Oncorhynchus gorbuscha (pink salmon): 124006639 Help Entry 124006639         CDS       T07892                                  Symbol sympk Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism ogo  Oncorhynchus gorbuscha (pink salmon) Pathway ogo03015   mRNA surveillance pathway ogo04530   Tight junction Brite KEGG Orthology (KO) [BR:ogo00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     124006639 (sympk)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     124006639 (sympk)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ogo03021]     124006639 (sympk)    03019 Messenger RNA biogenesis [BR:ogo03019]     124006639 (sympk) Transcription machinery [BR:ogo03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      124006639 (sympk) Messenger RNA biogenesis [BR:ogo03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      124006639 (sympk)     U7-dependent histone pre-mRNA processing factors      124006639 (sympk) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N PDS5 Adaptin_N Cnd1 Motif Other DBs NCBI-GeneID:  124006639 NCBI-ProteinID:  XP_046172642 LinkDB All DBs Position LG20:complement(27470375..27481630) Genome browser AA seq 1267 aa AA seqDB search MNNKASNKKMASNNGESAGVRTSVASQFFNEDEDTAIVDMTTSEKVVDLLNQAALIATDS KLTVLKQVQELIINKDPSLLDNFLDEIIAFQTDKSMEVRKFVIGFIEEACKRDNELLLKL IANLNMLLKDESVNVVKKAILTLTQLYKVALQWFVRSKTMSDMQEACWDMVTQMKEEVLA MLEVDNDGVRTHAIKFTESLIITLSPRTSDSDTPKRQEGDISLDKISKDHAYIRYDTLCG EGKSALEQLLKFMVHPAISSINLTTALGSLATLARQRPMFMSEVVQAYETLHANLPPTLA KSQVSSVRKNLKLHLMAVLKHPCSLEFQGQISTLLLDLGMSQNEITRHTPAPREPRKRPR HEPYTEGKKLKIEPALIEDDEDKEEPAPPSISKPSSVPVVQSAIDLTAEFLRPLLSPENV ANLVLISMVYLPDVMPASFQATYTPVESAGTDAQIKHLARMMATQMTAAGVGPGLEQCKA RDEKAGKEEGMDEGIGESSKDLLIKRKVPVMGQAISVVGGGYGDKSQTETGEAPQVKRLP EPILPSTQIKTPGTSGKRKVFRLADVIQPLTDTQLEKLTNMAVKRILHSEKAIAQSGMAH VRVKLLSRLVTQFEGMMKDDVLEFILEDIRTRSDLAFSLLYQEYNTYLSQQPTGLLDSYD HCLFTLLSGLQEKPEQRDGLFTKIVLEAPLITESALEVIRRYCEDESRVYLGMTTLKELI VKRPSRQFQYLHVLLDLSSHEKEKVRSNALSFIKRMYEKDQLRDYIEKFALNYMQLLVHP NPPSLLFGADKDTEVASPWTEDTVRQCLYLYLSLLPLNHRLVHELASVYTEAIADIKRSV LRVIEQPIRGMGMKSPQLLLLVENCPKGAETLVTRCLHILTDKVPPSPELVERVRDLYHK RVPDVRFLIPVINGLEKKEVTQALPKLIKLNPIVVKEVFNRLLGTQHSEGSSSMSPLTPG ELLISLHNVDSTKCDMKSIIKATNLCFGEKNVYTSEVLAVVMQQLMEQSPLPILLMRTVI QSLSMYPRLGGFVMNILSRLIVKQVWKYPKVWEGFVKCCQRTKPQSYSVLLQLPPAQLTS VFERCPEMREPLLQHVHSFTPHQQAHIPASIMTVLEANSKQPEPEAMQPVVLERQVETPI ATIAANVTITPVATFTPVATPPVRAEPIPVPLRDPEPAVQQHLPSKKEEEEPMEEGETAP ACQEETADTTLQVDLPVVEENPTPGPIETVEEPMEEALTEPSDVTDQLKDVTEEGTTEPE TGTGDAE NT seq 3804 nt NT seq  +upstreamnt  +downstreamnt atgaataataaagcatctaataagaagatggcctcaaataacggagaaagtgctggtgtg aggaccagtgtggcatcacagtttttcaatgaagacgaggacactgctattgtcgatatg accaccagtgaaaaggttgttgatctcctcaaccaagcagctcttattgctacagacagc aaactcacggttctcaaacaggtccaggaattgatcatcaacaaggacccctctttactt gacaatttcttagatgagatcatagcctttcagaccgataagtcaatggaagtaagaaag tttgtcattggcttcattgaggaagcatgtaagagggacaacgagctcctgcttaaactg attgccaacctgaacatgctgctgaaggacgaaagtgtcaatgtggtgaagaaggcaatc ctcacactaactcagctctacaaagtggcgctgcagtggtttgtgcgttccaagaccatg tcagacatgcaggaagcatgctgggacatggtgactcagatgaaggaggaagttctggct atgctggaagttgacaatgatggagtccgcactcatgctatcaagttcacagagtctctc atcatcaccctttcaccgaggacgtcagactctgacactcccaagcgccaagagggagac atcagcctggataaaatctccaaagaccatgcctatatccgctacgataccctgtgtggg gagggcaagtctgcactggagcagcttctgaagttcatggtccaccctgctatctccagc atcaacctgaccacagccctgggttccctggccacactggcccgacagaggcctatgttt atgtctgaggtggtccaggcttatgagactctgcatgccaacctacccccaacactggcc aagtctcaggtgagcagtgtacgcaagaatctaaagttacacctgatggcagtgctcaag cacccctgcagcctggagttccagggacaaatcagcactctgctcctagacctggggatg tcccagaatgaaataacccgtcacacgccagccccacgtgaaccgcgcaaaaggccccgc catgagccatacacagagggcaaaaagctcaagattgagcccgctcttatagaagatgat gaagataaagaagagccagcccccccctccatctccaagccctcctctgtgccagtagtc cagtcagccatcgacctcactgcagagttcttgcgccccctgctctccccagagaacgtg gccaatctggttctaatcagcatggtgtacttgcctgatgtcatgccagcgtccttccag gccacatacacaccagtggagtctgcaggaaccgatgcccaaatcaaacacttggccaga atgatggccactcagatgacagcagcgggagttggaccaggactggagcagtgcaaagca cgagatgagaaagctggaaaggaggagggcatggatgaaggcataggggagtcttccaaa gacctgctcatcaagcgcaaagtaccagttatgggtcaagccatctctgtggttggagga ggctatggagataagagccaaactgaaacgggggaagccccccaggtcaagaggctgcct gagcccatcctcccctccacacagatcaaaacacctgggacaagtgggaagaggaaagtg ttcagattagctgatgtgatccagcctttgacagacacccagcttgaaaagttgaccaac atggctgtcaagcgcatcctgcactcagaaaaagctatagcacagagtgggatggcccat gtgcgggtcaagctgttgtccagacttgtgactcagtttgaggggatgatgaaggatgat gtgctggagttcattctggaggacattaggaccaggagcgacctggccttctctcttctc taccaggagtataacacatacctcagtcagcagcccactggcttgttggacagctacgac cactgcctcttcactctactgtccggcctgcaggagaagcccgagcagagggatgggctt ttcacaaagattgtgctggaggctccgttaattacagagtctgctttggaagtaatacga cggtactgtgaagatgagtcgcgggtgtacctcggcatgactactctaaaagagctgatt gtaaaacggccctcaaggcagttccagtatctccatgtgcttctggatctcagctcacat gaaaaggagaaggtgcgctccaatgcgctgtccttcataaagcggatgtatgagaaagac cagctgagggactatattgagaagtttgccctgaactacatgcagctcctcgtacaccct aaccctccgtcgttactttttggggctgacaaggatacagaggtggcctccccctggaca gaggacacagtgaggcagtgcctgtacctctacctgtcccttctgcctctcaaccaccgc ctggttcatgagctggcctctgtctacactgaagccattgccgacatcaagcgcagtgtg cttcgagtgatagagcagccaatccgtggaatggggatgaagtctccacagcttctgctg ttggttgaaaactgtcctaaaggagcagagactctggtcactcgctgcctgcacattctc actgataaagtgcctccatcgccagagttggtagagagagtgagggacctgtatcacaaa cgagtgcccgatgttcgtttcctaattcctgtcatcaacggcctggaaaagaaagaggtg acccaggctcttcccaagcttatcaagctcaaccccattgtggtgaaggaagtcttcaac cgtctcctgggcacccagcatagcgagggtagttcctcaatgtctcctctcacccctggc gagcttctaatttctttgcacaatgttgactcaacaaagtgtgacatgaagtccatcata aaagccaccaacctgtgttttggggagaagaatgtgtacacgtcagaggtcctggctgtg gtaatgcagcagctgatggagcagagtcctctccccattctgctgatgagaacagttatc cagtccctcagcatgtacccccgcctgggaggcttcgttatgaacatcctgtcccgactc attgtcaagcaggtgtggaagtatcctaaggtgtgggagggctttgtgaagtgctgccag aggactaagccgcagtcctacagcgtgctgctgcagctcccaccagcccagcttaccagt gtgtttgagcgctgcccggagatgagggaacctcttctacagcacgtccactctttcacc ccccaccagcaagcccacattcccgcctccatcatgacagtcctggaggccaacagcaaa cagccagaaccagaggccatgcagcctgtagtattggagagacaggttgagacacccatt gcaaccatcgcagccaatgtaaccattacacccgttgcaaccttcacacctgttgcaacc cctccagtacgggcagaacctattccagtaccgctgagagatccagagccagcagtccag cagcatctgccaagtaaaaaagaggaagaggagcccatggaggaaggagagacggccccc gcttgtcaagaggaaactgcagacaccactttacaggtggatttgccagtagtggaagaa aaccccactccgggtcctatagagactgtggaggaaccaatggaggaggcacttactgaa ccttcagatgtcactgaccaattaaaggatgtcaccgaagaaggtaccacagaacctgag actggcacaggagatgcagaatga

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