Oncorhynchus gorbuscha (pink salmon): 124006650
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Entry
124006650 CDS
T07892
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124006650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124006650
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
124006650
Endosome - Golgi transport
Arf GTPase associated proteins
124006650
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124006650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
RhoGAP
Extensin_1
PH
PH_6
Zf_1st_IFT121
Motif
Other DBs
NCBI-GeneID:
124006650
NCBI-ProteinID:
XP_046172652
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All DBs
Position
LG20:31257143..31278117
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AA seq
1252 aa
AA seq
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MSAPLGPDMPVPVPKPRTRYKRAGGSPQIQLSSDRDLIHDTPDTGIHSRGIPPANDLLAE
KEDNPAVILNKPAITSPAEQNPSQCNFLLFRSDSGVTPSYPVLDSNGLCPSVWLSFSPHS
PAVDTDPYVSPAVDTDPYISPAVDTDPYVSPAVDTDPYIRPAVDTDPYIRPAVDTDPYIS
PAVDTDPYIRPAVDTDPYISPAVDTDPYIRPAVDTDPYVRPAVDTDPYISPAVDTDPYIS
PAADTDPYVSPAADTDPYVSPAADTDPYVSPAVDTDPYISPAADTDPYISPAVDTDPYVS
PAADTDPYISPAADTDPYVSPAADTDPYVSPAADTDPYVSPAVDTDPYVSPAADTDTYIS
PAVDTDPYITNVADWEKCPGSGSESESDAVTEEIKNPSHMNNVASGHVCIGVVPSGKPVE
KESMQTRPLKQKIPRAATIRVSRRKQVAVSAGATQAAESSRRENVVSRSSWLDVWKGRRH
NVLWATLDGPLVSFWKKRTDKFTDLVFHVSSITNVCKQDKGRFSLYFCKKHFEFMAHNKA
VQEGWVTSLLASRGWDPPAPPEQHGALTMKDPRSNRVYAAICGHNLWIYNNKEDFQLGVG
LTYVSMNVASVKQTGRHNFSLITPYKTFNFSTDSSRELAVWLGSLNQVILSALSCSEVAH
RLWASPWNKVCADCGSANPEWASVNLLVVVCEACAGQHRSLGIHVSKVRSLKLDSKVWTE
PLILLFVYYGNKAANDVWGHNVPGAEQILPDSSVDQRGDFIRAKYTKGRYRFTHPLASSQ
RLLNQRLCEVVCGPNVPETMSLLCSGARVLCHSGDSQCPTPISLAERAGQAMQTELLRHN
EYTDAPAYVHQVTGPLLGTSDPPSAAGEEELHGKLEEDRFLFSQENDSAACDVLDLREVI
SIFHSSNGSTHEFEMVTLTDELVCNADTEEGLLNHLLHILRVVLPEPIDEEELDGVFAVS
RVSLREGGGLQHTEVWAVLRGGQVLVYPTDQQRHRERLTLNPETQYKIDSSENTIELVTG
ERTMSMQFERDHSCQSWHSLLKRAVTTKRKQRPSLYELPPNAIGNVPPAIERCISHITQY
GLKVDGLYRRCGLATKVSSLVEALSRSPKTAPLEKDEQGLLDAAGALKQYVRQQVVLIPQ
TQRELWVKAAAHTEENLRLATYRRLLKKLPPDNRITLNALCGHFYIVQLYSVENRMTAQN
LALVFVPTLFQELAMNTNMVRLTRELIIHHTLIFLGKEQESDMESEELITKL
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccccctcggtccagacatgcctgtgccagtacctaaaccacggactcgctac
aagcgggctggagggagcccacagatccagctctcttctgatcgggatttgatacacgat
acacctgacacaggaattcatagcagaggtattccacccgcaaatgatttgctggcagaa
aaggaagacaaccctgccgttatcctaaataagcctgccattaccagcccagcggagcag
aatccaagccagtgtaacttccttctcttcagatctgattctggagtgactccatcttac
ccagtactggacagtaatggactctgtccatctgtctggttgtccttctctccacacagt
ccggctgtggatactgacccctacgtcagtccggctgtggatactgacccctacatcagt
ccggctgtggatactgacccctacgtcagtccggctgtggatactgacccctacatcagg
ccggctgtggatactgacccctacatcaggccggctgtggatactgacccctacatcagt
ccggctgtggatactgacccctacatcaggccggctgtggatactgacccctacatcagt
ccggctgtggatactgacccctacatcaggccggctgtggatactgacccctacgtcagg
ccggctgtggatactgacccctacatcagtccggctgtggatactgacccctacatcagt
ccggctgcggatactgacccctacgtcagtccggctgcggatactgacccctacgtcagt
ccggctgcggatactgacccctacgtcagtccggctgtggatactgacccctacatcagt
ccggctgcggatactgacccctacatcagtccggctgtggatactgacccctacgtcagt
ccggctgcggatactgacccctacatcagtccggctgcggatactgacccctacgtcagt
ccggctgcggatactgacccctacgtcagtccggctgcggatactgacccctacgtcagt
ccggctgtggatactgacccctacgtcagtccggctgcggatactgacacctacatcagt
ccggctgtggatactgacccctacatcactaacgtagctgactgggaaaaatgccctgga
tctggatctgaatccgaatctgatgccgttactgaagaaataaagaacccatcccacatg
aacaatgtggcatcagggcatgtttgtattggtgttgtccccagcgggaaacctgtggaa
aaggagtctatgcagaccagacctctcaaacagaagatcccacgtgcggccaccatccgt
gtcagcaggagaaaacaggtagcagtgagcgctggtgctacccaggcagcagagtcctct
cgtagggagaatgtggtgtcccgatccagctggctggatgtatggaagggccgcaggcac
aatgttctgtgggccaccctggatggaccgttggtatcattttggaagaaacgcacagac
aagttcacagacctagtgttccatgtgtcaagcatcaccaacgtctgcaagcaggacaaa
ggacgcttctccctttacttctgcaagaagcactttgagttcatggcgcacaacaaagcg
gtgcaggagggctgggtgacgtccctcctggcctctcgtggatgggaccccccagcccct
ccggagcagcatggagccctgaccatgaaggaccctcgcagcaacagagtgtacgcggcc
atctgtggacacaacctatggatctacaacaacaaagaggatttccagttgggggttggg
ctgacctatgtgtccatgaacgtggcgtcagtgaagcagactggccgtcataacttcagc
ctcatcacaccgtacaaaaccttcaatttctccacagactcatcgagggagctggcggtg
tggctggggagtctgaaccaggtgatcctcagtgccctgtcatgcagcgaggtggcccac
cgactctgggccagcccatggaacaaagtgtgtgccgactgtggcagtgccaaccccgag
tgggcctcagttaacctgctggtggtcgtctgtgaggcctgtgcaggtcagcatcgctct
ttgggcatccatgtctccaaagtgagaagcctgaagttggacagtaaagtgtggactgaa
cctttgattctgctatttgtctattatgggaacaaagcagccaatgatgtatggggtcac
aatgtgccgggtgcagagcagatcctgccagactcctctgtggatcagaggggggacttc
atcagggccaagtacaccaagggccgatacagattcacccatcctctagcctccagccaa
cgactgctcaaccagaggctgtgtgaggtggtgtgtggccctaatgtcccagagaccatg
tcattgctgtgctcaggggcccgggtcctgtgccactcaggggactctcagtgccccacg
cccatctccctggcagagcgggctggacaggccatgcagacggagctgcttagacacaac
gaatatacagatgcccctgcctatgttcatcaggtcacagggcctctgctgggcacctct
gaccctccttctgctgcaggagaggaggagctccatgggaagttggaggaggaccgcttc
ctgttctcccaggagaacgactctgcagcctgtgatgttctggacctgagggaggtcatc
tccattttccacagctccaacggatcgactcatgagtttgaaatggtgactctgacggac
gagttggtgtgcaatgccgacactgaagagggtctactgaatcacctgcttcatattctc
agggtggtgttgcccgagcccatagatgaggaggagctggacggggtgtttgctgtgtcc
cgggtgtctctgagggagggaggaggcctgcagcacactgaggtctgggcagtgctccgt
ggaggtcaggtcctcgtctatcctactgaccagcagcgccacagagagaggctaacactc
aaccctgagactcaatacaagatagattcctctgagaacaccatagagctggtcactgga
gagagaaccatgtccatgcagtttgaacgagaccacagctgtcagtcctggcacagccta
ctgaaacgagcagtgaccacaaagaggaagcagcgcccatcactgtacgagctgccaccc
aatgccattggcaatgtgccccctgccattgagaggtgtatctcacacatcacacaatat
ggcctgaaggtggatgggctgtaccggcgctgtggcttggccactaaggtcagcagtctg
gtagaagccctcagcagatcacctaaaactgcccctctggagaaagatgaacagggtctc
ctggacgctgcaggggccctgaagcagtatgtccgccagcaggtggtgctcatccctcag
acacaaagggaactgtgggtcaaggctgcagcccacacagaagagaaccttagactggcc
acctaccgcagactcctgaagaagctgccccctgacaacagaatcacactcaacgccctg
tgtggacacttctacatagttcagctgtacagtgtagagaaccgtatgacagctcagaac
ctggcgctggtgtttgtcccaacactgttccaggagctggccatgaacacaaacatggtg
cgcctcaccagagaactcatcatacaccacacactcatcttcctgggtaaagaacaagag
tctgacatggagagtgaagaactcataacaaaattatag
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