Oncorhynchus gorbuscha (pink salmon): 124006529
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Entry
124006529 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124006529
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124006529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
124006529
NCBI-ProteinID:
XP_046172554
LinkDB
All DBs
Position
LG19:7745046..7811723
Genome browser
AA seq
2708 aa
AA seq
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MKPLKRQRGCSPPSTRAKGGKKRGATETPPERDNRNKLRKENQGGQPQTTPPAHLPRKQS
TTSSESSQQEPIRGSETPKKEGPREQVPPRQPEVGGKPVGPNSTPTSSHNNILTIPIPTT
SPSPTSMSSRKTATFKARVPKKKYIAEHYAGSNAPSLTFTPAPMHNSHSNYSSTSSSINI
IINSSSTNSNNSSNNISNSSRTNTTINGINSGTNSISNSISNSISNSISNSISSSSVSHS
LAPSVSNEERRVAASSHSHGPGEQGMTGASIGPNNGSVAPQDRERDPQGGETEAEGAPNS
VRSVSTDTASEHDLEVNSQPSTSPARAPYQGSLSGADALAKGLKNQRVLARCRWRDRLNG
EQGGRERERDGPLSPMFRAGVVRRVSGGSADIQLQGEEGILCYPFQGGTAHPEGEETSVE
FILDAPPPGTASVAIGTRVCVPFGGGRGRDGGEQGTPQLYREGVLSQVDPHPAVSFPYRV
LLCEDLEALENGGREEEGGMEEKRRRAQAQAVWVSRQSLRLLTLPWELPHPGGSERERER
EERERREEMEVEREVCQLSIGMALGGPMGAGVRLVHSFSPDGVVGGHHYGNVPPHPSSLV
TTSVVTITGEGYPDREIEQEREQERQKQPQTPEDDMEMSRFTMGTQHRHILSKPLLGGHS
YPSSQHLVQGLGTPLGSHLSSLTLPGPEALGMTPPPHLPPSKSALVPLDKTPSQIPTPNP
GGGSTSSSASSSRSRTPLSAALQKYKKGDVVCTPNGIRKKFNGKQWRRLCSREGCMKESQ
RRGYCSRHLSMRTKEMEGVGGGGERDRGRGGGGSSSGTVTPQTCVXFDWDETSRDSSEAS
SRGDSRPRLVLPSLLPHDFSRFDFDECEAATMLVSLGSSHSGTPSFSPISNQSPFSPAPS
PSPSPLFGFRPANFSPITASSVLPPPRRHRHPSATGGKLGTPGGAERERHTSGVQPSFHT
NLTFTVPMSPSKRKTDVPPPPSSHPHHDYPPKPELEQGDLNPASFPVLSPQTPAHTHAYT
PTFSCPRGVSTPTSRPPSSSAISPPPLLVSPTPPSPPGPCRFHPTSQQALRDSPVIVRNP
EVPLAKFTERPLGRGGGGSRXPKSLNSVTPQPVSTLQVSVPINAAAATATNGTVLLQSPT
PTLVLVSSAPPSLTSVTPGYPALACISISTTPPSSGPPLTNPASPGEGRGRTERTGSFGG
EVQQPVACHPSPTALLPLILPAENLHPTPCKDIIMGRPGTVWTNVEPRSVPVFPWHSLVP
FLAPTQSDASTQSGEGQQPINHPQAASLKTESQGGAVLLQEANEGPPSLERRPTTRLTPS
TDDLAPEREAERERPDSETESDVDDPFFPSVLPEPLSVTPVKRRTQSLSALPKDGDKSSP
GKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDL
AFQVKEAHFKAHPDWKWCNKDRKKSSSDGRGLPGPGGKDIRERSMSETTEPHGVELKGVG
PGLLGVSERNPGEGHVGQLPRPRAFSQSAVHSLERSDRGNTQALAELSQMCGDGGGQFSG
RAQTLSRSQRGVSEDMTSDEERMVICEEEGDDDVIEDPYPASSIDLKCKERVTDSDSDNA
SGNESDRKRVFAPVICSSSSQPIPHGRSVSLSSYPSKRYDEERGGGLSDRRRKRGIEGGG
GDGGGVASLSLSLSSSGHSVISSPGGPVPSALAPLGLSPLLGLGAVRVASTVVTNVVRPV
VSTPVPIASKPRDGAASSIPHPPDRRSLPSQQAQLLIGSGVGSGGPGYYSSSSPNPIGAG
AGPGGLVTSLVFPGHSQSTVQLISPSPHLSSHHQLPPTAPVSAPTQNHINGPLPLSLLQP
QFLSSSSLASPGGKAITRSNTSCPPYQPVPIPRAPPLNCTTCRNSIFNLPTAPSTHMSIA
NGKQVGPGSLMGYASSPAVGVVSPGARVQSQSPVLQGKMLLPMATVRTASAPAQQYPLVA
PPLPVQNGAQAGSKIFQITPMPVVQSQLQQGGAGHPGSPFPVTLGTATVLHQGSAPSQTV
LLPPPPTRITYVQSTPGVPSPLPLVSTTTGSSSPQQAQPTPGSAYVPLPLATLGFTAIAP
PGQNLVQPLITGQPPLQPPVQSPTCPSLPSGPASASVGQIITAIYPPTNITMATGVVSMS
AVPPNMVYTVSSSSSLSTHILPKHTFAPATPTTHTHIQLQSDRQTDRQAGERPTDRMSHS
QSEKVADRPAETQPELQRTDRWTGSLTQADRQTARQAQTFNKSSSLVAPPSGSSLSLRPC
SPPLPSHTSTGSAPGTPKLPQLPVRTPQKIKATVANIPVGSYEGGGRGKEREKNRERERE
STGANSRFSFELEHPGKSASPSQNTHAAEEPPSDRLPEGHGPGDNTDTRSTEASNESGWK
DSVPSSPLPPLLGTDPALPPPQSDKDAPPPKKVKARPPPLKRTFDSVDKVLSEVYFEERF
AQLPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSSTEDPVSPKRKSRRRSS
CSSEPSTPKSAAKCEGDVFTFDRPAPPSVCPPPGSGTGTGAEGEDILGELEFDKVPYSSL
RRTLDQRRALVMQLFQEHGFFPSAQATAAFQARYSDIFPTKVCLQLKIREVRQKIMQTAV
PSETNEASSLPGPSGAQSGEGTGGGAEPLGEEVDREREEAPSGQVCEGDWREFRTSPSLP
MIGYRRCQ
NT seq
8127 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccactaaagagacagaggggatgctctcccccctccacgcgggccaaagggggg
aagaagagaggggcgacagagacccccccagagagggacaacaggaacaaactcaggaag
gagaaccaaggtggacagcctcaaaccacaccccccgcccacttgccacggaaacaatcc
acaacctcctctgaaagctctcagcaggagccaatcagaggcagcgagaccccaaagaag
gaggggcctagagagcaggtgccgccaaggcaacctgaagttggggggaaaccagtgggg
cctaacagcacccccacctcttcccataacaacatcctcaccatccccatccccactacc
agtcccagccctacctccatgtccagtaggaaaacagccaccttcaaggccagagtcccc
aagaagaagtacattgctgaacactatgctggtagcaacgcgcccagcctcaccttcacc
cctgcccccatgcacaacagccacagtaactacagtagtactagcagtagtattaacatc
atcatcaacagcagtagtactaacagtaataacagtagtaataacattagtaacagtagt
aggaccaacactactattaatggtattaacagtggtactaacagcattagtaacagcatt
agtaacagcattagtaacagcattagtaacagcattagtagcagctcagtcagccactcg
ttagcccccagtgtgtccaatgaggaaaggagggtagccgctagcagccacagccatggc
ccgggggaacaggggatgacaggggcctccatagggcccaacaatggcagtgtggccccc
caggacagagagagagacccccagggtggggagaccgaggcagagggggcccctaactca
gtacgctccgtatccacggatacagccagcgagcacgatctggaggtgaactcccagccc
agtaccagccctgctcgagccccctaccagggcagtctgtctggggcggatgccctggcc
aaaggcctgaagaaccagagagttctagcccgctgtcgatggagagacagacttaacgga
gagcaaggtgggagggagagagagagggatggacccctgtctcctatgttcagggctggg
gtggtgcggcgggtgagtgggggcagcgctgatatccagctgcagggggaggaggggata
ctctgttacccctttcagggggggaccgcacacccggagggggaggagactagcgtggag
ttcatcctggacgcccctccacccggcacggcgtccgtggccatcgggacacgcgtatgt
gtgcctttcggagggggaagggggcgagatgggggtgaacaggggacacctcagctatac
agagaaggggtgctgtcccaggtagacccccaccctgccgtgtcgttcccctacagggtg
ctactgtgtgaggatctagaggcgctggagaatggagggagggaggaggagggagggatg
gaggagaaaaggaggagggcacaggcccaggctgtatgggtgtccagacagagcctgagg
ctgctgactctcccctgggaactgcctcacccaggggggagtgagagggagagagagagg
gaggagagggagaggagggaggagatggaggtggagagggaggtgtgccagctgagtatt
gggatggcgctgggtgggccgatgggagcgggggtgaggttggtgcatagcttctctcca
gacggggtggtgggggggcatcactatggaaacgtcccgccccacccctcctcgttggta
acgaccagcgttgtcaccatcactggagagggttaccctgacagagagatagaacaagag
agggaacaagagagacagaaacagccccaaacaccagaggatgacatggagatgtctagg
ttcactatgggtacccagcatcgccacatcctctccaagcccctcctcggggggcacagc
tacccctcctcccaacacctggtccagggcctgggcacgccactgggctctcacctgtcc
tccctcaccttgcctggccccgaggccctgggcatgacccccccaccacacctaccccct
tccaagagtgccctggtccccctggacaagaccccctcccagatccccacccctaaccct
ggaggggggtctacctcctcctcagcctcctcctcgcgctcccgcacccccctgtcggcc
gccctgcagaagtacaagaagggggacgtggtgtgcacccctaacggtatccgcaagaag
ttcaacggcaagcagtggagacgcctctgttccagagagggctgtatgaaggagtcccag
agacgaggctactgctcacgccacctctccatgagaactaaagagatggagggagtggga
ggagggggagagagggacagggggagaggaggaggggggagcagttcggggacggtcacc
cctcagacctgcgtgnggtttgactgggatgagacgtccagagacagcagcgaggccagc
agtagaggagactcccgccctcggctggtgctgccctccctcctaccccatgacttctcc
aggtttgactttgacgagtgtgaggcagcaaccatgctggtgtctctgggcagctctcac
tctgggaccccctccttctccccaatctccaaccagtcccctttctcccctgccccttct
ccctctccctccccccttttcggattccgtcccgccaacttctcccccatcaccgcctcc
tccgttcttccccctcctcgcagacacagacaccccagtgccacagggggaaagctgggc
acccctgggggggcagagagggagaggcatacctcaggggtccagccgtccttccacact
aacctgaccttcactgtccccatgagccctagcaaacgcaaaacagacgttccccctcct
ccctcctcccacccccaccacgactacccccccaaacctgagctggagcagggggacctg
aaccctgcctcgttccccgtcctctccccccagaccccagcacacacccacgcttacaca
cccaccttctcctgtccccgaggggtgagcacaccaaccagccggccaccctcctcctcc
gccatctcccctcctcccctcctggtgtccccaactcccccctcccctccaggcccctgc
cgtttccaccccacatcccagcaggccttgcgggactctccagtgatcgtgcggaacccg
gaggttcctctggccaagttcacagagcgtccgttaggccgtggggggggggggagtagg
tgacctaagagtcttaacagcgttactccccagcctgtctccactctccaagtctctgta
cccatcaacgctgctgctgccacggcaaccaacggcaccgtcctcctccagagccccacc
cccaccttggttctggtgtcatccgccccgccctccctgacctccgtcacccccggttac
cccgctttggcttgcatctccatctccaccacgcccccctcttcgggaccccctctcacc
aacccagccagcccaggggaagggcggggtaggacggagaggacaggctcgtttgggggg
gaggttcagcagccagtggcctgtcacccctctcctacagccctgctgcccctcatactg
cctgcagagaacctgcaccccacaccatgcaaagacatcatcatgggacgccccgggaca
gtctggaccaacgtggaaccccggtcagttcctgtgtttccctggcattcattggtccct
ttcctggcaccaacccagtcagatgcctctactcagtctggtgagggccaacaaccaatc
aatcacccccaagctgccagtctgaaaacagagtctcaggggggtgcagtgctgctacag
gaggccaacgagggccccccctccctagagagaagacccacaacacggctgactccctcc
acggacgacctggccccggagagggaggccgaaagagagaggccagacagtgagactgag
agtgatgtggatgacccgttcttccccagtgttcttcctgagcccttgtctgtgactcct
gtgaagagacgcactcagtccctcagcgccctgcctaaagatggggacaagagcagccct
ggcaagagggagaaggaccacatcaggcggccgatgaacgcgttcatgatcttcagtaag
cgtcatcgagcgctggtgcaccagaggcaccccaaccaggacaaccgcacggttagcaag
atcctgggcgagtggtggtatgccctggggcccaaagagaagcagaaatatcacgacctc
gccttccaggtgaaggaggcccactttaaggcccacccagactggaagtggtgcaacaaa
gacaggaagaagtctagttctgatggccgagggctcccggggccggggggcaaagacatt
agagaaaggagcatgtctgagaccaccgagccccatggtgtggagctgaaaggggtgggg
cctggcctgctgggtgtgtctgagcggaatccaggggaggggcatgtaggtcagctaccc
cgcccccgagccttctcccagagtgccgtgcacagcctggagaggagtgacaggggcaac
acacaggccctggctgaactgtcacagatgtgtggggatggtggtggccagttttcgggg
cgcgcccagaccctgtcccggtctcagaggggggtcagtgaggacatgaccagtgacgag
gaacgcatggtcatctgtgaagaggagggagacgacgatgtcatcgaggacccgtaccct
gccagctccatagacctgaagtgtaaggagagagtgacggacagcgacagtgacaacgcc
tctgggaacgaaagcgatcgaaagcgtgtctttgctccagtgatctgctcttcctcctcc
cagcccatcccccacggacgctccgtctctctctcctcctacccttccaaacgctacgac
gaggagagaggaggggggctctcagaccgcaggaggaagagaggaatcgagggaggaggt
ggtgatggaggaggagtggcatccctctctctttccctgtcctcctcaggccactctgtc
atctccagccccggaggcccagttccttctgcccttgccccccttggcctgtctcctctc
ctcgggttgggggctgtcagagtggcctctacagtggtgaccaacgtggttcgtccggtc
gtgagcacgccagtccccatcgctagtaaaccccgagatggagcagcttcatccattcct
cacccaccagacaggaggtccctcccatcgcagcaagcgcagcttctgattggatccgga
gtaggaagcggagggcctgggtactactcctcatcctcacccaatcccataggtgcaggg
gcgggtccaggggggctggtgaccagcttggtgttcccggggcacagccagtccaccgtc
cagctcatcagtccctccccccatctgtcctcccaccaccagctgccccccaccgcccct
gtctctgcccccacacaaaaccacatcaatggccccctgcccctctccctgctccagccc
cagttcctctcctcatcatctctggcatcccccgggggcaaagccatcacacggtccaat
acatcctgcccaccctatcagccagttccaatcccaagagcccctcccctcaactgcaca
acctgccggaacagtatcttcaacctgcccacagctccgtccacccacatgtccatagcc
aatgggaagcaggtggggccgggctcgctgatgggatacgcctccagcccagccgtggga
gtggtcagcccgggagccagagtgcaatcccagtccccagtcctacagggcaagatgctg
cttcccatggcaacagtgaggacggcatccgcccctgcccaacagtaccccctcgtggct
ccacctcttcctgtccagaatggagctcaagcaggaagcaaaatcttccagatcactccc
atgcctgtcgtccaatcccagctccagcaaggcggggcagggcatcctgggagccctttt
cccgttaccttgggaacggccacagtgttgcaccaaggttctgccccatctcagactgtg
ctgctgccgcccccaccaaccaggatcacctatgtccagtccacgccaggagtcccctct
cctctgcctctggtctccacaacaacaggctcctcctccccccagcaggcccagcccacc
cctggatctgcatatgttccgttgcccctagcaacgctgggctttacagccatagctccc
cctggacagaacctagtccaacccctcatcacaggtcagcctccccttcagcccccagtc
cagtcccctacctgcccctccctcccctctggcccagcctctgcttcagtgggacagata
atcaccgccatctacccccctaccaacatcaccatggcaaccggggtggtctccatgtca
gccgtgccacccaacatggtgtacacagtctccagctcctccagtctgtccactcacatc
ctgcccaaacacacattcgcccctgccacccccaccacacacactcacatccagctccag
tcggacagacaaacagacaggcaagcaggggagagacccacggaccgaatgtctcactct
cagtcagagaaagtggcagacagaccagcggagacgcagcctgagctacagcgtacggac
agatggacaggctccctcacgcaagcggacagacagacggcgaggcaagcccagaccttc
aataagagcagcagcttagtggcgcccccaagtggctcctcattgtcactgcggccctgc
agcccccccctgccctctcacacttccacaggcagtgcaccaggcacccccaaactcccc
cagctcccggtgagaacccctcagaaaatcaaagccactgttgccaacatcccagtgggc
agctacgagggaggaggccgaggaaaggagagggagaagaaccgagagagggaaagagag
agcactggagcaaacagtcgtttttcctttgagctggagcatcctgggaagtcggcgtcc
ccctcccaaaacacacacgctgctgaggagcccccctctgacagactccctgagggacac
ggccctggggacaacactgacacacgcagcacagaggccagcaacgagtccgggtggaag
gactccgttccctcctcacccctgccccctctcttgggtacagaccctgccctgccacct
ccccagagcgacaaagacgcccctcctcccaaaaaggtgaaggcccgccccccgccactc
aaaaggacctttgactctgtggacaaggtgttgtcggaggtgtattttgaggagcgtttt
gctcagctaccagagttcaggccagaggaggtgctgccctcccccaccctgcagagtctg
gccacctccccccgcgccattctgggcagctaccgccgcaagaggaagaactccacagac
ctggactcgtcaacagaggaccccgtgtctcctaagaggaagagtagacggcgctccagc
tgcagctcggagcccagcacacccaagagcgccgccaagtgtgagggagacgtcttcacc
ttcgaccgaccagcccccccgtctgtgtgtccccctccagggtccgggacagggacagga
gctgaaggagaggacatcctgggggagctggagtttgacaaggtgccctactcctctctg
agacgcaccctggaccagagacgagccctcgtcatgcagctcttccaggagcatggcttc
ttcccctcagcccaggccacggcagccttccaggcacgctactcagacatcttccccacc
aaggtgtgtctgcaactgaagatcagggaggtccgacagaagatcatgcagactgccgtc
ccctctgagaccaacgaggcctcctcgctccccggaccgtctggcgcccaatcaggggaa
gggacaggaggaggggcggagccattgggagaggaggtggatcgagagagggaggaagca
ccttcaggacaggtctgtgagggggactggagagagtttaggacctcgccctcacttccc
atgattggctacagaagatgccagtaa
DBGET
integrated database retrieval system
