Oncorhynchus gorbuscha (pink salmon): 124006267
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Entry
124006267 CDS
T07892
Name
(RefSeq) calsyntenin-3-like isoform X1
KO
K22661
calsyntenin 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124006267
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Cadherin related
124006267
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GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
124006267
NCBI-ProteinID:
XP_046172131
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Position
LG19:26728402..26786206
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AA seq
960 aa
AA seq
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MDRMNCLSFLLLCLSSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPSGSSSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGANSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDHIVRVEALDADCS
PQYSQICFYDIITPNIPFVIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWIGWSKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSTHVAM
VPDSIAAAVSGDHFTLQLWMRRGGINTQPPTNQARGNRREEETIVCSTVKNGQSNDDSFS
HYSLSVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTF
DPALIHDNGAIPNPAPRQRLVIGACWETEDKQKDILNNTIPEGKDTGKYVGGYRGLLSGV
TVRPGSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAV
QQVTYRNSLRFATPGVRPLKLTTSLRCFNEESCLTLRQLEGYLVVLQPDAPQISLSGVGP
HLARPAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPL
GEELNPEREELLVDMDALRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSAR
FERRFRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHSGELSGH
TLPNPHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGTGGGSKEDSGQWDD
SALTIIVNPMESYESRMGISADTEGEGEEDEEVVESPDDANDDQRIIIKKEGRDGNPRRY
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgaattgtctctccttcctcctcctttgcttgtcttcagttgccaatggc
aacaaagccaataagcacaagccatggatcgagacggagtaccagggtattgtcatggag
aacgacaacaccgttcttctcaacccaccactgttcgccctggataaagacgctccactg
cactacgcaggtgagatctgtggcttccgggtgcacaatgggccctcgggatccagttcg
gtccagtttgaggcggtggttctggaccgctcgacaggggagggcctggtccgctctaaa
gagccattggactgtgagagccagcgggagcacagcttcaccatccaagcctatgactgt
ggagagggccccgatggagccaacagcaagaagtcccacaaggccacggtgcatgtacgt
gtgaacgacgtaaacgagttctccccagtgttcgtggagcgtcgctacgaggcctccgtc
ccagaaggccgcctgttcgaccacatcgtgcgcgttgaggccctcgacgcagactgctcc
ccgcagtacagccagatctgcttctacgacatcatcacccccaacattccctttgtcatc
gataacgatggtaacattaagaacacagagccattggattcgaaacgccagcgtgtccac
accttctgggtgaccgcgttcgactgtggcaagaaccgagctcaggccgacgcccaggtc
gtcgtcacggtcaaaccgtcctgcaaacccggctggatcggctggtcgaagcgggtggag
tatacccccgggtcaggcagcattcccctgttccccagtttgcacctggagacctgcgaa
gagactgtgtggaacatccaggccaccgtagagctgcagactggccatattgggaagggc
tgtgacagggacagctactcagaccgatcagtgcgcagactctgtggtgctgtgagaggt
gaagtggacttactcccgcccccgtccccagcagccaattggacctcagccttgcccacc
ctcccttcttctgattcatccctggtgttctccttcaatggctccacccatgttgccatg
gtacccgactctattgccgcggccgtatccggagaccatttcaccctccagctgtggatg
agaaggggtgggatcaacacccagcctccgactaatcaggccagaggaaaccgcagggag
gaggagactatcgtctgcagtaccgtcaagaatggtcagtcaaatgacgactccttctcc
cactactctctctccgttcacggctgccgtctatctcttttctactggccagatgtctcc
gctgcgcggcccgtaaaattcctctggaaactggagcaggtgtgtgacagcgaatggcat
cacctgtccctcagtgtccagttcccctctgtgacattgtacgtggacggagtcaccttc
gaccccgccctcatccacgacaacggagccatacccaaccctgccccacgacagcgactg
gtcattggcgcctgctgggagacagaagataaacagaaggacatccttaacaacaccatc
cctgaggggaaagacacaggaaagtatgtgggtggttaccgtggcctgttgtcaggggtg
acggtgcggccagggagtgtggagcctcacagtgtggtggagtgtctgtacgcctgcagg
gaggggctggactttggggacctggagaccttgggctcaggcatgaaggtgcatgtgaac
cccagtcagtctgtgctggttctagagggtgatgacattgagagcttcaacagggccgtg
caacaggtcacctacaggaactctctccgcttcgccacccctggagtcaggccactcaaa
ctgaccacctcactcaggtgtttcaatgaggagagttgtcttacgctcaggcagttggag
ggctacctggtggtccttcagccagatgcccctcagatctccctgtctggggtcggcccc
cacctggcccgccccgcgcctgaatttgagggcccccgtggtgtacccctcttcccagag
ctgaggatcgtgtgctccctgtctcatgctgttaacacagccgctcagggcatggaagga
ggagctctgatgtcagacgccgtggcccacactctggacggctgtgaggtccagcccctg
ggggaggagctaaacccagagagggaggagctcctggtggacatggatgccctgagagag
aggggtctggagataatcaacaccactgcttacatcgccatcacaggagctgagtccatc
tccgtgtatgaggatgtccttcggtccgtccgttaccggctggctaaaggctcggcccgc
tttgagaggcggttccgtctgtcctgctccgagatgaatggcagatacaccagcaacgag
ctcaccctggaggtgaacttcctgcactccctggacagtctgtaccacccgtctcacctc
ctggcctctcagcagcagtttcttcacccatctcaccactctggggagctaagtggacac
accctgcctaacccccaccgcaactcagtggtgccaggagcggccacagtcatcatcatg
gtgtgcgtgggcttcctggttgtcatggtgatcctgggagtgtttcgaatccgctccatc
caccgccgtggcgagggcaccgggggagggtctaaggaggatagcggccaatgggacgac
tctgccctcaccatcatcgtcaaccccatggagtcctatgagtctcgtatgggcatctca
gctgacaccgaaggtgagggggaggaggacgaggaagtggtggagtcacccgatgacgcc
aacgacgaccagcgaatcatcatcaagaaagagggcagagacggcaacccccgtcgctac
taa
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