Oncorhynchus gorbuscha (pink salmon): 124006310
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Entry
124006310 CDS
T07892
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124006310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124006310
03021 Transcription machinery [BR:
ogo03021
]
124006310
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
124006310
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
124006310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
124006310
NCBI-ProteinID:
XP_046172202
LinkDB
All DBs
Position
LG19:7533770..7594287
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AA seq
753 aa
AA seq
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MTKTAALATMDFCNMWVEEIRMSKPVEVENTVADSPMESADSERNGPDSNHQLQQMKISP
FHLSPTLSSNKNKMEECGEMSPGPAPHHSHAPSQTPLPHTQLMLTGSQLAGLTALLPAQQ
QLLLQQAQAQLLAAAVQQSVQQSNAAHAAHAAHAAHAAAQANQQAQAAAAANQHAQQQAG
QTGQQGKSQPQGQSTQEQTGQPVPVPPTHPQLTLSQPIQLTAQDIQQLLQLQQLVLVPGH
HLQSPQFLLQQHQGQQGLLIPSLLHSSGLLSTPNLIQLPQQNQGSLLSTPRLGLQAQRDK
AMEGSGVMTSVSSVTSHPEEPSDLEELEVFARTFKQRRIKLGFTQGDVGMAMGKLYGNDF
SQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSTDSTMPSPSSLSSSSMGFEGLPGR
RRKKRTSIETNVRVALERAFITQNQKPTSEEILCIADQLSMEKEVIRVWFCNRRQKEKRI
NPNSATPPLPSQPPPKPHRRTNPPCYSPHMMSSQLSNQLSSQMSSQLSSQLSSQLSQAVT
SLSTTLTTMSSFSPLIPSGPTHSSLSSASSPVTPPRSTASPATPSHSTLSLNTGLWRLGK
KNGDVSNYITDFAANLRNTVMGVNTGNQALNQALLSNNPLATIQALAASGGQLPLSSLEG
GSKVLLGGAGGQGGGLQSSFFLNHPAFLHMGHNPGAGLVSAAVAKASQPSPFPSTSSISP
TPCSPSPCSSPASSCDFDELAHSPSSLGGAKIE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagacagcagctctagcaaccatggacttctgcaatatgtgggtagaagaaatc
aggatgtcaaagccagttgaggttgagaacacagtggctgactctccaatggagagcgca
gattcagagcggaatggtcctgactcaaatcatcagcttcagcagatgaaaatcagtccc
tttcacctttctccaaccctcagcagcaacaagaataagatggaagagtgtggtgagatg
tccccgggccctgctccccaccacagccacgccccctcacagacgcccctcccacacaca
cagctcatgctgaccggctcccaactggcagggttgacagctctcttgccagctcagcag
cagttgttactgcagcaggctcaggctcagcttctagctgcagctgtgcagcagtctgtt
cagcagtccaacgcagctcacgcagctcacgcagctcatgcagcccacgcagccgcccaa
gccaatcagcaagctcaggcagccgcagcagccaatcaacatgcccagcagcaggcggga
cagacagggcagcagggcaaatcacagccccagggacagagcacacaggaacagacaggt
caacctgtccctgtcccgcccactcatcctcagctcaccctctctcagccaattcagctc
accgcccaggacatccagcagttgttgcagctgcagcagttggttctggtgccaggacac
cacctgcagtctcctcagttcctcctccaacagcaccaagggcagcaaggcctactgatt
ccctcacttcttcactcatcaggactgctatcaacaccaaatctgattcagctacctcag
caaaaccaagggagcctcctgtccactcccaggctggggctccaagcacagagagataag
gctatggagggcagtggggtcatgacctctgtgtcctctgtgacctctcaccccgaggag
cccagtgaccttgaggaactggaggtgttcgcccgcaccttcaaacagagacgcatcaaa
ctgggctttacacagggtgacgtgggaatggccatggggaagctatatggtaatgatttc
agccagaccaccatctctcgcttcgaggccctcaacctgagctttaagaacatgtgcaaa
ctcaaaccactactggagaagtggctcaacgatgcagagaccatgtccacagacagtact
atgcccagccccagctctctgtcctcttcctcaatgggcttcgagggcctgccgggccga
cgcaggaagaaaagaaccagcattgagactaacgtccgcgtggccctggagagagccttc
atcacgcagaaccagaagcctacctcagaggagatcctgtgtatcgcggaccagctcagc
atggagaaggaggtgatccgcgtgtggttctgcaaccgccgacagaaagagaagcgtatc
aaccccaacagtgccacccctcccttgcccagccagcccccccccaagccccaccgacgc
acaaaccccccctgctacagcccacacatgatgtccagtcagctgtccaatcagctgtcc
agtcagatgtccagtcagctgtccagtcagctgtccagtcagctgtcccaggcagtgacc
agcctcagcaccacattgaccacaatgtcatcgttctcccctctgatccccagtggtccc
acccactcatctcttagctccgcctcctccccagtgactcctcctcgcagcacagccagc
ccagccactcccagccacagcacactgagtctcaacacaggcttatggcgtttgggtaaa
aagaatggtgatgtgtctaactacatcaccgattttgctgcaaacttgaggaacactgtg
atgggagtaaacacagggaaccaggctctgaaccaagctctcctcagcaacaaccctctg
gctactatacaagccctagcagccagtggtggccagctgcccctttccagtcttgaggga
ggcagtaaggtgttgctgggtggtgcaggggggcagggagggggtctccagtcctccttt
ttcctcaaccaccccgctttcctccacatgggccacaatcctggtgctggattggtcagc
gctgccgtagccaaagcatcccagccctcccctttcccctccaccagtagcataagcccc
accccctgctccccctccccttgctccagccccgcctcttcctgcgacttcgatgaattg
gcgcacagcccatcctcattgggaggggctaagattgagtga
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