGSSSSSAQSAAAAT
DAAAGGDSRDPLLESSSSGPGRLERQKQAAGGAYSKSYTLV
NT seq
6426 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcccggttatgggagggtacgggaggcgggaccagatcagtgtccgttcctcg
gagcttgcgagtctgggactagggctggagagatcgccggtgagcatcgtcaccactcca
gcacggagcctcgcttggccgaacgctgcgccgcgcactcgtcgggattgctcaacattc
ctgagaaatatacctgctatttatggcatgtggctggtaactttattcctgctgtactct
ttacaagaagtgaacagtgaggatgtggtctcgacgcggctgtactttgtaaacgcctcc
ctgcagcgggtgaccttctccagctcggtcggggtgtccctgccctgccccgcgggcggc
gcaccccatgccgtcctgcgctggtacctgtccaccggcgatgacatctacgacgtgccc
cacatccgccacgtgcacgccaacggcaccctccagctctaccctttctcgccatccgcc
ttcaacagctacatccatgacaacgaatacttctgcaccgcagagaaccaggccggcaag
atccgcagccccagcatccacgtcaaagcagtgttcagggagccctatacggtgcgggtg
gcagaccagcgctccatgcggggcaacgtggccgtgttcaagtgcctcattcccaccgca
gtgcaggagtacgtcagcgtggtgtcctgggagaaagacaccgtctccatggtgccaggg
aaccgtttcttcctgacgtcgttcggggccctgtacatatcagaggtccagaaggaagat
gccctgtccacctaccgctgcatcaccaagcacaaatacagtggagagactcgccagagc
aatggagccaggctgtctgttatggaccctacggagtccaccccctcagtgttggacagt
ttccagtccggcgaggtccaagtgggacgtattgtggagctgccctgcatcgcctcgggc
taccccaaccccaccatccgctggctgaaggacgggcgcccgctgcccgccgactcccgc
tggacgcgccgcctcacgggcctgacggtcagcgacctgcgtctggatgacagcggcaac
tacatctgtgaggtcaccaacagcttcggctccaaagaggtgaccggtcacctcaacgtc
atcgagccgttgagagtgactctgtctcccaagaacctgaagacgggcatcagcagcacg
gtgatcctgtcgtgttccgtgcagggttctccccacttcaccctgtcctggtaccgcaac
acagaacccgtcctccccgaccagcacttctccatccagggggcccacaacgagaccctg
ttcatctccgctgcccagaagagacattcgggagcctaccagtgcttcgccacccgcaag
ggccagactgcacaggacttctccatcatactgctggaggatggtacgccccgtatcgtg
tcctccttcagtgagcgtgtggtggtcccgggggaacccttctccctcatgtgcgctgcc
aaaggtgcccctccccccaccatcacctggaccctggatgacgaggctgtggccagggac
ccgtcccgggtgagggccagccagtacacgctgtcggacggctccaccgtgtcccacgtc
aacgtcagcagcccggagatccgcgacggaggggtgtatcgctgcgccgcacgcaactcg
gccggtagcgccgagtaccaagcgcgcataaacgtaagaggttctcccaggatcagggat
atgcgtaacatcacggcggtggctgggaggaacacctttataaactgccgcgtgattggc
tatccctactactcaatcaagtggtacaaggagggacttctgctgcccgacaaccatcgt
caggtggtgtatgagaatggtactctgaagctaagtgacgttcagaaggtcttggacgag
ggtgcgtacctctgcagcgtgctcatccaaccacagatcttcatcagccagaccgtctac
gtccaggtcaaagtgccccctctgatccaaccctttgacttcccccccacctccattggg
aagctcatgtacatcgcctgcgtggtgtcgtctggcgacatgcccatccacatcacctgg
cgtaaggacggccaggaggtcgcgccctcatccggcgtcaacatcgagaccaaggagtac
atgagctcgctgcagatcggcaaggtgtcgctcaagcacaatggcaactacacctgcatc
gctagcaacgacgccgccaccgtcagctctgagaggcagctcactgtcacagtgcctcct
cagtttgtggtccagcccaataaccaggacgggatctatggcaaggcgggggtcctcaac
tgctccgtggacggatacccgcctcccaaagtcatgtggaagcatgccaaaggtataggg
aacccccagcagtaccacccagtgcctctgaccggtcggatccagatcatggggaacggc
tccctgctgattcgtcacgtcctggaggaggaccggggctactacctctgtcaggcctcc
aacggcgtgggctccgacatcagcaagagcatggtcctgacggtcaagatcccggcaatg
atcacgtcgcaccccaacaccaccatggccattaagggccagattaaggagctgaactgc
acagcgaggggggaatggcctatcatcatccgttgggagcgcggtgacacggtcatcgac
cccgaccgtaaccctcgctacgccatcaccaccagccccaacgagaagagtgacgaagta
ttgtctacgctgaagctgaaaccagcagagcgaggtgactcggtcttcttctcctgccat
gccatcaactcatatggggagggccggggcctcatccagctcactgtgcaagagccccca
gaccctccagagttggaggtgagggaggtgaaggatcggagtatgaacctgcgctggacc
cagagatttgacggcaacagcatcatcaccagctacgacattgagtacaagaacaagaca
gatccttgggagttgaagcatgccacccgtaagatctcccccaccaataaccaggccaac
atcgtggatctacaccctgcccaaatctacagcatccgcatgttctcctacaacaagatc
ggacacagtcaagccagcaaggagctcaccatcagcacagaggaagcacagccggatggt
cctcctgtggaggttttcctcctgcctatgacctcgcagagcatccgcgtcacctggaag
gcccccaggaaggagcttcagaacggggtgatccggggctaccagatcggttaccgtgag
aacgggccgggcagtaacggccagtacagcatcgtggagatgaaggccacgggggacaac
gaggtgtacaccctggacaacctgaagaaatttgcccagtatggagtggtggtccaggcc
ttcaacagggctggcaccggcccctccagctctgagatcaacgctaccacactggaagat
gtgcccagtcagccgccccagaacgtgcgggccatctcagtgacatcagacgaggcggta
atcacgtgggcggagcccccacgtctgacgctgcacggcgtgctgaagggctaccgggtg
gtcttctggtccctcttccccgacggagagtggggagagatgcagaacatcacgacaacc
cgggagcaggtggagctgagagggctggagaagttcactaactacagtgtgcaggtgctg
gcctacacccaggctggggacggggtcaggagcaatgtcctgtacatccagacccgcgag
gaccaccctggccccccggctggcatcaaagctgtgccctcttccaccagcagtgtggtg
gtttcctggctacccccgcacaagcccaatggaatcatccgcaagtacaccatctactgc
tccagccccggatcaggccaaccggctcccagtgagtacgaggccaaccccgagctgctg
ttctaccgggtcacccacctgaaccgcggacagcagtacctcatctgggccgccgccgtc
accaccgccggacgggggaacatcagcgacaaggtcactgtggagcctgctgggaaggca
ccagctaagatcctatcgttcggaggtacggtgaccactccctggatgaaggaggtgagg
ctaccctgcagctcagtgggcgaacccacccccaccatcaaatggaccaaagacagtgag
gacacagccatcccggtaactctggacggtcagaggctcatcatggccaatggcacgctg
gtcctacgctcggtgaaagctgaggattctgggtactacacgtgcacggccaccaacacg
ctgggctttgacaccatcattgtcaacctgctggtgcaagttcctccggaccagccccgt
ctgactgtctccaccacctcctccacctctatcaccctggcctggatccccggggacaac
ggaggatcctccatcagaggtttcgtgctgcagtactcggtggacaacatagaggggtgg
agggatgtgttcatcagttccagtgagaggtccttcaagctggacaacctgcgctgtggc
acctggtacaaggtcaaactggccgccaagaacagcgtgggagcgggacgcatcagtgaa
atcatcgaggctaagacccacggacgagagccccagttcaataaggaccatccggtgttc
acccacgtcaactctacccacgcccggctcaacctgcagggctgggcgagcggtggctgc
cccatcacggccgtgctgctggagttcagacctaaggggaactgggcgtggcagaacgtt
cgcaccaacgccacggccgacgtgttcctggctgagctccgcgaggccacctggtacgag
ctgaagatgaaggcgtgtaacagcgccggctgcgggaaccagagctctcatttcgccacg
ctggactacgacggcacaggtaccatccctcccatcaagtcagcgcggcccgaaggcgat
gacgttaagaagctcttctccattggctgccccgtcatcctggtcactctagtcgccgcc
ctgctcttcatcatccgcaagaaacgcaaagagaagagactgaagagactgagagatgcc
aaaagcctggctgagatgctgatcagcagtaagaataaccggagctttgacacccctgtg
aaggggcccccccagggcccccgtctccacatcgacatccccagagtccagctgctcatc
gaggacaaggaaggcatcaagcagatcggtgaagacaaagccaccatcccagtgacggac
acagagttcagccagaacgtgaatccccagagcttctgtacgggcgtgtctgtgcatcac
cccgccctcatccagaacaccggccctctgattgacatgtccgacatcagaccagggaca
aacccggtgtcgaggaagagcgttaagtcgacccacagtacgaggaaccgctactccagc
cagtggaccctgaccaagtgccagtcgtccacgcccgcacgtaccctcacctccgactgg
cgcaccgtgggctcccagcatggcatcactgtcaccgagagcgacagctacagcgccagc
ctctcacaggacacggataaagggcgtaacagcatggtgtccacagagagcgcgtcctcc
acctatgaggagctggcgcgggcctacgaacacgccaagcttgaggagcacctgcagcac
gccaagtttgagatcaccgagtgcttcatctccgacagttcctcagaccagatgaccacg
ggcaccaacgacaacgccgacagcatgacctccatgagcacgccgtccgaaacaggcctg
tgtcgcttcaccgcctcgccacccaaaccccaggaatacgaccgcggcagacctaccaac
gttgccgtgcccatcccccaccgcgccaacaagagcgagtggactggaaaaagtgactac
tgtaaccttcccctctacatgaagacagaccctttcttccggaagcagtcggagctgcgt
gacccgtgcccggtggtgccgccccgcgaggcctccatccgcagcctggcccagcgggcg
taccacacccagggccgccacatgactctggactcctccaagcagcagcaggctctgact
gtgggccatgctggcctggccggcctcagcgcctcagggggagcatcagggggcggtggt
agtgtaggaggggtgactggagggccgtctggtggttccagcacctcctccctgccccag
aggactctcaccatgcccggctcctcctcttcctctgcgcagagcgctgcagccgctacc
gacgcagccgcgggaggagactctagagaccctctgctggagagcagctcgtcaggcccg
ggcagactagagagacagaagcaggcggctggcggggcctactccaaatcgtatacactg
gtgtag
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